Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->ARR11(3)                                                        --------->CCA1(1)                                                        --------->RVE1(1) ------>MYB83                                                 <------MYB83             ------>MYB46(1)                                                 <---------ANAC55(2)     --------->WOX13(1)                                                 ----------->GT1     --------->ANAC58              <-                                                 <---------ANAC46    --------->ANAC58              <-                                                --------->MYB46(2)   --------->ANAC46              <-                                           --------->AHL20(2)      <---------ALFIN1       --------->YAB1                                           <---------YAB1<---------ARR11(3)  <---------YAB1       ---                            <----------DOF2<---------AHL20(2)      --------->ANAC58       <---------ICU4                  --------->DAG2          --------->AHL20(2)       --------->ANAC58      <---------YAB1                 ---------->DOF2          <---------AHL20(2)    --------->ZAT14        --------->YAB1             <---------TOE2(3)      ------->GAMYB<------MYB46(1)--------->ZAT18       <---------AHL20(2) -------->AGP1----------->GT1    <-----------GT1--------->MYB59 <---------ZAT18  <-------TEIL     <--   cagagctattgaaatgaggtaaagtgttttctttgtaaccccattttaattaggtgaaatatctagcgcacacaccaatctgattcatataatcataact  16498000                                                               ------->MYC3                                                               <-------MYC3                                                               <-------PIF4                                                               <-------MYC2                                                              ==========================bZIP_DOF                                                              <---------ANAC58                                                              <---------TGA1a                                                              ==========================bZIP_DOF                                                              --------->TGA1a                                                    ----------->HVH21                                                   ------->PIF5<-------PIF5                                                   <-------PIF5------->MYC2                                                   ------->MYC2------->MYC4                                                   <-------MYC2<-------MYC4                                                   <-------MYC3------->PIF5                                                   ------->MYC3------->PIF4                                                  --------->ANAC58                                                  <---------ANAC55(2)                                                  --------->ANAC46                                                  --------->ANAC55(2)                                                  --------->TGA1a                                                  <---------TGA1a                                                  --------->ANAC58           ---------->DOF2                                                  ======================bZIP_bZIP                                                  --------->bZIP60(2)      <---------YAB1                                                  ======================================bZIP_DOF                            <---------ZAT6        ======================================bZIP_DOF --------ANAC58       <---------YAB1              --------->O2<---------ANAC58                   ---- --------ANAC46   <---------YAB1                <------------OsbHLH66    --------->YAB1          ---- --------ANAC58 --------->AHL20(2)              <---------ALFIN1      ------>ZmHOX2a(1)        ------ ------>STY1(2) <---------AHL20(2)        --------->AtMYB61   --------->ANAC55(2)      ---------->DOF2 -------STY1(2)<---------AHL20(2)--------->REM1(1)<---------O2<---------ANAC55(2)    --------->TOE2(3)   agcttgtaaactacaaaattatttttcattgtgttacaactagaccattcccacgtgaccattcacgtgctcctataatgaaagaaacctaaagaagaga  16498100                                                                                 <---------ANAC46                                                                                 <---------ANAC55(1)                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC46                                                                --------->YAB1   --------->ANAC55(1)                                                        <-----------GT1          <---------ANAC58                                                 <------ZmHOX2a(2)               --------->ANAC55(2)                                                 --------->CCA1(2)               --------->ANAC58                                                <---------ARR14(2)               <---------ANAC58                                                <---------ARR11(3)               ----------->GT1                                                --------->AGP1 <---------YAB1    --------->ANAC58                                            --------->YAB1--------->ZAT6       <-----------GT1 ----->ANAC58                  ------>ZmHOX2a(1)--------->ARR14(2)        <---------CCA1(2) ----->ANAC58                  <----------DOF2  --------->ARR11(3)     <-------TEIL    <---------AHL20(2) --->CCA1(2)                   =========================HOX2a_HOX2a   --------->AtLEC2--------->ICU4   cgctccaattcgcatagacatcccaagcttatcctttcttagtgaatcaagatccaatttacactataatacatgcatatattacgtaataaatgtttta  16498200                                                                  --------->YAB1         <---------ARR14(2)                                                                 <---------YAB1          --------->ARR14(2)                  <---------------AGL15        --------->YAB1  --------->YAB1            <---------GLK1(2)                  --------------->AGL15        <---------ICU4  <---------ICU4          --------->LBD16                 ----------------->AGL3       <---------ATHB12<---------ATHB12        <---------HSFB2a(2)                 <-----------------AGL3     --------->WOX13(1)--------->ICU4          --------->HSFB2a(2)         <-----------HVH21        <-----------GT1           --------->WOX13(1)---------->DOF2   taagttttctgtgtcactcactatttttagttattttctcaattttcaatcatcgcaaatatcaattatcacaaaacatataaagtttccagatttgtat  16498300       <---------DAG2                       ----------->HVH21        <---------ARR14(2)       <---------MYB59                    --------->At4g35610        --------->ARR14(2)       --------->TOE2(3)                  <---------At4g35610   --------->ARR11(3)      <----------DOF2     -------->P                           <---------ZAT2        <---------ARR11(3)     <---------DAG2     ------>MYB83                    <---------ZAT14           --------->RVE1(1)      <--------------     ------>MYB46(1)                 <-------TEIL          <---------YAB1------>ZmHOX2a(1)   <---------MYB59      ------->TEIL --------->ZAT14       ----------->TBP          <---------ALFIN1   atgggcctaccttattagatgcgatgaatatggactaagtacagagctgatggtttttgttataaatatcgtttcctcttctaccctcacctttactctg  16498400                                                                                            <--------                                                                <---------TOE2(3)          <---------DAG2       <---------ALFIN1       --------->ANAC46                 <---------DOF5.7(2)     ----------->HVH21 <----------DOF2              --------->ANAC58               --------->DOF5.7(2)     --------->At4g35610 ----------ANAC81             --------->ANAC58     ---------->DOF2  <---------YAB1 <------ZmHOX2a(1)   tttctttctccactctctctctctctcgttgcaagcaacttgttttctgaatccaaagaagacgataacgatgaatggagctataggaggtgaccttttg  16498500                                                                                       <----------DOF2                           <----------ID1                                         <------NtERF2------                       ---------->DOF2                                           ------>NtERF2<------                      ------>ZmHOX2a(1)                                          <---------ATERF1(1)                 <---------DEAR3(2)                                             --------->ATERF1(2)                <---------DREB2C(2)                                             <---------ATERF1(2)               --------->DDF1                                                   --------->DEAR3(1)              <-----------HVH21        <---------ALFIN1                         <---------DEAR3(1)           <---------bZIP60(2) ---------->DOF2                                 <---------LBD16<------          <<<<<<<GRF7 <---------HSFB2a(2)                  <---------ALFIN1    --------->DEAR4(2)        ------>ZmHOX2a(1) --------->ZAT18          --------->TOE2(3)      ------>ZmHOX2a(1)   -------    <-----------GT1   --------->HSFB2a(2)        ------->TEIL      <---------GLK1(2)<----------DOF2 --DOF2 ----------->HVH21 <---------ZAT18--------->At4g35610   <----------DOF2 --------->ATERF1(1)   ctcaattttcctgacatgtcggtcctagagcgccaaagggctcacctcaagtacctcaatcccacctttgattctcctctcgccggcttctttgccgatt  16498600               --------->ATERF1(1)               <------NtERF2              <---------RAP2.3(1)              ------>NtERF2              <---------ATERF1(1)              <---------DEAR4(2)              <---------ERF1             --------->ATERF1(2)             <---------RAP2.3(3)             <---------RAP2.3(2)             <---------ATERF1(2)          --------->ATERF1(2)          <---------ATERF1(2)         <---------LBD16        --------->MYB52(1)    <--------ATHB1    --------->YAB1    <---------ICU4    --------->ATHB12    <------------ATHB5                                                     ----------->HVH21   <---------YAB1                                             <---------------AtSPL3   <---------ATHB12        <---------At4g35610            <---------At4g35610   --------->ICU4          --------->At4g35610     ------->TEIL   ------->TEIL   --------->ALFIN1 --->ARR14(2)--------->DEAR3(1)                   <---------CCA1(2)  <-----------HVH21<------MYB83 ---ARR14(2) <---------DEAR3(1)             <---------RAP2.6(3) <---------SPL7<---------DEAR3(1) ---GLK1(2) <---------ABI4(1)               <---------DEAR3(2)<---------------AtSPL8  <------MYB46(1) -->ARR14(2)--------->ATERF1(1)          --------->MYB52(1)  <------------------SPL14 ----------->GT1   cttcaatgattaccggcggcgagatggacagctatctttcgactgccggtttgaatcttccgatgatgtacggtgagacgacggtggaaggtgattcaag  16498700                                                                                ---------->DOF2                --------->DEAR3(2)                                         <---------ANAC46              --------->ARR14(2)              --------->ANAC58           <---------ANAC58              <---------ARR14(2)            --------->MYB52(1)           <---------ANAC58             <------NtERF2               --------->ANAC58                <---------ANAC46            --------->LBD16              --------->ANAC46               <-------TEIL           --------->LBD16               --------->ANAC58           <---------TOE1(3)          <---------LBD16      ----------->GT1--------->ANAC58      <---------TOE2(3)   actctcaatttcgccggaaacgacgcttgggactggaaatttcaagaaacggaagtttgatacagagactaaggttcgtgtgtaaagaaaacttaagttt  16498800                                   <---------TOE2(3)                          ------>ZmHOX2a(2)                               >>>>>>>>>ARR1                         <------ZmHOX2a(2)                                >>>>>>>>>ARR2                        --------->ARR11(3)                                >>>>>>>>>ARR2                        --------->AGP1                                   <------ZmHOX2a(1)                        <---------ARR11(3)                              <---------YAB1                        <---------AGP1--------->CCA1(2)                <---------TOE2(3)             ---------->DOF2   <----------DOF2            <---------ANAC46>>>>>>>>>ARR1           ---   <---------HSFB2a(2)  <-----------ARR10   <----------DOF2        <----------DOF2         >>>>>>>>>TBF1   --------->HSFB2a(2)  --------->ARR14(2) <---------ANAC58    <---------ZAT18          >>>>>>>>>TBF1  <-----------------AGL3<---------ARR14(2) <---------ANAC58    --------->ZAT18    --------->YAB1-----   aagttctataaatgaaaaagaaaacagatcttactttgagatttggcttatctgtttcttctgtgtgtgcttttaggattgtaatgagaagaagaagaag  16498900  Previous    Next  AGI:  At4g34530.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G68920.2); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G68920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47615.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 16498396    to: 16500179    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g34540.1    Description:  isoflavone reductase family protein. similar to isoflavone reductase, putative [Arabidopsis thaliana] (TAIR:AT1G75280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47610.1); contains InterPro domain NmrA-like; (InterPro:IPR008030); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 16498396    to: 16502179    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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