Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------YAB1                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                     ------->GAMYB                --------->AHL20(2)                                    --------->MYB46(3)         ----------->GT1                         <----------DOF2                       --------->YAB1         ------->TEIL ---------DOF2         <---------At4g35610  ------>ZmHOX2a(1) <---------ATHB12  <------ZmHOX2a(2) -->CCA1(2)      <----------DOF2  <-----------GT1     <<<<<<<<<TBF1   --------->CCA1(1)     <-------- ->ARR10      --------->GLK1(2)<----------DOF2  <---------At4g35610   --------->RVE1(1)     <--------   gctttttttgtatgagaagcttttccgcttcttctttaaccatctccttctgcttcttcttcaaatgataaaatatcatcggatcatggatgttagggtt  16582500                                                    <---------GLK1(2)                                              <---------ARR14(2)                                              --------->ARR14(2)                                           ========================HOX2a_HOX2a                 --------->ANAC46          ------>ZmHOX2a(2)       <-------GAMYB           <------ZmHOX2a(1)                 --------->ANAC58    <---------ANAC58        <---------DEAR3(1)         <-----------RAV1(2) -TOE2(3)        --------->ANAC58    <---------ANAC58       <---------LBD16             <---------LBD16 -TOE1(3)<-------TEIL                <---------ANAC46       ------>ZmHOX2a(1)        <---------GLK1(1)   tgaaaaacgagttcatcacaaggaatggtgagacccatgtcgtgatcgaatccaaattcttcctcggctcgttgtaagagagattggaactcaggatgtg  16582600                                                                      <-----------HVH21                                                                     --------->ANAC58                                                                     <---------ANAC55(2)                                                                     --------->ANAC58           -----                                                  --------->ANAC58  --------->SPL7            <------                     ------->TEIL                 --------->ANAC58  <-------TEIL             --------                     <---------ARR14(2) ------>NtERF2         <---------MYB52(1)            ---------                     --------->ARR14(2) ----------->RAV1(1)   <----------DOF2    --------->ANAC58                    <---------CCA1(2)  ----------->HVH21--------->ALFIN1---------->DOF2--------->YAB1        <---------ARR14(2)             <---------ETT(1)--------->HSFC1(2)        --------->ANAC58     <------ZmHOX2a(1)                 --------->ANAC46<---------HSFC1(2)      --------->SPL7--------   tcaagaaggagattgggacaatgtatctgcttctgttctctccgacatagacagggaagtgtccctttggtacgtcaagcggaaggcaatcttcatcgta  16582700                                            --------->At4g35610   ------>ZmHOX2a(1)                    <---------ARR14(2) ---->SPL7                              --------->ARR14(2) ---SPL7                                --------->GLK1(2) ->TOE2(1)      --------->HSFB2a(2)     <-----------ARR10      <---------ANAC58         ---------->DOF2 ------>AtSPL8  <---------HSFB2a(2)    <---------GLK1(2)       <---------ANAC58        <---------ICU4 ->TOE1(1) <<<<<<<<<TBF1      <---------CCA1(2)    <---------ICU4                     <---------YAB1   ccctcctccattcttcttccctaagctcgagcatctcttcagaatctgcttcagcattgctgtttgagtgagttttgaagttttcttcattatagccatt  16582800                                   <---------ANAC46                                 *TSS   --------->At4g35610                     ---------->DOF2                                            <---------ARR14(2)                   --------->CCA1(2)                                            --------->ARR11(3)            ------>ZmHOX2a(1)  <-------GAMYB                                    --------->ARR14(2)            --------->LBD16    <---------ANAC58                               <---------MYB46(3)  ---           --------->TOE1(2)   <---------ANAC58                            <---------ANAC46<---------At4g35610        --------->ARR14(2)    <---------MYB46(3)                          <---------MYB46(3)     <---        <---------ARR14(2) <----------DOF2                           <------ZmHOX2a(1)     <-------GAMYB   tgtttttggggttcctgagagataaaagtctttggttgtgtttagggagagagagagagagttatggagaaggagatgggtggatattgagggagttgag  16582900                   <---------GLK1(2)                   --------->ARR11(3)          <---------YAB1          ----------->TBP        --------->YAB1      <-----------TBP                                         <---------ANAC46                      -    <---------AHL20(2)                                      <---------DOF5.7(2)              <-------TEIL   --------->ARR11(3)                                       --------->MYB52(1)             <-------MYC3   <---------ARR11(3)                                    <------MYB46(1)                   ------->MYC2   <---------AHL20(1)                                    <------MYB83                      <-------MYC2 -------->GT1      <---------ARR11(3)   --------------->AtSPL8<---------ANAC55(2)          ------->MYC3 ---ZmHOX2a(1) ---------->DOF2   <----------DOF2        --------->MYB59                    ------->MYC4   gagtatatatttataaataaagattttgtaatgggctatttgtctgtacatatttgtgtaggtaacgtatagagagagagagacatgaagacatgtgcat  16583000                                                 <---------AHL20(2)                              ----                                                 --------->AHL20(2)                            ------                                       <---------At4g35610                                     ======                                       --------->At4g35610         ==================================                                       <---------ZAT2 <---------AHL20(2)                      -------                  <---------PCF2       --------->ZAT2 <---------YAB1 <----------DOF2          <------               --------->ALFIN1        ----------->RAV1(2)      ---------->ID1        <------NtERF2               <---------ANAC46        ===============================RAV----------->HVH21   --------            <---------AtMYB61  ---------->DOF2  --------->AHL20(2) ------>ZmHOX2a(1)--------->PCF5            --------->ALFIN1--------->TOE2(3)<------ZmHOX2a(1)<------MYB83          <---------PCF2        <------ZmHOX2a(1)  ----------->GT1 <---------TOE2(3)  <------MYB46(1)  <-----------RAV1(1) -- -------->ALFIN1<---------MYB46(3)   <-----------RAV1(2)  <-----------RAV1(1)  ======================   atgtgtggaaggagatggtgggagccaaaatgttaaaggccagctgaggatttaatttcattgttggtcctctttgtgacattgtggccccttctgatct  16583100     ------>ZmHOX2a(1) ------->RAV1(2)                                                                  --------->ANAC55(2) >ZmHOX2a(2)                                                                      --------->ANAC55(1) ===========HOX2a_HOX2a                                                           --------->ANAC46 =HOX2a_HOX2a                                                                     <---------ANAC55(2) -->GLK1(1)                         <----------DOF2                               --------->ANAC58 ---GLK1(1)                         ------>ZmHOX2a(1) <----------DOF2             --------->ANAC58 ->ARR11(3)                     <---------ARR11(3)<----------DOF2        --------->ANAC46 ---->ZmHOX2a(1)               <---------CCA1(2)<---------TOE1(2)--------->AHL20(2) ========RAV           <---------ICU4          ------>ZmHOX2a(1) <---------AHL20(2)  ------->TEIL   cctggtccttaccaagattacaccataaatactatatccttttcatttcctactttctttttcttagttaaatacacttcaaacacgtatgtgactactt  16583200                                           --------->ANAC58                                           --------->ANAC55(2)                                    ---                                           <---------ANAC55(2)                                 ------                                           --------->ANAC58                              ------>MYB46(1)                                           <---------ANAC46                              ------>MYB83                                           ----------->GT1                             ------->GAMYB                                       <-----------HVH21                               <---------ALFIN1       --------->MYB52(1)     ----------->GT1      <---------AHL20(2)                 <---------MYB55(2)    --------->YAB1           --------->ANAC58      --------->AHL20(2)                 --------->MYB46(3)  --------->AHL20(2)         --------->ANAC58    <---------AHL20(2)         <---------YAB1     <----- --------->YAB1              --------->ANAC46 ------->TEIL  --------->TOE2(3)       <-----------GT1   gaataaaaataagggcctaaaaatagtttacaaggaaaaacagtcacgtatatttttatatttcttaactcaaatactataagtgataaccacccttcta  16583300                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(1)                                                                                 --------->AHL20(2)                                                                      --------->GLK1(2)                                                                      <---------ARR11(3)          --------->YAB1                                              <---------ARR14(3)   <---------MYB52(1)                                                 <---------ARR14(2) ----------->GT1                  <-----------GT1                     --------->ARR14(2) --------->MYB.PH3(1)            <---------AHL20(2)                   --------->ARR11(3) --->HSFB2a(2)                  --------->AHL20(2)            --------->YAB1     <---------AHL20(2) ----HSFB2a(2)            --------->YAB1     --------->AHL20(2)       --------->ARR14(3)   aaaccgttactatcatgtagaaagacaatgaaaattttatcttccatatatatactaaattgaatcatcgaaaatcttcaaaatttaatggtagaagaaa  16583400  Previous    Next  AGI:  At4g34760.1    Description:  auxin-responsive family protein. similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT2G16580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82489.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 16582188    to: 16582884    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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