Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ICU4                --------->ICU4                <---------YAB1                             <-------TEIL              --------->YAB1                           --------->ARR11(3)           <---------bZIP60(1)                     ---------->DOF2           --------->bZIP60(1)                 ------>ZmHOX2a(2)           <---------TGA2(1)                 <---------ARR11(3)                 ---------->DOF2     <---------TOE2(2)                    <---------WOX13(1)                 <------ZmHOX2a(2)     --------->MYB59                    --------->ATHB12--------->CCA1(2)   --------->ARR11(3)     <---------TOE2(3)                 <---------YAB1  <---------ARR11(3)   <---------ARR11(3) ----->GT1 --------->REM1(1)  <----------DOF2--------->ARR11(3)       --------->ANAC46   tcaaacttaggttacatcataatgggccaattctttgagttgtgattgatctccaaagatatacatagatttacacaagatcaaaagaaaaacaattggg  16491400                                      --------->GLK1(2)                                     <---------GLK1(2)                              <--------HAHB4                              --------->YAB1                             <---------YAB1                       <-------TEIL<---------YAB1              <---------CCA1(2)    <---------TOE2(3)                                           <-----        --------->ANAC58   --------->YAB1 <----------DOF2                        --------->ARR14(2)        --------->ANAC58 <XXXXXXXXXXXXXXXXXXXXMIR172E                            <-----------ARR10   cctaaaccccaagcccatatcaacgtccattatcattaagattcctttttttcttgaaatttgaaaatttgaaattcgattcaaatctactctctctgtt  16491500                                                                                   ------>NtERF2                                                                                  <----------ID1                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                  <---------bZIP60(1)                                                     --------->ARR11(3)           --------->ANAC46                           --------->HSFB2a(1)       <---------ARR11(3)        ----------->HVH21           --------->GLK1(2)            <----------DOF2                      --------->ANAC46--------           <---------ARR11(3)           <---------DAG2         <---------MYB46(3) --------->bZIP60(1)          --------->RVE1(1)<---------HSFB2a(1)      <---------GLK1(1)   <---------ARR14(2)  ---------       --------->YAB1      --------->HSFC1(2)       <---------CCA1(2)   --------->ARR14(2)<-------TEIL      ----------->TBP      <---------HSFC1(2) ------>ZmHOX2a(1)--------->MYB52(2)--------->RAP2.6(3) ----MYB52(1)            <---------GLK1(2) ---------->ID1    <---------MYB52(1)----------->TGA1   tttttcccataaaaatctgaaaaaccagaagcttcttcatcacttttcctcttgatatcttccattagttggccgatacacatgacgccaaatacatcaa  16491600                                          ----------->RAV1(2)                                         -------->P                                         ------>MYB46(1)                                         ------>MYB83                                        ------>MYB46(1)                                        ------>MYB83                                      <---------MYB111(1)                                      <---------MYB55(2)                                      --------->MYB46(3)   <-----------ARR10                 --------->ANAC46 ------>NtERF2                       --------->ANAC58 ---->CBF                            --------->ANAC58              ----------->TBP <---------YAB1 >TOE2(3)    <---------MYB52(1)    <---------ALFIN1          <---------ANAC46  <---------DAG2   tggcgactcttctctgttttttagttatatcaaactcccacccaacctgcagaagaaaaaatggtgtctataaacacatccccttacgatttcttctcta  16491700                         --------->ANAC58                         --------->ANAC58                         --------->ANAC46                     --------->ANAC46                     --------->ANAC58                     --------->ANAC58     <---------GLK1(2)                  --------->ARR14(2)  <-------TEIL<---------ICU4                   <----------DOF2                  <---------ARR14(2) --------->GLK1(2)                       --------->GLK1(2)               ----------->TBP      <---------ARR14(2)                      --------->ARR11(3)          --------->GLK1(2)         --------->ARR14(2)  --------->YAB1      <---------GLK1(2)   <----          <---------ARR11(3)        <---------GLK1(2)  <---------YAB1 <---------YAB1       <---------   tctctctcacagtatctatatatacgcacacaaacccagattcagtttctcatcagtatcatcaacaaaaatatcaaagattctgctttagaaactgtcc  16491800                               --------->ANAC58                               --------->ANAC58                            --------->LBD16                          <---------LBD16                          ------>ZmHOX2a(2)                         --------->ARR14(1)                         --------->CCA1(2)                         <------ZmHOX2a(2)                        --------->ARR11(3)                        <---------GLK1(2)                        --------->ARR11(1)                        --------->AGP1                        --------->ARR14(2)               --------->ZAT6                        <---------ARR14(2)              <---------YAB1                      ----------->ARR10            <------MYB46(1)              <---------ARR14(2)          <-----------HVH21              --------->ARR14(2)         --------->ANAC46<-----------GT1             ===================HOX2a_HOX2a        <------MYB83 -----AtLEC2 ====================HOX2a_HOX2a   <---------ZAT2              <----------DOF2 ---AtMYB77  <------ZmHOX2a(1)--------->SPL7   --------->ZAT2              <---------DAG2     ------>ZmHOX2a(1)   atggatgctaatggaggacctgtacagatccggacccaaaactacgtcaagcttggttatcactatctgatcactcacttttttaaactcatgttcctcc  16491900                                                                                   <-----------TGA1                                                                     <---------LBD16 <---------ICU4                     ------->TEIL                            <---------YAB1<-------TEIL        >>>>>>                  <---------YAB1                           --------->YAB1<---------ARR14(2)   -------         <---------MYB52(1)                         <---------At4g35610  --------->ARR14(2)   -------       <----------DOF2                              --------->At4g35610--------->LBD16        -------   ctctaatggctgttttgttcatgaatgtctcattgttaagcctaaaccatcttcagctctattacaattccaccggattcatcttcgtcattactctcgc  16492000        ------>ZmHOX2a(2)        <-------TEIL       <------ZmHOX2a(2)                                                                         <---      <---------ARR14(2)                                                                         ----      --------->ARR14(2)                    -------->P                  --------->LBD16        ------    <---------DEAR3(2)                      ------->TEIL                ------>NtERF2          ------   --------->ETT(1)                   <-------TEIL<---------HSFB2a(2)  --------->ANAC58     --------- <-----------HVH21                   <------ZmHOX2a(2)                 --------->ANAC46     <-------- >>>>>>>>>>>LFY                     --------->AGP1--------->HSFB2a(2)------>MYB46(1)       --------->MYB59 -->ANAC58                          <---------ARR11(3)               ------>MYB83     --------->DAG2 -->ANAC46                          --------->ARR14(2)             --------->AtMYB61 ---------->DOF2 -->ANAC58                          <---------ARR14(2)   <---------YAB1--------->ANAC58 ------------>MYB.PH3(2)   cattgtcggatccattgtcttcttcatgtctcgacctagatccatctaccttctagattactcttgctacctcccgccttcgagtcaaaaagttagctac  16492100                                                                        <---------GLK1(2)                                                                       --------->ATHB12                                                                      <---------YAB1                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)                                                                  <---------ARR11(3)                                          --------->HSFB2a(1)     <---------ARR14(2)                                          <---------HSFB2a(1)     --------->ARR11(3)                                          --------->HSFC1(2)      <---------ARR14(3)                                          <---------HSFC1(2)      --------->ARR14(2)                                         --------->ARR14(2)       <---------AGP1    <-------TEIL                         <-----------ARR10        --------->ARR14(3) ------HSFB2a(2)                         <---------ARR14(2)     ----------->ARR10 ----->HSFB2a(2)                     --------->At4g35610      =============HOX2a_HOX2a --->MYB52(1)                        <---------At4g35610      <------ZmHOX2a(1) -->P                           <---------GLK1(1)         --------->LBD16 >At4g35610                    <---------ARR11(3)        --------->HSFB2a(2) -At4g35610--------->MYB46(3)  --------->ARR11(3)        <---------HSFB2a(2)   cagaaattcatgaacaactctagtttgattcaagatttcagcgaaacttctcttgagttccagaggaagatcttgattcgctctggtctcggtgaagaga  16492200                                                                                   --------->ZAT14                                                                                   <---------ZAT14                 <-----------GT1                     <---------ANAC46              --------->ZAT18         <---------ARR14(2)                        <---------ANAC46             <---------ANAC58         --------->ARR14(2)                       <---------At4g35610 --------->ANAC58         <-----         <---------GLK1(2)                     <---------At4g35610    --------->ANAC58--------->ANAC46       --------->LBD16               ------>ZmHOX2a(1)  --------->REM1(2)       <---------ANAC58<----     <---------LBD16           ------>NtERF2   <---------ZAT14      <-----------RAV1(2)      --------    <---------At5g28300        --------->LBD16 <---------ZAT2  --------->ALFIN1<---------DEAR3(1)    --------->MYB52(1)        <---------ALFIN1 --------->At4g35610 <---------ZAT2  <---------ZAT18   <-----------GT1           <---------LBD16   <------NtERF2  --------->At4g35610  --------->ABI4(2)   cttatttaccggattctattcactctatccctccgcgtcctactatggctgcagcgcgtgaagaagcggagcaggtaatcttcggtgcactcgacaatct  16492300  Previous    Next  AGI:  At4g34510.1    Description:  KCS2 (3-ketoacyl-CoA synthase 2); acyltransferase. Identical to Probable 3-ketoacyl-CoA synthase 2 (KCS2) [Arabidopsis Thaliana] (GB:O65677); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT2G16280.1); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT1G19440.1); similar to 3-ketoacyl-CoA synthase [Eranthis hyemalis] (GB:ABS18382.1); similar to hypothetical protein OsI_020301 [Oryza sativa (indica cultivar-group)] (GB:EAY99068.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47620.1); contains InterPro domain Very-long-chain 3-ketoac Range:  from: 16491801    to: 16493423    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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