Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------ATHB12                          <<<<<<<<<ARR1                          <<<<<<<<<ARR2              --------->ARR11(3)                  <---------YAB1                     <---------ARR11(3) ----->AHL20(2) <-----------GT1                --------->YAB1<-------GAMYB ---->GT1   <---------TOE2(3)                <---------ARR11(3)                     --------->YAB1 --->GT1 --------->ARR11(3)--------->YAB1    --------->ARR11(3)----------->HVH21   <---------YAB1   taaattttgtagataatgttacgatacaatcatacaaaaaaaaacaatatcatgagatacttgggttgacatcaaatgtttttttatcatcgacaaaatg  16514900                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                       --------->AHL20(1)                                                       <---------AHL20(1)                                                       <---------AHL20(2)                                                       --------->AHL20(2)                                                   --------->AHL20(2)                       ------>ZmHOX2a(1)           <---------AHL20(2)        <---------MYB52(1)               ------->TEIL  ---------->DOF2      --------->AHL20(2)      <-------TEIL         <-----   ----------------------->TaNAC69(2)        --------->YAB1 <---------AHL20(2)    --------->ATHB12 --   ttggaagtagtgggatgcacttctcctaatacaaagacatatttctctcatatttaatttatttacttagaaacgattcgttgttcattagtttaaaact  16515000                                                                                      <---------ARR11(3)                        --------->ATHB12                                              <---------AHL20(1)                       <---------AHL20(2)              <---------AHL20(2)             --------->AHL20(1)                       --------->AHL20(2)          <---------------AGL15              --------->ARR11(3)          --------->AHL20(2)                       --------------->AGL15   --------->ARR14(2)          <---------AHL20(2)              --------->DAG2                   <---------ARR14(2)       ------->TEIL <------ZmHOX2a(1)    ---------->DOF2                  <------ZmHOX2a(1) ----MYB52(2) <---------AHL20(2)      --------->HSFB2a(2)              <------ZmHOX2a(1) ------->ZAT6--------->AHL20(2)       <---------HSFB2a(2) <---------TOE2(3)--------->ZAT18  <--------   aactctatgtatttatttaataggattaattggattttttctaaaaagtatttctatattatggaaaacagtaggaggaccctgtcaatatatagattgt  16515100                                                                         <---------MYB52(1)       ---                                                           <---------ARR11(3)                    <---                                      <---------ANAC58     --------->ARR11(3)                    ----   --------->YAB1              <-----------GT1  ------->TEIL      <---------At4g35610  <---------ATHB12 -GLK1(2)           --------->ETT(2)  <---------ANAC58   <---------MYB52(1)        --------->LBD16<--   tagaatcagaactaaatagttgtctacatgttttcaccttgcttcaaatgagcctctccattatcttcagcctcccttacctctccccaaacaatcttct  16515200                 <---------AHL20(2)                 --------->AHL20(2)              --------->AHL20(2)             --------->AHL20(2)           --------->YAB1                                       ------>ZmHOX2a(1)     ----------->GT1                                           --------->TOE2(3)    <---------TOE2(3)                                         ------>ZmHOX2a(2) ------------>AGL15                                         <---------ARR14(2) --------------AGL1                                         --------->ARR14(2)                  <---- ------------->AGL1               <---------GLK1(2)    <----------DOF2                        <------ -------------AGL15    <-----------GT1        <----------DOF2<------ZmHOX2a(2)       <-----------GT1<   ccaatagaggtaaaaataaaaaaataaactctctcaaattctctctagctttctcatctttggatcctaaaacacattttggtcatttaactcatcttga  16515300                                                                                  <---------YAB1                                                                              <------MYB46(1)                                                                              <------MYB83                                                                              ----------->GT1                --------->YAB1                                               --------->MYB46(2)                --------->ATHB12                                             --------->MYB111(2)                <--------HAHB4                           ------>ZmHOX2a(2)   --------->MYB111(1)                <---------ICU4                           <---------ICU4<---------ANAC58       <-------TEIL                                    --------->ARR11(3)    --------->MYB59 -----GLK1(2)  --------->ICU4                          <---------ARR11(3)   <--------P       -------- ---YAB1  <---------At4g35610                      --------->ANAC55(2) <---------ANAC58  <---------ANAC46 ----------DOF2<---------ATHB12 *TSS       <----------DOF2<----------DOF2   <---------MYB55(1)   ttctttagattcatctaatcatttctcatgcgatttcgatctaagcttttcttaagtgatctttacaatgttgtcttggtaggtattatcgccgtgtgaa  16515400                                  --------->AtMYB61                                  <---------MYB59                                 <---------RVE1(1)                           <---------ANAC46                         <----------DOF2                <---------At4g35610        <--------P           ------>ZmHOX2a(1) <---------CCA1(1)    ----------->GT1   <---------ICU4------>MYB46(1)           <---------ANAC58   <---------ARR11(3) --->HVH21      --------->At4g35610 ------>MYB83              <---------ANAC58   --------->ARR11(3)   acagagtgcttaaaactcatctaaccatggctgagaccaaacctggttagtattttcatacatttcctgcctttattcacagagatatttcttaagtcta  16515500                                                                    --------->At4g35610                                                                  --------->ZAT18                                               <------ZmHOX2a(1)--------->At4g35610             -----                                       <------ZmHOX2a(1)        --------->ZAT2              ------->TEIL                   --------->YAB1   <------NtERF2            --------->CCA1(2)    ----------->GT1                --------->WOX13(1)--------->ETT(1)        ----------->ARR10       <----------ID1-----            ----------->GT1       <---------ANAC46 --------->ARR11(3)         ---------->DOF2 -------     <-----------GT1            <-----------HVH21  <---------ARR11(3)      >>>>>>>>>TBF1  <-------TEIL   atgcaaattacaaattgttaatcagaaatagagatgtcggaggaagagaggaagatagtgaagataagctcgctgaagaagaaagcgataaatgcatcca  16515600                                                                                                -----                                          --------->ZAT2                                        <----                                          <---------At4g35610                            ------>ZmHOX2a(2)                                          --------->At4g35610                           <------ZmHOX2a(2)                                          <---------ZAT2                               <---------ARR14(3)                                         ----------->RAV1(1)          --------->ANAC58 --------->ARR11(3)                                       --------->ZAT2                 --------->ANAC58 <---------ARR14(2)         --------->GLK1(1)             --------->At4g35610           --------->SPL7    <---------ARR11(3)         <---------GLK1(1)          --------->At4g35610             ===========================HOX2a_HOX2a        <---------ARR11(3)       ---------->DOF2                    ============================HOX2a_HOX2a        --------->ARR11(3)   <---------DEAR3(1)                     <------ZmHOX2a(1)  --------->ARR14(2)   <-------TEIL            <-----------HVH21                <---------YAB1             --------->ARR14(3) ------>RAV1(1)          --------->DAG2<---------At4g35610 <-----------------AGL1    ----------->ARR10 ---->MYB52(1)         ---------->DOF2----------->RAV1(1)  ----------------->AGL1  <---------At4g35610 -->MYB46(3)  ------>ZmHOX2a(1)<------NtERF2             <---------MYB52(1)      <-----------RAV1(2)   acagattcaagaactccttcaagaaaaaaggtcggagaagcagcagcagagtcatgtccgttccgattgaggacgacattgacgcagaagatcttcaagc  16515700                                                                                     <---------AHL20(2)                 --------->ARR11(3)                                                  --------->AHL20(2)                 <---------ARR11(3)                                              <---------AHL20(2)            --------->WRKY18(1)                                                  --------->AHL20(1)      <----------DOF2                                               <---------YAB1  <---------AHL20(2)      <---------DAG2       ----------->HVH21              ------>ZmHOX2a(2)      --------->AHL20(2)     <---------ANAC58    --------->TOE2(3)               --------->GLK1(1)      --------->AHL20(2)     <---------ANAC58  <---------YAB1                   <---------ARR11(3) --------->At5g28300 ---->ARR11(3) --------->ANAC58            --------->AtLEC2  <---------ALFIN1   <---------AHL20(2) -----ARR11(3) --------->ANAC58    <----------DOF2      --------->ARR11(3)----------->GT1<-----------GT1   tcttgatgcttttcgtcaagctcttatccttgacgagcttttgccatccaaactcgatgatctccacatgatgcttcggtaaaaaaattattttccctat  16515800  Previous    Next  AGI:  At4g34580.1    Description:  transporter. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT2G16380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48321.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074) Range:  from: 16515332    to: 16519539    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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