Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------ALFIN1  <---------ZAT14                 --------->ETT(2)  --------->ZAT18                 <---------WRKY12  <---------ZAT18                --------->TCP16(2) -------->ZAT18                <------MYB83 ---------ZAT18               --------->MYB59              <---------TOE1(2) -------->ZAT14             <---------MYB52(1)             <---------TOE2(2) ---------ZAT14  <---------YAB1<------MYB46(1)          --------->ATHB12 ----YAB1        ------>ZmHOX2a(1)<-------TEIL         <---------YAB1                      <---------   agtgtgctcttcttcgttcctgatagagccattaggtccaccggtcttcgattgagcatcataggttccagcatcgtgccatcttcataaaaaccagatg  16667300                                                                  <---------ALFIN1                                                               ------>ZmHOX2a(2)                                                              --------->GLK1(1)                                                              <------ZmHOX2a(2)            ------->GAMYB                                                             <---------ARR11(3)   --------->GLK1(2)                                                             --------->ARR11(3)  <---------GLK1(1)                                                          --------->SPL7      --------->ANAC58<------                                                          <---------TOE1(2)   --------->ANAC58<------    <---------ICU4                                      --------->TOE1(2)   --------->MYB52(1)<------ --RAV1(2)                --------->YAB1    <---------MYB59--------->HSFB2a(1)--------->ANAC46-------   atacaaacatttcaacattcaaaaacaaacaaaatcgattctacagcctaactacaatcgaacgatctccacatgaataaacgaaatctgtaacagtcaa  16667400                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                    ----------->HVH21                                                                                  <---------At4g35610                                                                                  --------->At4g35610                                            --------->ATHB12                      --------->ZAT2            --------->ANAC58               <---------YAB1                         --------->GLK1(1) ---WRKY38(1)   --------->GLK1(1) --------->MYB52(1)                              <---------ZAT2 ---ZAT18   --------->ANAC58 --------->ANAC58                     --------->HSFB2a(2)  --------->ANAC46 ---WRKY12--------->TOE1(2)  --------->ANAC58            --------->ARR11(3) --------->MYB52(1) ------ -->ZAT14 --------->TOE2(2)  --------->ANAC46    <------ZmHOX2a(1)<---------HSFB2a(2)--------->MYB52(1)   ctcgacgaaaaaccaaggaaatcgaaaacttacgccaatcggagcatgataggagcacagttcttgttcgcgatgagagaacggagctcacggcgagcct  16667500                                      ------>NtERF2                                   <---------ZAT14                        ---------->DOF2                                   --------->ZAT14            <---------GLK1(1)       <----------DOF2             --------->ABI4(2)         --------->ARR14(2)    ------>ZmHOX2a(2)        --------->MYB52(1)              <---------ARR14(2)                     -  --------->ARR11(3)       --------->MYB46(3)    ------>ZmHOX2a(1)     >>>>>>>>>TBF1               <-  <---------ARR11(3)--------->LBD16<---------ZAT18          <------ZmHOX2a(1)              --------->ANAC58 --->TOE2(3)      <---------LBD16 --------->ALFIN1        <---------TOE2(3)                --------->ANAC58   tagtgatctctttcaagtactccgcatcaacaatcggtgcagccatagctcctactcgtttaggatttgtgaagaagaaagagagcgatgaacaagaaaa  16667600                                                                         --------->CCA1(2)                   <---------CCA1(1)                                 --------->YAB1                  <---------GLK1(2)                             <---------MYB55(2)                  --------->ARR11(3)                            --------->MYB46(3)            -------         --------->ALFIN1                                      ------>MYB46(1)                <------         <---------ANAC58                                      ------>MYB83                  --------         <---------ANAC58                                      --------->ANAC58             <------NtERF2         <---------ANAC46                                      --------->ANAC46            <---------DEAR3(2)   <---------TOE2(3)       <---------MYB46(3)   ---------->DOF2--------->ANAC58           <---------DEAR3(1) <---------WRKY12 <---------ARR11(3)        <----------ID1   --------->AtMYB61 <---------ARR14(2)  <- <---------WRKY38(1) <---------AHL20(2) >>>>>>>>>CBP60g     --------->MYB46(3) --------->ARR14(2) <-- -------->WRKY18(1)<---------RVE1(1)    >>>>>>>>>SARD1    <-----------GT1--------->MYB52(1)<---------ATERF1(1) ----------HVH21----------->ARR10 --------->ANAC46  ----------->GT1 <---------ATHB12     <---------ABI4(1)   tggtcaaggatgtgtgtgaagattttttttggttacaccgaaatttgggccaaagagataaaaccacccaatgagaaacgggatttgaatgggcggtgtc  16667700                                                                     <-------PIF5                                                                     <-------MYC2                                                                     ------->PIF5                                                                     ------->MYC4                                                                     <-------MYC4                                                                     ------->MYC2                                                                     ------->MYC3                                                                     <-------PIF4                                                                     ------->PIF4                                                                     <-------MYC3                                                                    <---------TGA1a                                                                    <---------O2                                                                    --------->bZIP60(2)                                                                    --------->ANAC58                                                                    --------->TGA1a                                                                    --------->O2                                                                    --------->ANAC46                                                            <---------MYB46(3)                                                          <------------CBF                                                          >>>>>>>>>ARR2                                                          >>>>>>>>>ARR1      <---------ANAC58                                                       <-------TEIL --------->ANAC58                                                      --------->ARR14(1)     <---------AtLEC2                                   ------->TEIL       --------->CCA1(2)      <---------ANAC58                       *TSS   <---------ANAC46================================bZIP_DOF                       <---------ARR11(3)     <----------DOF2       <---------ANAC55(2)                      <---------ALFIN1       <---------ANAC58       --------->ANAC55(2)       ------>ZmHOX2a(1)  <----------DOF2    <---------ANAC58     <------------OsbHLH66 ----->AtMYB77      <---------ALFIN1    <------------CBF<---------YAB1----------->HVH21 -----HVH21         ----------->RAV1(1)--------->ATHB12----------------------->TaNAC69(2) ->ALFIN1      ------>ZmHOX2a(1) <---------ETT(2)    <---------ARR14(2)  <---------ANAC58           - --------MYB52(1)--------->ANAC46--------->WRKY12    --------->ARR11(1)  <---------ANAC46          -- -----GAMYB   --------->TOE2(3) --------->ALFIN1     --------->ARR14(2)  <---------ANAC58     -------   agttatctcctgttttcctcagccacatctttcggtggacctcattggctttttagatacgattgttggcacgtgacttgcatgtcattttgttacacaa  16667800                                                  --------->TOE1(3)                                              --------->KAN4(2)                                            <-------TEIL --------->ANAC58                     <-------TEIL--------->TOE2(3)                                 < --------->ANAC58                   <---------ZAT18                                                -- --------->ANAC46                  <---------ANAC58                                               --- -------->RAP2.6(3)                <---------ANAC58                ----------->GT1                <-- ------->MYB52(1)                  <---------ANAC46------>ZmHOX2a(1)             <---------AHL20(2)-- -->ANAC46           <---------AHL20(2)<---------AtLEC2    ----------->GT1      --------->YAB1    <--   aaaacggcacacgagtttgctagttatttgttaaacagcgtgcatgttcattccttaaattttgtaaaatggaaacattgaataaaaatggacataaacc  16667900                                         --------->AHL20(1)          <---------MYB52(1)             <---------AHL20(1)         --------->LBD16                 <---------AHL20(2)       <---------LBD16                   --------->ARR11(3)     <-----------GT1             --------->ARR14(2) <---------YAB1                  <---------ARR14(2) ---------AHL20(1)            --------->YAB1 ------->ATHB51          --------->HSFB2a(2)                                               --------->ANAC58 ------>ICU4             <---------HSFB2a(2) <-----------GT1                               --------->ANAC58 -------MYB52(1)        <---------LBD16  <---------ARR11(3)    <---------AHL20(2)          <--------- ------->AHL20(2)<---------TOE2(3)       --------->AHL20(2)<---------ZAT6             --------->YAB1 -------YAB1  <----------DOF2<------ZmHOX2a(2)             ----------->GT1  --------->AHL20(2)   attattttttccggtgatttatgttttctggatcatattcgaatatattactcgtgtattagagttaaattgaagaaatcaaatacaaacagaacgacaa  16668000                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                <----                                                                                                -----               <----------DOF2                                                              ---------            <---------ALFIN1                                        <-----------GT1         ---------       <-----------GT1                                            --------->CCA1(2)         ---------    --------->bZIP60(1)                        ------->TEIL    <---------YAB1       <<<<<<<<<TBF1   < -ID1<-----------HVH21             --------->ANAC46  --------->ANAC55(2)        --------->ARR14(2)<--   aaatcgatgtcacaacactttgaaattggtctactaaacacaatacatgaaccatatgtaatgtgatgatatacactcttcagttcttcttcccacgacc  16668100           --------->ANAC58           --------->ANAC46     <---------ANAC58     <---------ANAC58 -------->O2 -------->TGA1a ---------TGA1a                                                 <-------MYC3 -----ALFIN1                                                    ------->MYC2 ---->AtMYB61     --------->YAB1                                <-------MYC2 >MYB46(3) --------->ANAC58                                     ------->MYC3                    <---- >ANAC58  <---------LBD16                            <---------ANAC58             XXXXXXXXXXXXXXXXXXX >ANAC58 <---------AtLEC2                            <---------ANAC58        <---------LBD16  <------ ---------O2    --------->ANAC58              ------>ZmHOX2a(1)<---------ANAC58  --------->ARR14(2) -------ALFIN1  --------->ANAC58          ------->TEIL         <---------ANAC58--------->LBD16-------   acacttgacttgcacggcaagcatcttcacaacgttcttacatgaatccttcttgtcttgttgaaacgtgctcttgttcaccggaatcacacattcagct  16668200  Previous    Next  AGI:  At4g35000.1    Description:  APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase. Identical to L-ascorbate peroxidase 3, peroxisomal precursor (APX3) [Arabidopsis Thaliana] (GB:Q42564;GB:O81810); similar to APX5, L-ascorbate peroxidase/ peroxidase [Arabidopsis thaliana] (TAIR:AT4G35970.1); similar to ascorbate peroxidase (GB:AAB52954.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Plant ascorbate peroxidase; (InterPro:IPR002207); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 16664827    to: 16667723    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g35010.1    Description:  BGAL11 (beta-galactosidase 11); beta-galactosidase. Identical to Beta-galactosidase 11 precursor (BGAL11) [Arabidopsis Thaliana] (GB:Q9SCV1;GB:O49609); similar to BGAL16 (BETA-GALACTOSIDASE 16), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT1G77410.1); similar to BGAL14 (beta-galactosidase 14), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G38590.1); similar to BGAL13 (beta-galactosidase 13), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G16730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47377.1); similar to beta-galactosidase [Gossypium hirsutum] (GB:AAS76480.1); similar to putative beta-galactosidase [Nicot Range:  from: 16667935    to: 16672097    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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