Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------AHL20(2)                                                                      <---------ICU4                                                    --------->At4g35610       <----------DOF2                                        ----------->GT1              --------->ICU4 ----------->GT1            --------->ANAC58        <---------At4g35610 <---------YAB1 ------>DOF2         ----------->GT1   --------->DAG2                <---------YAB1              ---- >DOF2  ----------->GT1     --------->ANAC58 <---------KAN4(2) ------>MYB83<-----------GT1     ------ --->ANAC81   ---------->DOF2         ---------->DOF2          ------>MYB46(1)<---------DAG2   ------   aaagagtgaattgtataaaagaagcgaaataagcaaaaacaaaagtgaatattcagctcaaaacctccctcattattctactttttatttgtttttcaag  16613900                                                                                                    <                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  XXX                                                                                                  ---                                                                                                  <--                                                                                                 <---                                      --------->ATHB12                                           ----                                     <------ZmHOX2a(2)                     --------->RVE1(1)     <---                       --------->ANAC46                              ----------->GT1             <---          <---------TOE2(3)          <---------YAB1              <---------ARR14(2)              ====         <---------DOF5.7(2)        --------->ARR11(3)           --------->ARR14(2)          --------       --------->DOF5.7(2)  --------->ICU4                  ----------->GT1--------->CCA1(1) <-------      --------->TOE2(3)--------->ANAC58                     ------>ZmHOX2a(2)      --------->YAB1<--- ----->AHL20(2)        --------->ANAC58                    <------ZmHOX2a(2)      <---------ATHB12<-- --->ANAC58   <-----------GT1       <---------ARR11(3)    <---------ARR11(3)--------->ARR11(3)  ----- --->ANAC58   ------->TEIL--------->YAB1                  --------->ARR11(3)<---------ARR11(3) <-----   taaatcgacgttaatgtaactatgcaagtcataagtaagatcattgttcgaagaaaataagatcgtgaatccagtaaatatcccatcatacaagcgttca  16614000        --------->ARR11(3)        <---------ARR11(3)       --------->YAB1    ---------->DOF2 -------TEIL ---->PIF5 -----PIF5 ---->MYC4 ---->MYC3 -----MYC4 ---->MYC2 -----MYC3 XXXXXXXXXXXXXXXXXX>MIR173 ---->PIF4 -----MYC2 ------TGA1a ----->TGA1a ------ANAC58 ------ANAC46                                                    <---------ANAC46 ==============bZIP_DOF                                        --------->ZAT14                   <--- ->DOF5.7(2)             --------->ATHB12                      <---------ZAT14                   ---- ----HVH21   <-----------GT1                                  --------->ALFIN1            --------->ANAC46 ------ANAC58--------->ZAT6  <---------AHL20(2)  --------->GLK1(2)                    --------->YAB1 -----PIF4   <---------ICU4  --------->AHL20(2) <---------GLK1(2)<---------bZIP60(2) <---------ATHB12 ------->OsbHLH66  --------->TOE2(3)   <---------ZAT6         <-----------RAV1(1)  --------->WOX13(1) ----DOF5.7(2)     <---------MYB59     ----------->GT1  --------->MYB52(1)--------->AHL20(2)---------   cgtgcagaaagataatcactacctaaatgatttaaatgggagtgtcaatagaatcggataacgagtgttgtggcaaaaaaatgctcaatcatacaccaaa  16614100                   --------->CCA1(2)               --------->TOE2(3)         <---------DEAR3(2)                  <---------AHL20(1)            <---------ALFIN1          <-----------HVH21                  <---------ARR11(3)         <---------PCF5        <---------MYB52(1)       --------->TOE2(3)                     <------NtERF2        --------->At5g28300      <---------ZAT6                         --------->PCF2       --------->LBD16      ----------->GT1      <----------DOF2  <---------DEAR3(2) ------->GAMYB<---------DREB2C(2) --------->YAB1   --------->ARR11(3)        <-----------TCP11(1) --------->RAP2.6(2) ------AHL20(2)   --------->AHL20(1)       <---------DEAR3(1) --------->ANAC46          ---------->DOF2 ----->AHL20(2) ----------->ARR10         --------->ATERF1(1) --------->DEAR3(1)<-------TEIL       <- >ANAC46  --------->AHL20(2)      <----------DOF2  --------->AtMYB61     <-----------RAV1(1)       --   aaattgtaatgttaaaataagatattgggctttaggcttttggagtcggcccacctaaactccaacgccgtaattctgtcggtccatctaaaaagaatca  16614200                                                                                                <----                                                                                              -------                                                                                              <------                                                                                              <------                                                                 <---------MYB52(1)           <------                                                                <-------GAMYB                 -------                           <---------O2                         =====================================                           --------->O2                     <---------ALFIN1                 --------                           --------->ANAC58       ------>ZmHOX2a(2)                          ========                           --------->ANAC58      <------ZmHOX2a(2)                           --------                           --------->ANAC46      --------->ARR14(1)                          <-------                          <---------LBD16        --------->CCA1(2)                           --------         ---------->DOF2 <---------ALFIN1       <---------ARR14(2)                           <-------      <---------TOE2(3) ------>ZmHOX2a(2)       --------->ARR14(2)                         <---------ALFIN1    --------->ATHB51   <------ZmHOX2a(2)        --------->AGP1  --------->At5g28300       <---------REM1(2)    --------->YAB1    <---------ARR14(2)       --------->At4g35610                    --------->AGP1    <---------ICU4    <-----------ARR10        <---------At4g35610                   --------->At4g35610   <---------ATHB51   --------->ARR14(2)      ----------->ARR10----------->GT1  <---------YAB1-------   <---------ATHB12  <------ZmHOX2a(1)     <-----------HVH21------->GAMYB   <---------ARR11(3)-------   --------->ICU4    ===================================HOX2a_HOX2a        <---------CCA1(2) <------- --------->WOX13(1)<---------TOE1(2)   --------->TOE2(3)    ========================================= --------ATHB12  --------->TOE1(2)     ------->GAMYB       --------->MYB46(3) --------->YAB1 -------- --------------->AGL3====================================HOX2a_HOX2a  <-----------GT1<---------At4g35610   aatcaattatggaaaggagcctaggatccacgcgacttcaaccctagtcagatccgattcaaccacggttaatttccatatcatcacagctctacacgtg  16614300  --------->WOX13(1) -------HVH21 ->ABF1 -MYC4 -MYC2 -MYC3 >MYC3 ==MYC_MYB ->ANAC55(2)                                   <---------HSFB2a(2) ================MYC_MYB   <---------------AGL15 ->ANAC46            <---------ICU4            --------->HSFB2a(2) --O2             --------->YAB1        <---------At5g28300 ->O2            ------>MYB46(1)      <-------TEIL                                                 -- --TGA1a         ------>MYB83       --------->ARR14(2)                                             <- >MYC4          ----------->RAV1(1) <---------GLK1(2)               --------->YAB1                --- >MYC2--------->MYB52(1)  ----------------->AGL3             ------>ZmHOX2a(1)                    <-- --ANAC55(2)  --------->MYB46(3)*TSS<---------ARR14(2) <---------AHL20(2)                       ----- ==MYC_MYB<-----------HVH21--------------->AGL15      <---------AHL20(2)              --------->TOE1(3) ->TGA1a ------->GAMYB  <-----------GT1<-----------GT1--------->AHL20(2)------->TEIL  --------->TOE2(3)   tcataaatcaacggtcaccaacataatttccattttcagattcaccgttttagaaattaaatcctctctataagaacctctccaaaaaccctaatttgtc  16614400        --------->YAB1     <----------DOF2 ------->YAB1                           --------->ARR14(2)                                    ------- --------ICU4                           <---------ARR14(2)                                ----------- ------>ICU4                           <---------CCA1(2)                                 <---------At4g35610 -------YAB1                 <-----------GT1        --------->ARR11(3)                   --------->At4g35610 ---->YAB1                <---------GLK1(1)     ---------->DOF2                        ---------->CDC5   atcatcactttcacaatcttcttcatcgatttctctcttccaaatctcccaaaagatgtcgaaccctagagttttcttcgacatgagtctcagcggtact  16614500                                                                           --------->LBD16                                                                          <---------ATERF1(2)                                                                          --------->TOE1(2)                                                                          --------->ATERF1(2)                                                               <---------ZAT18                                                             --------->LBD16                                                            <---------ANAC58                                                            <---------ANAC58                                                            <---------ANAC46                       <-           ------>ZmHOX2a(2)                                --------->ANAC55(2)                    <-          <------ZmHOX2a(2)                             <---------GLK1(1)--------->DEAR3(2)   -------         <---------ARR14(2)                       --------->LBD16        <---------LBD16      -------     --------->SPL7                              <---------DEAR3(1)     ------->TEIL        ---------   ----------->HVH21  <----------DOF2            <---------ANAC46     --------->ZAT14       =========   <---------SPL7     <---------DAG2            <---------LBD16--------->ZAT14   ==================== -->SPL7 --------->ARR14(2)<---------At4g35610--------->ANAC46 <---------ZAT14   ---------->DOF2  --- ---->AtSPL3    --------->ALFIN1      ------->GAMYB<------NtERF2      <---------ZAT14     -----------   cccatcggacggatcgagatggagcttttcgctgatacaaccccaaacacggcggagaatttccgtgctctctgtaccggcgagaaaggaatgggaaagc  16614600        ====================bZIP_DOF        --------->TGA1a        --------->bZIP60(2)                                                                     -----   --------->ANAC58                                                                     <---------ARR14(2)   --------->ANAC58                                                                  --------->ANAC58 -----MYB46(1)                                                                       --------->ANAC58 -----MYB83          <------ZmHOX2a(1)                                       ------>NtERF2     <----- -->ANAC58<---------ZAT14                                <-----------HVH21  --------->DREB2C(2)------ -->ANAC58--------->ZAT14   ------>ZmHOX2a(2)      <-------TEIL             --------->ANAC46  <------ ->DOF2 --------->O2 ==============HOX2a_HOX2a   --------->ARR14(2)         --------->DEAR3(1)------- =================bZIP_DOF<---------ARR11(3)   --------->LBD16             --------->MYB46(3) <------ =================bZIP_DOF--------->ARR11(3)  --------->LBD16             <---------At5g28300<------- ------>MYB59    ---------->DOF2<---------ALFIN1 <---------ARR14(2)      <-----------GT1--------->ARR14(2) ------------>TaNAC69(2)------>ZmHOX2a(2)    <---------LBD16     ----------->GT1   --------->MYB52(1)   taggtaagccacttcacttcaaaggatcgatcttccaccgtgtgattcccggattcatgtgtcaaggaggtgatttcaccgccaagaacggaaccggtgg  16614700                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                              --------->GLK1(2)                    --                                                             <---------ARR14(2)                    <-         --------->ANAC46                                    <---------GLK1(2)                ------- ------------------>TaNAC69(2)                               --------->ARR14(2)           --------->ZAT6 ----MYB46(3)                                              ----------->ARR10           ------>ZmHOX2a(1) ----->GT1                        <----------DOF2      --------->At4g35610             ============== ---AtMYB61                       <---------DAG2       --------->ZAT2                  ============== -->ALFIN1                     <---------ARR11(3)      <---------At4g35610            <---------MYB59 ---DEAR3(1)             <------ZmHOX2a(1)             <---------ZAT2         --------->ZAT6<-------- --MYB52(1)<---------------------WRI1                <------ZmHOX2a(1)     xxxxxxxxxxxxxxxxxx>smallRNA(fl3)   tgaatcgatctacggtgctaagttcaaggacgagaactttatcaagaagcatacaggagctgggattctctcaatggctaactctggtcctaacactaac  16614800  Previous    Next  AGI:  At4g34870.1    Description:  ROC5 (ROTAMASE CYP 5); peptidyl-prolyl cis-trans isomerase. Identical to Peptidyl-prolyl cis-trans isomerase CYP18-4 (CYP18-4) [Arabidopsis Thaliana] (GB:Q42406); similar to ROC3 (rotamase CyP 3), peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT2G16600.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77164.1); contains InterPro domain Cyclophilin-like (InterPro:IPR015891); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; (InterPro:IPR002130) Range:  from: 16614332    to: 16615318    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version