Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <----------DOF2                                                             <---------------AGL15                                <---------MYB52(1)           --------------->AGL15                               --------->LBD16              ----------------->AGL1                       <---------MYB46(3)                  ---------->ID1                <---------GLK1(1)                          <-----------GT1                --------->GLK1(1)                    <----------DOF2           <---------LBD16    --------->LBD16        <---------DAG2          --------->MYB52(1)  --------->ANAC46  <---------MYB46(2)<---------ANAC58    --------->WRKY12------------>AtMYB77        <---------MYB52(2)<---------ANAC58    --------->WRKY38(1)<---------DEAR3(2)       <------------MYB.PH3(2)  <----------DOF2  --------->ETT(2)             <---------MYB111(1) -----ARR14(2) --------->ARR14(2)      <-----------GT1    <-----------GT1 ---->ARR14(2) <---------ARR14(2)<----------DOF2<---------MYB59   <---------ANAC46 --->GLK1(1) --------->LBD16 <---------LBD16    <---------MYB111(2) ----------->GT1   tcccctttgactcaccggatatcgacggtttcccgctattttttcccctaactaactttttttccttttcttgtaaaactcttaaaaacaaaactcggtg  16675700                                                                    --------->ANAC55(1)                                                                    --------->ANAC46                                             =====================bZIP_DOF                                             <----------DOF2        --------->ANAC55(2)                                          <---------ALFIN1          --------->ANAC58                                        ----------->RAV1(1)         --------->ANAC58           <-----                                       --------->ANAC46             <---------ANAC55(2)  <------MYB83                                       --------->DEAR3(1)          --------->SPL7        <------MYB46(1)                                       --------->DREB2C(2)         <---------TOE2(2)    <---------AtMYB61                                       ----------->HVH21<---------TGA1a                 --------->MYB59                                       --------->At1g77200         <---------TOE1(2)    --------->MYB111(1)                         =========================================bZIP_DOF             <--------P                         <----------DOF2------>NtERF2   ========================================MYC_MYB                    <----------DOF2    --------->RAP2.3(3)       <---------SPL7        <---------MYB55(1)             <---------ZAT18           --------->DEAR4(1)      --------------->AtSPL3 <---------MYB52(1)           --------->At4g35610         <---------ETT(1) --------->TGA1a            ------>ZmHOX2a(2)           <---------At4g35610        --------->RAP2.3(1)      <---------------AtSPL3--------->LBD16    <----------DOF2 ==============================================bZIP_DOF         <---------LBD16 <-   ttgtctctttgtttgctcactccttttctttctctctctcgccgacactttcattctcacttgtgttcgtacgtaatgttcttgatccggtaggttttta  16675800                                                                                   <---------ANAC58   --------->YAB1                                                        <------ZmHOX2a(2)       <---  <---------YAB1                                                        --------->ARR11(3)       ---- ----AHL20(2)             <------------CBF  <---------YAB1              <---------ARR11(3)      <---- --------AHL20(2)    <-----------GT1<---------CCA1(2)       <---------YAB1         <---------ANAC58   tttgattataaactcatttcatttaacaaattgagtccatctctctatgattcacccataagatgatagaagaagatcaacatttacgtctgagataaat  16675900                                                                                                  <--                                                                                              <------                                                                                           --------->ARR11(3)                                                                                           <---------ARR14(2)                                                                                           <---------ARR11(3)                                                                                           --------->ARR14(2)                                                                                         ----------->ARR10                                                                                       <------NtERF2                                                                                       <---------At4g35610                                                                                      ------>NtERF2                                                                                      <---------RAP2.3(1)                                            <----------DOF2                          <---------DEAR3(1)                                           ------>ZmHOX2a(2)                         <---------RAP2.3(2)                                    --------->YAB1                                   <---------ANAC46        <---------TOE2(3)          <---------ATHB12                                  --------->ATERF1(2)    <----------DOF2              --------->WOX13(1)                                  <---------ATERF1(2)    ------>ZmHOX2a(1)          --------->WRKY18(1)                                   <---------RAP2.6(2) ------ICU4                    ------------>CBF         ------------>AtMYB77         <---------RAP2.3(3) ----->YAB1          <---------AHL20(2)  <---------ARR11(3)  --------->ARR14(2)     --------->RAP2.6(3) -----ATHB12------->TEIL <-----------GT1 --------->ARR11(3)  <---------ARR14(2)<-------TEIL<---------GLK1(2)   catgtcctttaatgtatatttgtttattttctggtcaatcatcgatctttcttagtcgtagcagttacacaatgctgatggtacatggcggcagattttc  16676000                           -------->HAHB4                           --------->YAB1                       <---------AHL20(2)                       --------->AHL20(2)                      --------->AHL20(2)                                      <---------YAB1                      --------->AHL20(1)                                   --------->ICU4                      <---------AHL20(2)                              --------->LBD16           ---------->DOF2<---------YAB1                            <---------LBD16          <---------AHL20(2)                                   <---------ANAC58      --------->AHL20(2)--------->YAB1                         <---------ANAC58     <---------YAB1------>MYB46(1)                           <---------ARR11(3)       <---------CCA1(2)  <---------YAB1   ------>MYB83                              --------->ARR11(3) <------------CBF  --- -------GLK1(2)  <---------MYB59                         --------->ZAT6<---------MYB52(1)    -------- -----GT1 --------->AHL20(2)        ------->TEIL         <-----------GT1 ---------->DOF2  <----------DOF2   gattcttattatttaaagaccaaatttaataatagatgtatgtacaacgagttttggtatcactatcttgtccggtaatgctcattgtttatcttttaaa  16676100                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                         <---------ANAC55(2)                             *TSS                                        <---------ANAC46                            <---------ATHB12                          <---------MYB52(1)   --------->ARR11(3)                  <---------WOX13(1)                              ------>ZmHOX2a(1) ---------->DOF2 --------->ANAC46<------------CBF                            --------->GLK1(1)   <---------At4g35610 ------>TOE2(2) --------->ATHB51                             <---------GLK1(1)   --------->At4g35610 ->AHL20(2)     --------->ATHB12             <------------------------ANAC81    ----------->RAV1(1)   tctacgtcttcttctgcataattgacacaaatcacttgtttcaatggagtttttgtttgtttgatttcctctgttacttatgcagcaaaagaagaaattg  16676200                                      <---------ANAC46              <------ZmHOX2a(2)                                     <---------MYB46(3)            --------->ARR11(3)                               <------ZmHOX2a(1)            <---------LBD16                            <---------LBD16         =======================HOX2a_HOX2a                        --------->HSFC1(2)          <------ZmHOX2a(1)            --------->ALFIN1<-----------RAV1(2)    ----------->GT1 <---------ARR11(3)  ---------->DOF2       <---------HSFC1(2)    ---------->DOF2  <------ZmHOX2a(1)                <----   agtttaaaggagaagtgtgagaaggaagtttcaggaagatgggtgaagaaaagaggagaatttcaggaagatcagtttcacttccatcgatagacatatt  16676300                                                                                --------->DAG2                                                                               ---------->DOF2                                                                            --------->ANAC58                          <---------------AGL15                             --------->ANAC46                          --------------->AGL15                         --------->ANAC58                 <------MYB83---------->DOF2                            <---------ALFIN1          ---                 <------MYB46(1)                                        --------->ANAC58     <-------               <--------P--------->TOE2(3)                  --------->ZAT18 --------->ANAC58 <------- -------GT1<-----------RAV1(2)                    --------->AtMYB61    <---------ZAT18    <---------MYB46(3)   actagacgagaaaccaggttggccatttcttaaaagagcaagtttagggacaccacaacaagttcacaaatggcacacacgaaaagtctcagtggtcaat  16676400              ----------->HVH21             --------->TOE2(3)       <---------At4g35610           ------->GAMYB       --------->At4g35610          --------->MYB46(3)           ---------->DOF2 ------>MYB59--------->TOE1(3)--------->YAB1             --------->ANAC58        <------ZmHOX2a(1) --WRKY12  -------->P        <---------ATHB12       <----------ID1   <----------ID1 --WRKY38(1)----------->RAV1(2)    --------->At4g35610   --------->ANAC58   <---------ATHB12       --   tgggtcatgagcttacctgaacggtttccaaatcatcaacagactctaaactatgagacaagcttgataaagaaacaaatcaaggacatattgagagaca  16676500                                           <---------GLK1(1)                                           --------->GLK1(1)                                    --------->REM1(1)                                  ----------->RAV1(1)                               --------->ANAC58                                     ------>ZmHOX2a(1)                               --------->ANAC58                             <---------At4g35610      ----------->GT1        ---------->DOF2                          <-----------GT1 ------->YAB1               <------ZmHOX2a(1)                 <---------MYB52(1)  ----------->RAV1(2)   ataacaaatggttcaactacaatgttcttaggaaagcaacatcagatttctctcaaggtactctgttttttttttctctgcttctcctgatgagtttgta  16676600  Previous    Next  AGI:  At4g35025.1    Description:  unknown protein Range:  from: 16675533    to: 16675754    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g35030.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G16750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47381.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 16676129    to: 16678118    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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