Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <--------P                               <------MYB83                              <---------TOE2(2)                              <---------AtMYB61                             <------NtERF2                            <---------SPL7                           <---------ANAC46                      --------->MYB52(1)                     ---------->DOF2                  --------->ANAC58                  --------->ANAC58                  --------->ANAC46 <------MYB83                  --------->AtLEC2 <------MYB46(1)                 <-----------GT1 ---------->ID1   <              --------->CCA1(2)<------MYB46(1)              <-----------GT1      <---------MYB46(3)<-           <---------YAB1  <---------ANAC58      --------->At4g35610   <----------DOF2         <----- --------->DOF2<-------TEIL<---------ANAC58      <---------At4g35610  <---------DAG2   ------>ZmHOX2a(1)   aagaaagcatatgaagattcaagcaaagggcgtaggtagggaataggtttgagcagaaatttcaactcttcaccttttctcatttgttcctctatttctt  16607900                                                            ----------->RAV1(1)                                                           --------->MYB46(3)                                                         ----------->RAV1(1)                                                         ------>MYB46(1)                                                         ------>MYB83                                                       --------->MYB46(3)                           <                                                       <---------MYB59                           <---                                                      --------->ANAC58 <---------ICU4          ------      <----------DOF2   --------->YAB1                --------->ANAC46--------->ICU4           <----- ---------At4g35610  --------->WOX13(1)               --------->ANAC58<---------YAB1          <------ ----------GT1      ------>ZmHOX2a(2)         <---------ARR14(2)    --------->YAB1            ------- -----DOF2    --------->YAB1              <---------At4g35610  ------->GAMYB<----------DOF2   <------   tttgctgtctttctattgatgatccatcatacatgtagaaactcagcaaatttgatacccaacaacagagtcataattctttaatatcaatttcgaatga  16608000 ---------TOE2(3) ------WOX13(1)                                                                                    <- --->ATHB12                                                                                       <-- ---ATHB1                                                              --------->YAB1             <-- ---ATHB12                        <----------DOF2        <---------ARR11(3)             <----------DOF2 -->ICU4                  --------->MYB52(2)             --------->ARR11(3)  --------->YAB1 <-------- ---YAB1                <---------MYB52(1)<----------DOF2<---------------AtSPL8     <---------ALFIN1   ttgatgttaacagaagaaaaaatttagttagtttctctttcattctttttaagtgtgaagatgtacaaaacaactataactataacacacctttgtgttg  16608100                                         ---------->DOF2                                      --------->TOE2(3)                                    --------->ARR11(3)                                   --------->RVE1(1)   <-----------GT1                 --------->CCA1(1) ---------DOF2              --------->ANAC58                                             --------->HSFC1(2) -------ANAC58              ----------->GT1                                              <---------HSFC1(2) -------ANAC58          ------->TEIL<---------ARR11(3)                                  ------->TEIL ---RAV1(1)  ---------->DOF2--------->ANAC58 --------->ARR11(3) ---------->DOF2 --------->YAB1   gcttttaactaagcctaaagactatgtatcaagaaaaaaatctcaaagaactggagttggattttagaaagagccaatgcaataaacatgaagcttctaa  16608200                                                       <-----------HVH21                                                      --------->ANAC58                                                      --------->ANAC46                                                      --------->At4g35610            <---------AHL20(2)                                                      <---------At4g35610          <-----------TBP                                            ------------>CBF                   ----------->GT1        ------>MYB83                      --------->LBD16                    <---------ANAC46        ------>MYB46(1)                   --------->ZAT18                  <---------ZAT14        -------->P ------>MYB83           <---------ZAT18                  --------->ZAT14      <---------MYB111(1)               --------->ANAC46             ---------->DOF2 ----------->TBP   <---------ALFIN1------>MYB46(1)    <-----------GT1 --------->ANAC58  --------->At4g35610       <--   atctcacacctactcttcaccaaatatcaactagacagaaataccgcacaatatgcaggtcacaaaactgcaaaagctgcagtgtatatatatgccttca  16608300                                                                                <-------TEIL                                                                             <------MYB46(1)                                                                             <---------ANAC58                                                         --------->HSFB2a(1) <------MYB83                                                         --------->HSFC1(2)  <---------ANAC58                                              <-------TEIL              <-----------RAV1(1)           <-----------GT1             --------->MYB52(1)<---------HSFB2a(1)<---------MYB46(3)     --------->TOE1(3)                ------->GAMYB      <---------HSFC1(2)<---------ANAC46     --------->TOE2(3)               <---------MYB52(2) --------->ANAC58<---------ZAT6              -     <---------DAG2                  --------->MYB46(3) --------->ANAC58--------->ALFIN1           --   ------->TEIL         --------->CCA1(2)    --------->CCA1(2)      --------->ZAT14                <-  <-----------GT1      --------->ARR14(2)   <---------ARR14(2)      <---------ZAT14               <-- --------DOF2     *TSS <---------ARR11(3)   --------->ARR14(2)   --------->At4g35610              ---   ctttgaaccttatttacagacccaagatttgagtcttcaacaaacagatacaaatgggaagcatcgatgctgcagtgttgggttcagagaagaaatcaaa  16608400         ----------->RAV1(1)         --------->RAP2.6(2)      --------->ANAC58      --------->ANAC58     --------->DAG2    ---------->DOF2         ---------->DOF2 --------->LBD16        --------->LBD16 -------->LBD16        <---------HSFB2a(2)   <---------ZAT2 ------->LBD16        <---------LBD16        <---------STY1(2)                                     -- --------LBD16  <---------ANAC58             --------->ZAT2                                      ---- -------LBD16   <---------ANAC58             --------->STY1(2)                                   <--- ------>TOE1(2)<---------ICU4          ------>ZmHOX2a(1)                              --------->MYB46(3)   cccgggaaaagccacaattcttgctctgggaaaagcctttcctcaccagctagtaatgcaagagtacttagtcgatggctacttcaaaaccaccaagtgt  16608500                                                                                                -----                                                                                             --------                                                                                          ------>ZmHOX2a(1)                                                                                        =============      --------->ZAT14                                                                   ----------->RAV1(2) --------->HVH21                                                      <-----------GT1--------->At4g35610 ----->At4g35610             <---------CCA1(2)    <-----------GT1 <----------DOF2    <---------At4g35610 ------At4g35610  <---------GLK1(2)              <-----------GT1  <---------DAG2<---------HSFB2a(2) -   gatgaccctgaactcaaacagaaacttactcgtctctgtaatctcttcattttaacctctgttttcaactttttatctcattctgtaagctcctgcaaca  16608600                                                                                      --------->GLK1(2)                                                                                     <---------ARR14(2)                                                                                     <---------GLK1(2)                                                                                     --------->ARR14(2)                                                --------->MYB52(1)                 ----------->ARR10                                         --------->ANAC58                         <------ZmHOX2a(1)                                     --------->ANAC46                      <-----------HVH21                                     --------->ANAC58                     --------->TGA2(1)    <---------TOE2(3)        <---------------AGL15  --------->At5g28300   <---------TGA2(1) -->GAMYB               --------->DOF5.7(2)    --------->MYB46(3)         --------->bZIP60(1) --->RAV1(1)   <-----------GT1       --------->ANAC58        --------->ANAC58  <---------At4g35610 ====RAV --------->MYB52(2)  --------------->AGL15 ------->GAMYB          <---------bZIP60(1) -------->At4g35610 <---------MYB52(1)   --------->ANAC58    --------->ANAC58  --------->At4g35610   gcaactgaggtttgtttgaactgttcgtttactatatacaggcaagacaacaacggtgaagacaaggtatgttgtgatgtcagaggagattctcaagaag  16608700                                      <---------At4g35610                                  <---------bZIP60(2)                                  --------->ANAC58                                  --------->ANAC58                               ----------->TGA1                               ----------->HVH21                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                                                 --------->LBD16                       <---------ARR11(3)        <---------At4g35610                     --------->HSFB2a(2)                       --------->ARR11(3)        --------->At4g35610                     <---------HSFB2a(2)                       --------->ARR14(2)  <---------HSFB2a(2)                      --------->HSFB2a(1)    --------->ARR14(2) <---------ARR14(2) --------->REM1(2)                         <---------HSFC1(2)    <---------ARR14(2)<------ZmHOX2a(1)<---------ANAC46                             <---------HSFB2a(1)  --------->LBD16  =============HOX2a_HOX2a--------->HSFB2a(2)                --------->At4g35610 --------->ANAC46  <------ZmHOX2a(1)  <------NtERF2             ----------->HVH21   --------->HSFC1(2)   tacccagaacttgccattgaaggaggatccacagtgacgcagcgtctagacatctgcaacgatgcagtgaccgagatggcagtagaagcctccagagcct  16608800  Previous    Next  AGI:  At4g34840.1    Description:  ATMTN2; methylthioadenosine nucleosidase. similar to ATMTN1, catalytic/ methylthioadenosine nucleosidase [Arabidopsis thaliana] (TAIR:AT4G38800.1); similar to unknown [Populus trichocarpa] (GB:ABK92454.1); contains InterPro domain Nucleoside phosphorylase; (InterPro:IPR000845) Range:  from: 16606279    to: 16608029    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g34850.1    Description:  chalcone and stilbene synthase family protein. similar to chalcone and stilbene synthase family protein [Arabidopsis thaliana] (TAIR:AT1G02050.1); similar to chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] (GB:AAZ23684.1); similar to chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] (GB:AAZ23683.1); similar to chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] (GB:AAZ23686.1); contains InterPro domain Thiolase-like; (InterPro:IPR016039); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328); contains InterPro domain Chalcone and stilbene sy Range:  from: 16608318    to: 16609834    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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