Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->YAB1                                    --------->YAB1                               --------->AHL20(1)                               <---------AHL20(2)                               --------->AHL20(2) ------------->AtSPL8      --------->AHL20(2) --------YAB1             --------->AHL20(2) ----GLK1(2)           --------->AHL20(2)           ---------->DOF2                                 < --TOE1(3)            <---------AHL20(2)         --------->ANAC58        <----------ID1             - --YAB1  <---------ALFIN1 <---------AHL20(2)     --------->ANAC58<-----------GT1  ---------->DOF2  -- --TOE2(3)            --------->AHL20(2)  --------->MYB52(1)     <-----------------AGL1    ----------   tatcgttccccataccctagaaaaataaataaataaaataatcaaaacggtactcaaagcagagatttcacaaatcggacaaaataaagaaactaaagag  16740100                                        <-----------RAV1(2)                           <---------ZAT14                                                     <-----                           <---------ZAT2                                                     <------NtERF2         ----------->GT1   --------->At4g35610                                               ------>NtERF2  <---------YAB1           <---------At4g35610 >>>>>>>>>TBF1                                <-------- ---------ICU4      ------>MYB46(1) <---------At4g35610                --------->LBD16      --------- -------->YAB1      ------>MYB83    --------->At4g35610               --------->HSFB2a(2) <---------- ------->ICU4  <-----------GT1   ---------->DOF2                      <---------HSFB2a(2)--------->O2 >DOF2   <---------ZAT6   --------->ALFIN1 <------ZmHOX2a(1)         <---------LBD16     <---------O2   aattatgaatagagttattaccatccgagtgctgcgaaagctgcaggaagaagaatcacttggagaccaattcccgaacagagaagatgaaacgtcgccg  16740200                                                                  --------->RAP2.3(2)                                                                  --------->DEAR3(1)                                                                  <---------DEAR3(1)                                                                  --------->RAP2.3(3)                                                                  --------->RRTF1(3)                                                                  --------->ANAC46                                                                 --------->DEAR4(2)                                                                 --------->ATERF1(1)                                                                 --------->ERF1                                                            <---------ALFIN1                                                           --------->MYB46(3)                                                         --------->AtMYB61                                                        --------->MYB46(3)                          <                                                  --------->ARR14(2)                                <                                                  <---------ARR14(2)<------NtERF2                   <                                               --------->LBD16  <---------ATERF1(1)               <--                                     <---------ALFIN1   <---------MYB55(2)                  <--------                                  --------->MYB46(3)   ------>MYB46(1)                    <---------ANAC58                                 <------NtERF2--------->HSFB2a(2)--------->ORA47(2)       <---------ANAC58                                 <---------At4g35610   ------>MYB83--------->ABI4(1)     <---------MYB46(3)   <---------ICU4           ------>ZmHOX2a(2)<---------LBD16--------->AtMYB61      <------NtERF2 ---- <-----------GT1        ----------->HVH21   --------->MYB52(1) --------->DEAR3(1) --------->LBD16<--- ----ANAC46       <---------GLK1(2)<---------ALFIN1    -------->P--------->RAP2.3(1)     <------MYB83 -DEAR3(1)    <---------ANAC58  --------->RAP2.6(2)   ------>ZmHOX2a(1)<---------MYB52(1)<------MYB46(1) >DEAR3(1)    <---------ANAC58--------->At4g35610 --------->GLK1(1)------>NtERF2 --------->DEAR3(1)-- -HVH21   <----------DOF2   =================================HOX2a_HOX2a        <---------LBD16  ----   tataaacatttccttttcttgattctgtgatcggcagccactcttctaccggaatcctaccaccatcgccgccgtttttttcgccggagattggttgtgg  16740300             <------MYB83             --------->At4g35610             ----------->GT1             <---------At4g35610             <------MYB46(1)            <---------MYB46(3)           <---------ANAC46        --------->ZAT18       --------->ATERF1(1)     <---------ANAC46   --------->REM1(2)  --------->ALFIN1 <---------LBD16 --------->LBD16 ---------ANAC46                                <---------YAB1 ---------ANAC58                            <---------ANAC58 ---------ANAC58                            <---------ANAC46 ----ZmHOX2a(2)                          <----------DOF2 -MYB46(3)<---------ZAT2              <---------ALFIN1 ----->ARR14(2)          ---------->DOF2 <---------DAG2 ------ARR14(2)----------->HVH21   --------->AtMYB61 ---->ZmHOX2a(2)         --------->MYB52(1) <---------ANAC58 ----->TCP20--------->ALFIN1      --------->MYB46(3)       --------->AHL20(2)                       <   atccgtggagggggctggtgacataaataaaggagaaccaccactttcttgtgattccaaatcaaataagtttcccaatgctatagacattgtatacaaa  16740400                                            --------->ANAC58                                  -------                                       <---------ANAC46                                       <------                                  --------->MYB52(2)                                          <------                                <---------MYB52(1)                                          <--------             ------>ZmHOX2a(1) <----------DOF2                                        <------------CBF         <-----------GT1      ----------->GT1  ----------->RAV1(1)    *TSS        <----------DOF2   <----------DOF2         <---------ATHB12 --------->ANAC58      --------->AHL20(2) --------->ATHB12 -----------GT1   --------->MYB46(3) <-----------GT1              <---------AHL20(2)<---------YAB1   ataaactttattttcctctaacgactccaatcgcgttatttacgtcgagccacaaattgtatggctatataaatgtttactctgctttcattggatttat  16740500                     <---------ANAC46                 <------NtERF2                ------>NtERF2                <---------MYB46(3)               <---------DEAR3(1)              <---------MYB52(1)             <---------ANAC58                                           <<<<<<<<<<GT-3b             <------MYB83 <------------CBF                          <---------RVE1(1)             <---------ANAC58                                       <---------CCA1(1)             <------MYB46(1)                                      ----------->GT1 ----------->GT1--------->MYB55(2)                                <------MYB46(1) -->AHL20(2)--------->MYB46(2)                  --------->HSFB2a(2)<---------ARR11(3) ---AHL20(2)<---------MYB46(3)            <----------DOF2         <------MYB83 -----TBP   --------->MYB55(2)       ------->TEIL          ---------->DOF2 ---TBP     <---------DEAR3(1)  <----------DOF2 <---------HSFB2a(2)--------->ARR11(3)       <--------   atagagtaatttgttcggtggctgtgtatattgactttgaatctctttttccaaaacaaaaaaaaggaaggtatttttcttagggaattgtttttttctg  16740600                                                                     --------->ARR11(3)            <-                                                                     <---------ARR11(3)           ---                                                                     <---------AHL20(2)  <---------ICU4                                                                     --------->AHL20(2)  -------->ATHB1                                                        <---------------AGL15            --------->ATHB12                             --------->ZAT6             --------------->AGL15            --------->ATHB51                        --------->TOE2(3)              ----------------->AGL1    --------->At5g28300-                --------->TOE2(3)                      ----------------->AG     ----------->GT1   ---              --------->GLK1(2)             --------->ARR11(3)       --------->AHL20(1) <---------AHL20(2)              <-----------ARR10             <---------ARR11(3)       <---------AHL20(1) <---------ATHB51    --------->ZAT18     <----------DOF2    <---------CCA1(2)    --------->AHL20(2)      --------->ICU4 ---GT1      <---------GLK1(2) --------->ANAC46      <-----------GT1--------->AHL20(2)  --------->AHL20(2)   tttaagtgctcaagagaatctcaatactttaacactaaacaattcatatctctaattaccatataagaaaatatattctgaacggtagaaattattagct  16740700           --------->YAB1           <---------ICU4          --------->ICU4        --------->TOE2(3)      --------->ICU4     --------->ANAC58     --------->ANAC58                     <---------bZIP60(1)   --------->TGA2(2)                      <---------TGA2(1)  <---------SPL7              <---------TGA2(1) <---------ANAC55(2)          --------->TGA2(1) --------->ANAC55(2)          --------->bZIP60(1) <---------ANAC46             --------->ANAC55(2) <---------ANAC58             <---------ANAC55(2) --------->TGA2(1)            <---------bZIP60(1) <---------ANAC58             <---------ANAC46 --------->bZIP60(1)         ----------->STF1         --------->ARR14(2) <---------bZIP60(1)         <-----------------------TaNAC69(2) <---------TGA2(1)          <---------TGA2(2)         <---------ARR14(2) --------TGA2(2)           ----------->TGA1     <----------DOF2            --------->MYB52(1) -------->TGA1        ---------->DOF2     --------->bZIP60(1)            --------->MYB46(3) ---------->STF1  --------->ANAC58        --------->TGA2(1)    ---------->DOF2----------->GT1 -------->HVH21   --------->ANAC58     <---------MYB52(1)   <---------HSFB2a(2)   atgacgtaagcattaatgacacgagaaagatgacgtaatcggttatgtcactttcaaatactctcgaaagcgagacccatcggtataaatcgaagtcttc  16740800            <---------At4g35610            --------->At4g35610          <--------P                --------->DAG2         <---------MYB52(1)        ---------->DOF2        <------MYB83    --------->ANAC58                <---------ZAT6        <------MYB46(1) --------->ANAC58      ------>MYB83                                        <--       --------->MYB59  --------->ANAC46    <---------MYB59                                    <-----       --------->MYB46(2)  <-----------RAV1(2)------>MYB46(1)        <---------YAB1   <----------DOF2   taattttgttcggtagcttaaaactcaagccaggctaaaaagtaaaccaaactagtttgtgttagattgtgttcattgttcaattggactttgtttgctc  16740900                                       ------>ZmHOX2a(2)                                     <-----------ARR10                ------->GAMYB        --------->ARR11(3)               --------->ANAC58      <---------ARR11(3)               --------->ANAC46      <---------ARR14(2)                    --------->ICU4        <---            <---------WRKY12         --------->ARR14(2)                   --------->ANAC55(2)   -----            <---------WRKY38(1)  --------->At4g35610                      <---------ANAC55(2)  ------            <---------WRKY45<----------DOF2                              <---------ICU4        <-----  <---------TOE1(2)     <---------WRKY38(1)                    --------->ANAC46            --------->AHL20(2)  <---------TOE2(2)     <---------WRKY12   --------->TOE2(3)  <---------REM1(2) --------->WOX13(1) -- -------LBD16  --------->ANAC58  <---------ZAT2    <---------CCA1(2) --------->AHL20(2)    <---------AHL20(2) -----DOF2 --------->WRKY18(1)   <---------At4g35610   <----------DOF2--------->YAB1    ----------->GT1   ttcggatgttttggtcaacgcaagggtcaactttgagctgatcttccttcatcgtctctttgtatacacgattaataagtattaatcaagtagttaatta  16741000  Previous    Next  AGI:  At4g35180.1    Description:  LHT7 (LYS/HIS TRANSPORTER 7); amino acid transmembrane transporter. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT1G47670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47496.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 16738344    to: 16740470    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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