Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->AHL20(2)                                                  <---------AHL20(2)                                                 --------->YAB1                                           <------MYB83                                           <---------MYB46(3)                                           ----------->GT1                                       --------->ATHB12                                      <---------YAB1                                     --------->LBD16                                    <---------ANAC58                                    <---------ANAC58     --------->AHL20(2)    <---------STY1(2)    --------->ANAC58  <------MYB46(1)<---------AHL20(2)    --------->STY1(2)    --------->ANAC58<---------WOX13(1)         --------->TOE1(3) -------ATHB12      --------->DAG2  <---------ANAC46 --------->AHL20(1)       --------->ANAC55(2) -->WRKY18(1)     ---------->DOF2 <---------At5g28300<---------AHL20(1)     <---------DOF5.7(2) ->At5g28300   <-------TEIL  <----------DOF2    <---------YAB1      --------->TOE2(3)              --   ataactagctagacagattcaaaaggtaagcctttataccgtgattggttataaaaatattaaatattgaccttaagttcacgttttttttagtgtctca  16672500                                    <---------ICU4                            <---------ANAC55(2)                                   --------->ICU4                <---------YAB1                                  <---------TOE2(3)           <---------AHL20(1)                         <-------TEIL                         --------->AHL20(1)                -----           --------->HSFB2a(2)  <---------AHL20(2)           --------->YAB1   --------->ANAC55(2)           <---------HSFB2a(2) <---------YAB1        --------->LBD16          --------->ANAC55(1)   -  --------->AHL20(2)     ------->TEIL               <---------LBD16       <-----------GT1    --------  <---------AHL20(2) --------------->AtSPL8        <---------LBD16--------->YAB1             <------- ------->TOE2(3)     <---------------AtSPL8       --------->MYB52(1)<---------YAB1        --------->GLK1(2)   acatttatttcttagagaagttgtatgtacatttttaatgtttacttcaacataccgggacaaaaatattatcatttaacatgtaacagaagaatatgta  16672600                            --------->ANAC46                            --------->ANAC58                            --------->ANAC58       <---------At4g35610--------->ZAT6                                      <-----------GT1 -->TEIL                <-----------GT1      ----------->GT1     <---------AHL20(2) --------->DOF2    --------->ICU4 <---------ATHB12               <---------YAB1                  ---- ->ANAC55(2)     --------->YAB1 --------->WOX13(1)           <---------AHL20(2)  --------->TOE2(3)<-- --ANAC55(2)     --------->AHL20(2)--------->YAB1      --------->At4g35610  <---------AHL20(2) ------   tccaaaggaggctgatcaataaaaattaacactccaatcatattgcattgtaaaaccagctatattttttattgatatttaaaccatagttgtataatcc  16672700                                                                       >>>>>>>>>RAP2.2                                                             ---------->DOF2                                                 <---------YAB1        --------->YAB1                                                 <---------AHL20(2) --------->WOX13(1)                   ------>ZmHOX2a(1)          <---------AHL20(2)  <------ZmHOX2a(2)               <---------ARR11(3)             --------->AHL20(1) --------->ARR11(3)      --------->MYB52(1)      --------->YAB1  --------->AHL20(2) <---------ARR11(3) -->ZmHOX2a(1) --------->ARR11(3)          XXXXXXXXXXXXXXXXXXXX>MIR776 --------->TOE2(3) -------ICU4   <---------ARR14(2)      --------->At4g35610  <---------AHL20(2)                      < --->YAB1      --------->ARR14(2)      <---------At4g35610  --------->AHL20(2)                      -   taatgacacatcggaaaaatcctctaaaccagtcaaaatttagctaaattttttattgatatttaaagatcaatctaaatatgtatagatttaggcattt  16672800                                                                           <---------AHL20(1)                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                          --------->YAB1                                                                       --------->YAB1                                                                       <---------ICU4                                                                      --------->ICU4                                                                    -------->ATHB1                                                                   <---------AHL20(2)                                                                   --------->ICU4<-----------GT1                                                                   <---------ATHB51                                                                   --------->AHL20(2)               <---------ZAT6                             <-------TEIL<---------YAB1         <------NtERF2                                --------->DAG2--------->YAB1      --------->At4g35610                             <---------------AtSPL8<---------YAB1 ---------ARR14(2)                                   ---------->DOF2<---------ICU4 -------->ARR14(2)  --------->At4g35610xxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------YAB1    --------->AHL20(2)   agtatatgggctgcatagtattagatgaaaacgaagtttaaaaaaaaaaaaaaaaaaaagtacatagaaattattattataattttcatcccataaattt  16672900                                                   <---------AHL20(2)                     --------->ZAT18              --------->AHL20(2)                    --------->ANAC58          <---------AHL20(2)                    --------->ANAC58    *TSS --------->AHL20(2)     ----------->GT1          --------                 --------->ARR14(2) <---------ARR14(2)         ---------->DOF2     >>>>>>>>>TBF1          <-----------RAV1(1)       --------->ARR14(2)    ----------->GT1  ---------->DOF2   --------   ttgtagggtcttatgttgggaaacgcactatctaagaagaaatgctattttataaaattttagtaaaaagaagaaaaaaaaggaagaagaagaccaagaa  16673000                                                                                               ------              <------ZmHOX2a(1)                                                               -------      <---------ANAC58                                                                        <------      <---------ANAC58                                          --------->At4g35610  --------------->AGL15     <-------TEIL                <------ZmHOX2a(1)              <---------At4g35610  <---------------AGL15    --------->ALFIN1           --------->MYB59               <---------At4g35610    <---------------- <---------TOE2(3)         <---------ICU4                    --------->At4g35610 <----------DOF2 ->ANAC58------->MYC3     --------->ICU4                <----------DOF2     ---------->ID1---------->DOF2 ->ANAC58<-------MYC3----------->GT1          <---------HSFB2a(2)       <----------DOF2<----------DOF2   attgaggtgcatgtgaggatgagtagtaaaaattaggaagactctagtctgggagagactttcagcagctatttctttgtcttctttctctttaaagaac  16673100                                 <---------ANAC58                                        <---------TOE1(3) ->TEIL                          <---------ANAC46                               <---------ANAC58 -->ARR14(2)                     <---------ANAC58                               <---------ANAC58 ---GLK1(2)            --------->ARR14(2)     <---------TOE2(3)          ---------->DOF2 <---------TOE2(3) -AGL3      <----------DOF2--------->LBD16    <---------TOE1(3)     <------ZmHOX2a(1)<----------DOF2   ctcactctctctctctttagtcaaaaatccccaattcgtgaacaaattagggtttttgaagtttgaagaaggagagaaagatgagtgcttcaaggtttat  16673200                         <-------GAMYB                        <-----------RAV1(1)                        <---------MYB46(3)                      --------->ABI4(2)                  <---------DEAR3(1)                 <------NtERF2                ------>NtERF2                <---------ATERF1(1)               --------->DEAR3(1)               <---------DEAR3(1)               ----------->HVH21              --------->RAP2.3(1)              <------NtERF2              --------->ATERF1(1)             <---------ATERF1(1)             <---------ERF1             <---------RAP2.3(1)            <---------RAP2.3(3)            <---------DEAR3(1)            <---------DREB2C(2)                                <---------ALFIN1            <---------DEAR4(1)                               ----------->RAV1(1)            --------->ETT(1)                              --------->ANAC58            <---------TOE2(3)            <---------At1g77200                           --------->ANAC58           ---------->DOF2          <-----------HVH21                           --------->ZAT6         <---------MYB52(1)         <-----------RAV1(1)                          --------->REM1(1)     <-------GAMYB--------->ARR11(3)    <-----------HVH21--------->ALFIN1               ------>ZmHOX2a(1)   <---------ALFIN1 <---------ARR11(3) --------->ALFIN1--------->ATERF1(1)           <---------At4g35610<----------DOF2 <----------DOF2<---   caagtgtgtcactgtcggcgacggtgctgttggaaagacttgtcttctcatctcctacactagcaacactttccccacggttagctttaaagttctcttc  16673300           <---------ANAC58                                                           <------MYB83           <---------ANAC46         <------MYB46(1)                                   <------MYB46(1)           <---------ANAC55(2)      <------MYB83                                     --------->MYB59           ----------->GT1 <------MYB83                 <---------YAB1             <<<<<<<<<MYB98           <---------ANAC58<------MYB46(1)     <---------REM1(1)                   <---------MYB52(1)   <----------DOF2      <---------ANAC58    <---------MYB46(3)             --------->ANAC58    ------ -------DOF2            <---------ANAC58 <-----------RAV1(1)               --------->ANAC58 ---------   ttttactttgatttcgtgaaattttagcttggtgaagttggttttgttgttgaagcttatgagttggatttagtcacaagtatttgttaggttttcttaa  16673400  Previous    Next  AGI:  At4g35020.1    Description:  ARAC3/ATROP6/RHO1PS/ROP6 (rho-related protein from plants 6); GTP binding / GTPase. Identical to Rac-like GTP-binding protein ARAC3 precursor (ARAC3) [Arabidopsis Thaliana] (GB:Q38912;GB:P92989;GB:Q84W42); similar to ATGP3/ATROP4 (RHO-LIKE GTP BINDING PROTEIN 4), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT1G75840.1); similar to rac-like small GTP binding protein [Brassica rapa] (GB:AAB97458.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (Inte Range:  from: 16672940    to: 16674776    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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