Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->YAB1 -------ANAC55(2) ------>ANAC58                                ---------->DOF2 -------->GT1                  --------->MYB52(1)                ----------->ARR10 ------>ANAC58                 -------->P --------->ANAC58     --------->LBD16               -------- ------>ANAC55(1)         <---------ALFIN1--------->ANAC58    <---------ANAC46       <----------ID1 ------>ANAC46         <-----------GT1    --------->ANAC46   <---------LBD16         ----------->GT1 ------>ANAC55(2)     --------->ZAT18 <---------AHL20(2)  <----------DOF2          ---------->DOF2   acgtaaaatgcaaacatagtcaagttcaccacttaccgatttaaacgctaaaggtagagtctttgcggagttttgcaaacacctaaaaagaaaaaccaaa  16513900                                                       ---------->DOF2                                                   <---------CCA1(2)                                             ------>MYB46(1)                                             ------>MYB83           --------->DAG2                 --                       ---------->DOF2     --------->AtMYB61       --------->MYB52(1)     ----------- ->AtMYB61       <---------GLK1(2)         <---------MYB59 ----------->GT1       ------>ZmHOX2a(1)<--   acttcagacgagaattacagaatttcaaagacaaaacgctcaagaccaaactcatatcaaagtgtgaaataaggggataagtcctcaaaacaatgacaga  16514000                                                <----------DOF2                                             --------->ANAC58                                             --------->ANAC58                                        --------->ANAC58                                        --------->ANAC46                                        --------->ANAC58                                   <---------YAB1                                  --------->AHL20(2)    <---------TOE1(2)            --------->CCA1(2) ------->GLK1(2)     <-----------GT1--------->YAB1                     <---------DAG2 >HVH21       --------->AtLEC2  --------->ARR11(3)                     <----------DOF2     --------->MYB46(3) -------GLK1(2)  ------->TEIL   <---------ARR11(3)           ------->TEIL    --------->WOX13(1)   gattcttatgttcttcatgcatttatccatataagatataataagccaagctttctatttctgaatctaaatactttatcaattactaaaacaacaactc  16514100                                                               <---------WOX13(1)                                                             --------->ATHB12                                                             <---------ICU4                                                            --------->ICU4                                                          --------->YAB1                  --------->ZAT18                   --------->ANAC46                  <---------ZAT14                   --------->ANAC58         --------->ATHB12                           --------->ANAC58       --------->TOE2(3)                       <---------ARR14(2)     -------->P <---------GLK1(1)              ------->TEIL <---------YAB1    <-----------GT1                            <-----------ARR10    --------->MYB52(1)  ------>MYB83           --------->ARR14(2)  <---------MYB52(2)    ------>MYB46(1)--------->YAB1    <-------TEIL                              <-   cataactaacctcattggagttcaccaaattcaatccccattcagagtgaatctacgcattcatgattgcaaacagaggcaaaatcgacagaaacaaatt  16514200                                                                                   <---------At4g35610                                                                                   <---------SPL7                                                          --------->ANAC58         --------->At4g35610                                                   --------->TOE1(3)               <------NtERF2                                                   --------->TOE2(3)     <---------ANAC58    --------->YAB1                           --------->TOE2(3)           <---------ANAC58     <------   <-------TEIL  <-----------GT1             --------->TOE1(3)           <---------ANAC46    <------- --------At4g35610                  --------->GLK1(2)     --------->ANAC58       <---------RAP2.6(2)   cagcattcatattgtttttttacaaaaaaaaaactgagattccaaaaccctaaccttgagacgaaatcaaacgtagcgtcttggccgctcggggcttcgg  16514300                        --------->RAP2.3(1)                        --------->ATERF1(1)                        <------NtERF2                       ------>NtERF2                                                           <-----                       <---------ATERF1(1)                                                   <-------                       <---------RAP2.3(1)                                                   <-------                      <---------DEAR3(1)                                                     --------                     --------->ATERF1(1)                                                    ---------                    <---------ATERF1(1)                                                     ---------                   ----------->HVH21                                                       <---------YAB1                  --------->ATERF1(1)                                                     --------->AHL20(2)              <------NtERF2                                                              --------->ATHB51             ------>NtERF2                                                               <---------ICU4             --------->LBD16                                                             --------->YAB1             <---------MYB46(3)                                                         <---------YAB1            <---------ANAC46                                   >>>>>>>>>TBF1     --------->MYB46(3)       --------->MYB52(1)                       *TSS     >>>>>>>>>TBF1       --------->At4g35610 ----------->GT1 <---------ATERF1(1)            --------->AHL20(2) ----------->GT1      --------->ICU4 ---ANAC46 <---------LBD16------>NtERF2         <---------AHL20(2)>>>>>>>>>TBF1  --------->DEAR3(1) --LBD16 --------->ANAC46--------->DEAR3(1) ----------->GT1 >>>>>>>>>TBF1  --------->YAB1<--------HAHB4   agagggtataaacggcgggagacgacggcgactgagtcacactgagtcgtttaaatgaagaagaagaagaagaaaaatcagcatcgacccattattatat  16514400      ----------->RAV1(2)   <------NtERF2 ----------------->AGL1 -------CBF                                           ---------->DOF2 --AHL20(1)                                        --------->AHL20(2)                             --- --AHL20(2)                  <---------HSFB2a(2)   --------->YAB1                             ------- ->AHL20(1)  ----------->GT1 --------->HSFB2a(2)  <---------YAB1                              <------ >YAB1--------->At4g35610 <----------DOF2      <---------AHL20(2) <---------YAB1     <---------ANAC46 >AHL20(2) XXXXXXXXXXXXXXXXXXXX>MIR319C     ----------->GT1  ----------->GT1     <-----------HVH21<--   tgggcctcaactggaccgaaaataggcccttttagaaacgattccaaagttaattataaagaatagttaatattgaaatagtttgtcatgtgtatcactt  16514500                                                                            <---------AHL20(2)                              ----------->GT1   <-----------GT1       --------->YAB1 ------>ICU4         <---------ANAC46     ------>ZmHOX2a(1)         <---------WOX13(1) -->ANAC55(2)     <---------ANAC58  <---------ICU4               <---------YAB1 ---ANAC55(2)     <---------ANAC58 <---------YAB1          <---------AHL20(2)            ---------->DOF2 -------YAB1     ---------->ID1    --------->ICU4          <---------YAB1  --------->AHL20(2)   attattagatcgaatttttggcttcttgtacaatgttataattcctgtagtaacctattgtataattgtgaatgatatataatatgtgaacaaaagaaac  16514600                                             <---------ANAC46                                       --------->ALFIN1                                             -                                      <-------MYC3                                                 <-                                <-----------GT1                                              --------                --------->DEAR3(1)    ------->MYC3      <---------ARR11(3)                   --------      ------->TEIL            <---------ARR11(3)       <------ZmHOX2a(1)                  <----------     <---------CCA1(2)        --------->ARR11(3)    <---------LBD16                     --------->AHL20(2)   --------->ANAC55(2)      ---------->TaMYB80  ------->TEIL        <---------YAB1----------->GT1<---   aacttatgtatcttagcaccgtctatggggaatatcaccatgtggtgatgtatttcaggatatatcatttacaattagtttgaagggaaattaaacctta  16514700                                         --------->AHL20(2)                                         <---------AHL20(2)                                      <---------ICU4                                     --------->ICU4                                   --------->YAB1                                  <---------YAB1                                --------->YAB1 -------->GLK1(2)               -------->HAHB4 --------GLK1(2)               --------->ICU4                                                 ------- ->TOE2(3)     ----------->GT1 ----------->GT1      >>>>>>>>>>>>>>>>>LFY              ----------->GT1 ->TOE1(3) --------->AHL20(2)  <---------YAB1      <-----------GT1                 ------->TEIL -GT1     <---------YAB1   <---------ZAT14    <------MYB83                    <---------At5g28300---- ------YAB1<---------AHL20(2)--------->YAB1   <------MYB46(1)                <-----------GT1 --------   agattcttggttattaattgttaatagactgtaatgataatatttatttggtttttccattgtttactataaactaaattcactgtatgtgtaaaaagtt  16514800  Previous    Next  AGI:  At4g34570.1    Description:  THY-2 (THYMIDYLATE SYNTHASE 2). Identical to Bifunctional dihydrofolate reductase-thymidylate synthase 2 (THY-2) [Arabidopsis Thaliana] (GB:Q05763;GB:Q0WT35); similar to THY-1 (THYMIDYLATE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT2G16370.1); similar to CM0216.390.nc [Lotus japonicus] (GB:BAF98221.1); similar to Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase ; Thymidylate synthase ] (GB:P51820); similar to dihydrofolate reductase-thymidylate synthase [Pisum sativum] (GB:CAD38046.1); contains InterPro domain Bifunctional dihydrofolate reductase/thymidylate synthase; (InterPro:IPR012262) Range:  from: 16511006    to: 16514348    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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