Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------YAB1                                                                         <---------AHL20(1)                                                                         <---------AHL20(2)                                                         ---------->DOF2 --------->AHL20(2)                                               <---------MYB52(1)     --------->AHL20(1)                  ----------->GT1              --------->DOF5.7(2)  --------->ARR11(3)                 ----------->GT1              --------->TOE2(3)     <---------ARR11(3)                --------->ANAC58 --------->ANAC58     ----------->GT1 <---------AHL20(1)                --------->ANAC58 --------->ANAC58     <------MYB46(1) --------->AHL20(2) ------ICU4    <---------LBD16<---------At4g35610     <------MYB83  --------->AHL20(1)      <-------- ----->YAB1 --------->ANAC58  --------->At4g35610    --------->MYB59<---------AHL20(1)  <---------ANAC55(2) -----YAB1  --------->ANAC46  --------->ZAT2  --------->TOE1(3)  >>>>>>>>>>GT-3b        --------->ANAC55(1) ---->ICU4  --------->ANAC58  <---------ZAT2 ----------->GT1  ----------->GT1           --------->ANAC55(2)   tataacattggtacacgcacgggaaaaaacacagctagcaaattgaaacgttaatttggtaaagaagaaaaatattttatttttaaaaacacttaatata  16653300                                                                                                    -                                                                                                 ----                                                                                                 ----              <-----------GT1                                                                    ----             <-----------GT1                                                                 <-------    <---------WOX13(1)                                                                    --------->YAB1  --------->ATHB12                                                                        <---------ICU4 <---------YAB1<-----------------AGL1  --------->YAB1                                    <---------AHL20(2) <---------AHL20(2)                   <---------YAB1                 <---------YAB1      --------->AHL20(2) -YAB1----------->GT1               --------->YAB1                <-----------GT1      --------->TOE2(3)   gttttaattggtgattttcccaattctgaacatatatatgatgataagttttccatcccaagttgttttttctcattagtcactggaaacattaattacc  16653400                                                         --------------->AtSPL3                                                         --------------->AtSPL8                                                         <---------------AtSPL8                                                         <---------------AtSPL3                                                      <---------ICU4       <---------MYB46(3)                            --------->ICU4   --------->YAB1                                  <---------ICU4  --------->ICU4           --------->ANAC46       <---------ATHB51  <---------ATHB12         --------->ANAC58       --------->ICU4 -------->WOX13(1)         --------->ANAC58       <---------AHL20(2)                                - ----->ANAC58            ----------->RAV1(1)      --------->AHL20(2)                               -- ----->ANAC46            <---------ALFIN1  ---------->DOF2                                   -------- ----->ANAC58           --------->ANAC46 <---------AHL20(2)                       <-----------GT1  <- ----GT1     <----------DOF2            --------->AHL20(2)           <---------YAB1       --------->AHL20(2)   agcaatcagtagttactttggtattccccacacaaattcaaatttaaaagaaataattagtagtacttcttatgactgttttttttactgaataaaaaag  16653500                                                               >>>>>>>>>>GT-3b                                                            ----------->GT1                                                            <----------ID1                                                 --------->AHL20(2)                                                 --------->AHL20(1)                            ------       <---------TOE2(3)                         <---------AHL20(1)                 --------->AHL20(2) -------------->AGL15                            <---------AHL20(2)  --------->CCA1(2)     <--------- --------------->AGL3     --------->MYB46(3)    --------->AHL20(2) --------->AHL20(2)  <---------AHL20(1) -->DOF2   <---------MYB46(3)        --------->DAG2       ---------->DOF2        <----------DOF2 ----------------AGL3--------->YAB1---------->DOF2<---------AHL20(2)--------->AHL20(1) --------->AHL20(1)   aactatatataggttgttcttaactataaccactaaaaaaaggttctaaaattaattttaaaaagaaaaatatatgaagttaacttttatatattacaca  16653600                                      <---------TOE2(3)                                     ---------->DOF2                                 <--------HAHB4                                                   ---                                 <---------ICU4                                                   <--                                 -------->HAHB4                                                  <---                                 <--------ATHB1                                            --------->ZAT14                                 --------->ATHB51                                          <---------ZAT14                                --------->ICU4                                         ------>MYB83--                                <---------ATHB51                                     --------->MYB46(3)                           <------MYB46(1)                                           --------->AtMYB61                           <------MYB83                                              <---------MYB111(1)                   ----------->GT1  --------->AHL20(2)                               <---------MYB46(2)                   <------MYB83 <---------------AGL15   --------->ATHB12             <---------MYB111(2)                   <------MYB46(1) <---------YAB1       <--------ATHB1              --------->ANAC46                  <---------MYB46(3)<---------AHL20(2) --------->ICU4            --------->ZAT18 ----                 <---------ANAC46--------->YAB1        <---------ATHB12 --------->AHL20(2) --------->ZAT18           <-----------RAV1(2)  <---------YAB1     ------------>CBF     <-----------TBP------>MYB46(1) --->ANAC46<---------LBD16 ----------->GT1   ------------>CBF         <----------DOF2<---------MYB55(2) --GT1   <-----------HVH21--------->MYB59<---------GLK1(2)   <-----------GT1     <---------ZAT18-----   tcaaattccaatttcaggggctggtaatttggtaataattaaagaaactcaatggcaatgatttaagcacttctttatataagtccaccaaactacactg  16653700              <---------ALFIN1            <---------ALFIN1          <---------ALFIN1          --------->AtMYB61         *TSS --------->ANAC46         --------->ANAC46       --------->ANAC46   ------>ZmHOX2a(1)                    --------->ANAC58                                  <----------DOF2  --------->ANAC46                      --------->ANAC58                                 <---------ANAC58 ------>GLK1(1)                         --------->ANAC46                                 <---------ANAC58 -------GLK1(1)                      <---------REM1(2)                          --------->ZAT18 ------ARR11(3)                      --------->ZAT14                            <---------ZAT18     - ---->ZmHOX2a(2)            --------->DAG2        --------->MYB52(1)          --------->At4g35610   - ----->ARR11(3) --------->ANAC46     <---------ZAT14  ---------->DOF2         <---------At4g35610  -- ---->ZAT14--------->ZAT14 ---------->DOF2--------->YAB1                 <---------YAB1  <---------ANAC46   atctcctcaacaccacacacagcaaaacaaaaagctctctacactcaaaatataacgaaagaacaagaagacatcatcttagctcactatggctttgaag  16653800                                                                           ----------->GT1                                                                           <------MYB83 <---------TGA1a                                                                         <---------WOX13(1)                                                                       --------->ATHB12 <---------O2                                                              --------->AHL20(1)        --------->O2                                                              --------->ARR11(3)        --------->TGA1a                                                            <---------ARR11(3)         <------NtERF2                                          <---------AHL20(2)--------->ARR11(3)        ------>NtERF2                                         --------->AHL20(2) --------->AHL20(1)       <---------DEAR3(1)                                     <---------YAB1      --------->AHL20(2)<------MYB46(1)                                  <---------DAG2     =============================================bZIP_DOF -------->DOF5.7(2)          <-----------GT1    ------->TEIL<---------AHL20(1)       <----------ID1 -------->At5g28300         <-----------GT1 <---------TOE2(3) <---------AHL20(1)   --------->ANAC46 --------->GT1  <----------DOF2   <----------DOF2    ---------->DOF2  <---------YAB1 ----------->HVH21   acggtaacaatatacaaactttctctattttttccacttttgatttaatgaatctaaaagaaaatattttggatgattggtatataggcgacgagtggta  16653900                                                             --------->ANAC55(2)                  --------->ANAC58                          <-------TEIL                  --------->ANAC58                         --------->CCA1(2)             <---------WOX13(1)                           <---------ARR14(2)           --------->ATHB12                               --------->ARR14(2)                        -          <---------YAB1                            <-------TEIL                              -------      <---------ANAC46                              --------->ZAT18                           -------    --------->MYB52(1)                         ---------->DOF2  <---------ANAC46            ---------   ----------->TGA1               --------->At4g35610     --------->ARR11(1)            <---------LBD16   ----------->HVH21              <---------At4g35610   ----------->ARR10       <------ZmHOX2a(1) <--   tgtggatgacggatgattgcaagaaatcgttcatggagatgaaatggaagaaagtgcatagatacgtcgtttacaaactcgaggagaagtctcggaaagt  16654000                       <------NtERF2                      ------>NtERF2                      <---------ATERF1(1)                     --------->ATERF1(2)                     --------->RAP2.3(2)                     <---------ATERF1(2)                     <---------DEAR3(1)                    <---------LBD16                    --------->ORA47(2)                    --------->RAP2.3(1)                    --------->RAP2.6(1)                    <------NtERF2                    --------->ATERF1(1)                    --------->DEAR4(2)                    --------->ERF1                   ------>NtERF2                  --------->RAP2.3(3)                  --------->RAP2.3(2)                  --------->DEAR3(1)                  --------->ATERF1(2)                 --------->DEAR4(2)                 --------->RAP2.6(1)                 --------->ATERF1(1)                 --------->ERF1                 --------->ORA47(2)                 --------->RAP2.3(1)                 <---------RAP2.6(2)                 --------->DEAR3(2)                <---------ATERF1(1)                ------>NtERF2             <------MYB46(1)             <---------MYB46(3)                                                                   ---             <------MYB83                                                                         ---             <---------DEAR3(2)                                                                  <---            --------->MYB46(2)                                                                   <---            --------->MYB111(2)                                                                 -----            <---------AtMYB61<---------At4g35610       <---------LBD16                          <----            --------->ALFIN1 --------->At4g35610   <----------DOF2                              -----            <---------DEAR3(1)                  <----------DOF2                                 <----            --------->MYB55(2)                <---------At4g35610                               -----     <---------REM1(2)--------->LBD16   ------>ZmHOX2a(2)                                       <----   --------->ETT(2)<---------RAP2.3(1)  ============================HOX2a_HOX2a                 -----   <---------ETT(2)<---------ATERF1(1) =============================HOX2a_HOX2a                 ----- -------->DEAR3(1)<---------ATERF1(2) <---------ARR14(2)                   --------->ANAC58     <---- -->ANAC58  --------->MYB111(1)       --------->ARR14(2)              <---------MYB46(3)        <---- -->ANAC58  <---------MYB46(3)        <---------ARR11(3)     <------ZmHOX2a(1)<---------ANAC46  ----- ->DOF2    <--------P--------->DEAR3(1)<------ZmHOX2a(2)  <------NtERF2    --------->ANAC58    <----- -------At5g28300<------NtERF2        --------->ARR11(3) --------->LBD16<---------MYB52(1)<---------YAB1   caccgtcgacaaggttggtgccgccggcgagagctacgacgatctcgctgcttctttgccggaggatgactgtcgttacgccgtgtttgatttcgattac  16654100     <---------ETT(2)  --------->DEAR3(1)         ------>ZmHOX2a(2) ------>TGA2(2)             <------ZmHOX2a(2) -------->HVH21            <---------ARR14(3) --------TGA1              <---------ARR11(3) --------HVH21             --------->ARR11(3) ---->TGA2(1)              --------->AGP1 -----ANAC58               --------->ARR14(2) ---->ANAC46               --------->ARR14(3) -----ANAC55(2)            <-----------ARR10 ---->ANAC55(2)            <---------ARR14(2) -----TGA2(1)   <---------SPL7 ---->ANAC58   <---------ANAC58                                              <---------HSFB2a(2) ---->ANAC58 <-----------HVH21                                               --------->HSFC1(1)  <--- -----bZIP60(1)<---------ANAC46                     <-----------GT1          --------->HSFB2a(2) <--- -----ANAC58------->GAMYB----------->ARR10     --------->MYB52(2)        <---------GLK1(1)      <---- ---->bZIP60(1)<---------ANAC58              <--------P           <----------DOF2            <------- ------STF1<------------AtMYB77    --------->YAB1<---------ZAT6 ---------->ID1              <--------   gtcaccgtcgataactgtcgtatgagcaagatcttcttcataacttggttagtgtcactatctcttgtcttttcgatttctcgaattgtcgattttaccc  16654200  Previous    Next  AGI:  At4g34970.1    Description:  actin binding. Identical to Actin-depolymerizing factor 9 (ADF9) [Arabidopsis Thaliana] (GB:O49606); similar to ADF5 (ACTIN DEPOLYMERIZING FACTOR 5), actin binding [Arabidopsis thaliana] (TAIR:AT2G16700.1); similar to unknown [Populus trichocarpa] (GB:ABK95505.1); similar to unknown [Populus trichocarpa] (GB:ABK94297.1); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) Range:  from: 16653709    to: 16654876    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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