Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->bZIP60(1)                                           <---------bZIP60(1)             --------->AHL20(2)         ----------->HVH21    ----------->GT1                   --------->ANAC55(2)                                 -----------   ----------->GT1            --------->YAB1                                    --------->ANAC58 >AHL20(2)   <---------AHL20(2)       <---------ANAC55(2)      <---------ICU4   --------->ANAC58   aacataagttaaaatttaaatgtccgaaggaatcatagttaagtgacagcatttaagttgtctaaaaattgccatttgccactcgcatcaatttgtaatt  16648200                                                                                          -----------                                                                                          <---------ALFIN1                                                                                        ------>MYB83                                                                                        ------>MYB46(1)                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                                      --------->MYB46(3)                                                                                    --------->MYB52(1)                                                                                    -------->P=======                                                                                    =================                                                                                    ------>MYB83  <--                                                                                    ------>MYB46(1)                                                                                   --------->MYB55(1)                                                                                  <---------MYB111(2)                                                                                  <---------MYB46(2)                                       --------->ANAC55(2)                        --------->MYB46(3)                                       <---------ANAC55(2)                        <---------MYB111(1)                                       --------->ANAC58                           <---------MYB55(2)            <---------AHL20(2)         --------->ANAC58                    <-----------ARR10  -------           --------->AHL20(2)       --------->At5g28300  <---------YAB1    --------->ARR11(3) <------      <---------ZAT18   <---------ARR11(3)          --------->YAB1         <---------ARR11(3) <------ ---------->DOF2        --------->ARR14(2)   --------->AHL20(2)           --------->RVE1(1)   ------- >GT1 --------->ZAT18   <---------ARR14(2)  ----------->GT1               --------->CCA1(1) <--------   ttgcaaagtgcaattttatgtctcaagatttgtttcgcagtaagtaatgaaataacataatcaatgttctaacaaaatatctcacctaccagccacacga  16648300                                                        --------->ARR11(3)                                                       <---------ICU4 >RAV1(1)                                              --------->ATHB12 ==========================================bZIP_DOF   --------->ICU4 ===MYC_MYB                                         --------->YAB1 -------ZAT6                                        <---------ICU4 -->O2                                             --------->ICU4                                ---- ---TGA1a                                 --------->MYB46(3)    ------>NtERF2                 <------ ---O2                          ---------->DOF2  --------->YAB1 <---------RAP2.6(3)           ------- -->TGA1a                    <---------MYB59-------->P<---------YAB1      <------ZmHOX2a(1)--------->ICU4 -ALFIN1                   <-----------------------TaNAC69(2)  <---------ETT(1)     ---------->DOF2   gtgtcaatttagtttacatttgaaccagagacctaaaagtttgaactaccaaaataatgattttgccgacaaaataggaaaactaagaaagtagtaatga  16648400                     ======================HOX2a_HOX2a      --------->ARR11(3)      <---------ARR11(3)     <---------RVE1(1)                          --------->AHL20(1)     --------->RVE1(1)                          <---------AHL20(1)     <---------GLK1(1)                         --------->AHL20(2)     --------->GLK1(1)              <------ZmHOX2a(1)              <---------ANAC46    --------->ARR11(3)            <---------TOE2(3) <-----------GT1----------->GT1----------->GT1    <---------ARR11(3) ---------->DOF2       --------->AHL20(2)    <---------ANAC58 --->TEIL            <------ZmHOX2a(2) --------->ANAC58            <---------ANAC58 ---YAB1           <---------At4g35610 --------->ANAC58            <---------ANAC55(2) -->ICU4           --------->At4g35610 ----------->GT1             --------->ANAC55(2)    ---------->DOF2   atatcagatatctgtttcttcagatcaaagcctactaaggaacgcaaaaatatataactaaacaaaattgcgtaaatttagaaacagtgattaaaagccc  16648500                                                                   --------->YAB1                                                                  <---------YAB1                                                               <---------MYB52(1)                ----                                                              <-------GAMYB               <---------ATHB12               <------------CBF   <---------ICU4 <---------RAP2.6(3)                  --------->ANAC58           --------->YAB1       --------->ARR11(3)      --------->MYB59               --------->ANAC58  <---------AHL20(2)            <---------ARR11(3)<---------MYB52(1) <---------CCA1(2)--------->ANAC46   atatttgattcaatagtaattgaaaacagcataagataatggcccattagccgttatttaggcccgttatcatatcacaaaacaaaacacgaatcatcta  16648600                                                                ------>NtERF2                                                                --------->LBD16                                                               <---------ANAC46                                                              <---------LBD16                                                           <---------WOX13(1)                                                          <---------ANAC58                                                          <---------ANAC58                                                         --------->ATHB12                                                        <---------YAB1          *TSS        <---------ZAT14                 <----------DOF2                ----------->HVH21        ----------->GT1                           --------->ZAT14                    --------->LBD16     <---------ARR11(3)                           <---------ZAT14                    <---------SPL7     --------->ARR11(3)         <------ZmHOX2a(2) --------->ZAT18                   --------->DEAR3(1) ----->ANAC46         --------->ZAT14             <---------ZAT18   --------->ICU4 <---------LBD16   cgacgaagacctgaaaaaacacactgcaattgagatcgatttcgactgtaagtgaactttgattgccgcgaagattactcaaatcgccggacacaagttt  16648700                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                       --------->CCA1(2)                                                      <---------ARR11(3)                                                      >>>>>>>>>GATA-1                                                      --------->AGP1---------->DOF2                                                      >>>>>>>>>GATA-2                                                      >>>>>>>>>GATA-4               ---------->ID1                                                      >>>>>>>>>GATA-3           <----------DOF2                              ---------->DOF2        --------->GLK1(1)          <---------DAG2     --------->GLK1(1)   XXXXXXXXXXXXXXXXXXXXX>MIR2936--------->ARR11(3) --------->GLK1(2)  <--------   ttcagtgaattccattggcatagaactcgagagaaagagacacagagagagagagagatctaacaagagtcaaagtttctgactttttcgcattcttttt  16648800                                                                               <------ZmHOX2a(2)                            <---------At4g35610                               --------->ARR14(3)                            --------->At4g35610                               <---------ARR11(3)                        <-----------HVH21                                     --------->ARR11(3)    -                       --------->ALFIN1                                      <---------GLK1(1)      <                     <---------ANAC58                                <---------ANAC58               <                     <---------ANAC46                                <---------ANAC46               -                     <---------ANAC58                         =======================================                     <---------ANAC55(1)               >>>>>>>>>TBF1 <---------ANAC58               - <------ZmHOX2a(2)  <------NtERF2                   >>>>>>>>>TBF1   <-------TEIL------>ZmHOX2a(2)   < --DOF2        <-----------RAV1(1)               >>>>>>>>>TBF1---------->DOF2--------->GLK1(1)    <--   gagatcgagttctgtttttgttggcgtgtgagatgaattcttaagaaggaagaagaagaagaaggaaagatgcgtagagagatctcgtttttgctacagc  16648900          <<<<<<<<<TBF1 -------->TGA1a ---------ZAT2 ---------O2                                                   --------->DAG2    ------>NtERF2 -------->ZAT2                                                ---------->DOF2   --------->DEAR3(1) =========bZIP_DOF                                         --------->LBD16      <---------ETT(1) -------->O2                        ------>ZmHOX2a(1)    <---------LBD16        ----------->HVH21 ---------TGA1a                 <-----------GT1         --------->MYB52(1)   <-----------GT1 ---------RAV1(2)        --------->MYB52(1)            <---------ALFIN1<----------DOF2     <---------   ccaggtgtcttcttcttctcgttgccctaacgattttcctcgtcttcgcgctcttcaacaccggaaaagtaagcttttttctccgacccgttttcatctt  16649000                                                   <---------GLK1(2)                                                ------>ZmHOX2a(2)                                               --------->CCA1(2)                                               <------ZmHOX2a(2)                                              <---------ARR14(2)                            <---------ANAC58  <---------ARR11(3)                            <---------ANAC58  --------->ARR14(2)                    ------>ZmHOX2a(2)         --------->GLK1(2)                  <---------AGP1              <---------AGP1                  --------->ARR11(3)          --------->ARR11(3)                  <---------ARR11(3)          <-----------ARR10                <----------DOF2   <-----------GT1--------->ARR14(2)          --------->ARR14(3)            <-----------GT1  ---------->ID1 <---------CCA1(2)            <---------ARR14(3)    <---------ANAC46  --------->ZAT14 <-----------HVH21<---------ARR14(2)        ----------->ARR10    <----------DOF2      <---------ZAT14 ---------------ANAC81   <---------GLK1(2)<---------At4g35610------->TEIL----------->GT1  <---------ZAT6   atttgtcacattttcatgtggatctcaaattcttgtgtttcttcagaagatctgattctcttgaacccttttgtggagttactttctgagtagtgttttt  16649100  Previous    Next  AGI:  At4g34960.1    Description:  peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative. similar to CYP5 (cyclophilin 5), peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT2G29960.1); similar to putative peptidyl-prolyl cis-trans isomerase [Brassica rapa] (GB:BAF81521.1); contains InterPro domain Cyclophilin-like (InterPro:IPR015891); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; (InterPro:IPR002130) Range:  from: 16648610    to: 16650902    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version