Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->YAB1                              <--------HAHB4                              <---------ICU4                                                  <------                             --------->ICU4                                                   -------                           --------------->AGL15                                         <---------ANAC58                           --------->YAB1<----------ID1                                  <---------ANAC58                           <---------------AGL15                                <---------ATHB12<----                          ----------------->AGL3      ----------->GT1           <---------AHL20(2)                       <---------DAG2  <---------------AtSPL8                   <---------ATHB51-----                       <----------DOF2---------->DOF2------------------------>ANAC81 <-----------RAV1(2)                <---------YAB1--------->ATHB51    --------->DAG2                --------->AHL20(2)---              <-----------GT1<---------YAB1      ---------->DOF2            --------->AHL20(2)<------   tgtttgactaagaaaattacaattacttttcataattagaaaaagaacaaaaaaagtggtaaaaaatagaaccaaaaatcaaataattcaggcgttccag  16693800          ----------------->AGL1       ----------->HVH21       ------->GAMYB      <---------MYB52(2)      --------->MYB46(3)     --------->ZAT2     --------->At4g35610     <---------ZAT2     <---------At4g35610    ------>MYB46(1)                                                                                --    --------->MYB52(1)                                                                          <----    ------>MYB83                                                                              <------  --------->MYB46(3)                                                                          <------  <---------MYB59                                                                ----------->GT1<---- -----RAV1(2)                                                                  ---------->DOF2------- -->HSFB2a(2)              --------->AHL20(2)                         <----------ID1    --------->GLK1(2) -----At4g35610            <---------AHL20(2)                   --------->AHL20(2)      <---------ARR11(3) ---->At4g35610            <---------AHL20(1)           <---------MYB52(2)---------->DOF2     ------- -------->HVH21            --------->AHL20(1)        --------->AHL20(2)<------ZmHOX2a(1)--------->ARR11(3) ---HSFB2a(2)       --------->ZAT14                ----------->GT1   ----------->GT1   --------->RVE1(1)   atgacccaactgaccaattcagtaaacaataaatttcaaatcagagaaaatagaagtaaataaccaaaaaataggaaaaagaaaagaaaaaatctgtgcc  16693900                                                                    --------->AHL20(1)                                                                <---------AHL20(2)                                                               --------->AHL20(2)                                                               <---------AHL20(2)    <---------ICU4                                          <---------ICU4   --------->ICU4                                          --------->ICU4                      <----- ---->NtERF2                                               <---------ATHB51                  -------- -----ANAC58                                          ----------->GT1                       <-------- ---ZAT14                     <-----------GT1       ---------->DOF2 --------->AHL20(2)   --------->YAB1 ---ZAT18                  <---------ICU4        --------->RAP2.6(2)<---------AHL20(2)  <------------ -----ANAC58              --------->ICU4     --------->DAG2<---------AHL20(2)           ------------- -->ZAT18              <---------AHL20(2)   ---------->DOF2--------->AHL20(2)  <---------------AtSPL8 -->ZAT14          ----------->GT1--------->ANAC46<---------RAP2.6(3)   --------->AHL20(2)  ---------   ctgccataattccacttggacttgtataatttttacacattaccgaaaaagccgaaaagaaataattaaataaaataaaaactagtactactaataaaag  16694000      --------->ARR14(2)                                              --------->ANAC46      <---------ARR14(2)                                             ------->TEIL  --------->RAP2.6(3)                         --------->ZAT14    ------->MYC2 --------->MYB52(1)                           <---------ZAT14    <-------MYC2                    ---- -----ID1                       ----------->GT1  <-----------HVH21   --------->SPL7              <--- -->DOF2             ----------->HVH21        <---------ZAT18    <-------MYC3                   <---- -AHL20(2)       --------->RVE1(1)       <---------ARR11(3)      ------->MYC3               --------- ---AGL15       --------->ARR11(3)       --------->ARR11(3)--------->YAB1                 <---------YAB1 -->AGL15       <---------ARR11(3)   ---------->DOF2 <---------ANAC55(2)       <----------DOF2------- >AHL20(2)      --------->GLK1(2)  --------->CCA1(2) --------->ANAC55(2)   <---------MYB52(1)<-------   acaaaacggctctggcaaaatctctgaccttggaaagataaaagatagttcagtcacataatcagcatgtgtacgtcgtttctttagtgcttaatattat  16694100                                     <---------ANAC58                                     <------------CBF                                 <---------ICU4                                 <------------CBF                              --------->YAB1                             <---------AHL20(2)                         --------->AHL20(2)                         <-----------TBP                       <----------DOF2                        ---------->DOF2                    <---------ARR11(3)      <---------At4g35610                    <---------ARR14(2)      --------->At4g35610   <---------TOE2(3)<---------ARR11(1)  <-----------HVH21  ----------->RAV1(1) ----->AHL20(2)     --------->ARR14(2)<---------WOX13(1)   ------>MYB83 ------AHL20(2)    <---------ARR14(1)<---------ANAC58      ------>MYB46(1) -----YAB1         ------>MYB46(1) <---------YAB1  --------->TOE2(3)                             <--- >AHL20(2)         ------>MYB83<---------AHL20(2)  --------->TOE1(3)                     <----------DOF2 -->YAB1           <---------CCA1(2)--------->ATHB12    --------->ANAC46                 <---------DAG2 --YAB1  <---------ANAC55(2)--------->AHL20(2)    <---------ICU4           *TSS  ------>ZmHOX2a(1)   aaattaagaatacttaaaaccaaatctttatataatattgattgtcagataaacattaacccaacaaagtctctctccctctcctattcaactttttcag  16694200                                                                           <---------ANAC58           <-------TEIL    <----------DOF2                 --------->AHL20(1)             --------->AtLEC2          <---------MYB52(1)        <---------ARR14(2)     <---------ARR11(3)      ----------->GT1  --------->ZAT14       <-----------GT1          <----------ID1            <---------ANAC58 <----------DOF2       <<<<<<<<<<GT-3b      <---------ICU4 --------->ARR11(3) <---------ZAT14    <--- <---------DAG2   <---------AHL20(2)--------->ARR14(2)    --------->AHL20(2)  --------->ZAT14 ------- ------MYB52(1) <----------DOF2     <---------GLK1(2)   --------->AHL20(2) <---------ANAC46<-------TEIL   ttactttactccgttcatcttttatttttcttttcgtcgattctcatcaatactacaaaaatatatacttctatatatcgtgcagaggttacatgcattg  16694300                                                          <---------DAG2                 ============                                                          <----------DOF2           ---------->DOF2                                                     <---------ANAC58             --------->At4g35610                            <------ZmHOX2a(2)        <---------ANAC58  <----------DOF2  <---------ARR11(3)                           --------->ARR14(2)   <---------DEAR3(2)   ------>ZmHOX2a(1)  --------->ARR11(3)              --------->LBD16                   <------MYB83  <---------YAB1    --------->YAB1     <-----------RAV1(1)   <---------ARR14(2)   <------MYB46(1)      ===========================HOX2a_HOX2a --------GT1 --------->LBD16==================================HOX2a_HOX2a    --------->WOX13(1) -------->AtSPL8      --------->MYB52(1) --------->YAB1------>ZmHOX2a(1)   <---------YAB1<------ZmHOX2a(2)   tacaattttgttgtcccgagaaacaagcggatcagagacaaaatcagagtcggtttcctgctttttgattcctctttattaatcagcaaagatcgattcc  16694400                                                                                     --------->LBD16                                                                                    <---------HSFB2a(2)                                                                                    --------->HSFB2a(2)                                                                                   <---------LBD16                                                                                 --------->GLK1(2)                                      ----------->GT1                       <<<<<<<<<<E2Fb                            <---------AHL20(2)                             ----------->GT1     ------>ZmHOX2a(1)      --------->AHL20(2)                        <---------ANAC58 ===========HOX2a_HOX2a   <----------DOF2 --------->AHL20(2)          <---------ANAC58   acttctcctctctctctctctctctgttctttaatttagagagaaaaaataagcattcttccttctctgttttcgagcgggaaattctggagatggctat  16694500                                                                                           --------->GLK1(2)                                                   --------->TCP20                        --------->ARR14(2)                                                   --------->TCP15(1)                     <---------GLK1(2)                                                   <---------ARR14(2)                 <--------------                                                   <---------PCF2                    <---------DOF5.7(2)                                                   --------->ARR14(2)              --------->DOF5.7(2)             <-----------GT1                      <------MYB83                    <----------DOF2      <-------GAMYB                               <---------DEAR3(2)             <---------ANAC46      <---------At4g35610                         <------MYB46(1)                <---------ANAC58   -      --------->At4g35610                        <---------MYB46(3)      ----------->RAV1(1)   ------   --------->ZAT18                           <---------AtMYB61 <----------DOF2   <---------ANAC58<---   <---------ZAT18 ------->GAMYB<-----------ARR10--------->MYB55(2)     --------->MYB46(3)<---------ARR14(2)   acaagcgcagttgaattacaacgctccgaatgcgaatcaaatcggttttggtgggtccgagttttctttgatcaacaacaatggcgttatcggaatcggt  16694600                                                  -------->P                                                  ------>MYB83                                                  ------>MYB46(1)                                                ------->GAMYB                                               <---------MYB55(2)                                               --------->MYB46(3)                                 <--                                               <---------MYB52(2)                                 ---  <------ZmHOX2a(2)              <---------HSFB2a(2)                   --------->At4g35610     ------ ---AGL1 <---------CCA1(2)----------------->AGL2--------->AtMYB61   --------->At4g35610 ------->GAMYB ------>GAMYB        --------->YAB1           --------->ANAC46    --------->YAB1     ----------->RAV1(1) --->DOF5.7(2)       <---------ICU4     --------->ARR11(3)        <---------ICU4    --------->MYB46(3) ------DOF5.7(2)    <---------ATHB12    <---------ARR11(3)     --------->YAB1    --------->MYB46(3) -   aacgatcagtcttatcttgtcaataatctccagttgcagaaagatttcaaccaacatgctctgtttcatcatcagcatcatcaacaacaacagtctcctt  16694700  Previous    Next  AGI:  At4g35070.1    Description:  similar to SBP1 (S-RIBONUCLEASE BINDING PROTEIN 1), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G45976.1); similar to unknown [Populus trichocarpa] (GB:ABK93023.1); contains InterPro domain S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066) Range:  from: 16694175    to: 16695703    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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