Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ------>ZmHOX2a(2)                                                            <---------RAP2.6(3)     <----------DOF2 -NtERF2                                             ------->TEIL      <---------GLK1(1) -->LBD16                                         <---------YAB1      <---------ARR11(3)  --------->CCA1(2) --ANAC58                     --------------------->WRI1    ------>NtERF2       <---------GLK1(1) --ANAC58        <---------ARR14(2)        <------NtERF2   --------->ETT(2)     --------->GLK1(1) --ANAC46        --------->ARR14(2)  <---------HSFB2a(1)  --------->DEAR3(2)--------->LBD16         < -LBD16 --------->MYB46(3)<-----------GT1<---------DEAR3(1)--------->DEAR3(1)  <---------ARR11(3)   -   gacaacaacaacaacttcgtttccgattttacccttggaatcgtcggagtttatgaatttgccgaccgtcttgatctccgagatttctttagagacgagc  16490600           <---------ZAT2           --------->ZAT2           --------->At4g35610           <---------At4g35610          <---------ARR14(2)          --------->ARR14(2)                                                        --------->ARR11(3)         <------NtERF2                                                   <------ZmHOX2a(2)        --------->LBD16                       --------->ANAC58          <---------ARR11(3)      <---------LBD16                  <---------ANAC58                 --------->ARR11(3)    <------  ------>ZmHOX2a(2)     --------->ANAC58      --------->ANAC58      <------ZmHOX2a(1)<------ZmHOX2a(2) ---------ARR14(2)      --------->ANAC58<-----------HVH21           ========================HOX2a_HOX2a -------->ARR14(2)     <---------LBD16 <---------ANAC58 <---------At4g35610        --------->At4g35610   gggatcgagccggagctgtgtttaacgcgcattctacgagcgcgtgagacgcgattcaagcagacgaagaggaagatcaagagtgagatcaagagtatga  16490700                                                       <---------ANAC46                                                    <-----------RAV1(1)                                               <---------HSFB2a(1)                                               --------->HSFB2a(1)                                          --------->ANAC58                                          --------->ANAC58                                        --------->MYB52(1)                              <---------ETT(1)                                       --------->ARR14(2)                     --------->AtMYB61                                   <-----------------AGL1                     <---------ALFIN1                          <---------TOE2(3)    <------MYB46(1)               --------->MYB46(3)                          <---------TOE1(3)    <------MYB83   <------ZmHOX2a(1)----------->RAV1(1) <-                        ---------->DOF2<---------ARR14(2)--------->ALFIN1  --------->AtMYB61       -- ---YAB1       --------->WRKY38(1) ----------------->AGL1<---------ANAC46 --------->MYB46(3)      <--   aaacagaacaaatcgcgatgactaagtaaaggtttagtccgaaaacggaaggttttgttgtggaggacttgtgagaaccaccaccagagtccgacatcgc  16490800              ----------->GT1                                       --------->ANAC58            ---------->DOF2                                         --------->ANAC58  --------->ANAC55(2)                                               --------->ANAC46  --------->ANAC46                                   <---------ANAC58  <---------ANAC55(2)                                <---------ANAC58 ---------->DOF2 <---------LBD16                                    --------->At4g35610               --------------- -----ZmHOX2a(2)                               <------MYB46(1)--------->KAN4(2)      <------ZmHOX2a(1) --------->HVH21                               <------MYB83  <---------KAN4(1)   <---------MYB52(1) ---------HVH21                               --------->MYB59--------->KAN4(1)  --------->TOE2(3) ---   gatcacggagtagagaaagtcaaaactacttctctcagacggattagtttggtttgctggagattgttccaagaaagagaaacgttaggagcaaacaaac  16490900                                                           *TSS                                <-----                                                           --------->MYB52(1)                  ------                                                          <---------WRKY12                     ------                                                          <---------WRKY38(1)                 <------                <---------YAB1                         <---------At4g35610                    -------              --------->YAB1                --------->AHL20(2)       <------------CBF         -------              <---------ICU4                <---------AHL20(2)   <--------P                   <------     ---------->DOF2   <---------YAB1       --------->AHL20(1) ----------->GT1                <------ --------->ANAC81  <---------WOX13(1)  --------->AHL20(2) ---------->CDC5                    -------- ------->DOF2--------->ICU4   <----------DOF2          --------->At4g35610                   --------   aaaagagaaaagacgatgatgactgatgagagctttaacaaaaaaataaaatgagagagctcaacgggtagaattgtgagacttgagagagtgtttccta  16491000                                         <---------------AtSPL8    <---------ANAC58                  ------>MYB46(1)    <---------ANAC58                  ------>MYB83 <---------TOE2(3)                    --------->MYB52(1) <---------TOE1(3)                   <---------SPL7 ----------AGL15                    <---------MYB46(2) --------->AGL15                    <---------MYB55(2) >ZmHOX2a(1)                        --------->MYB46(3) -----------AGL3                    <---------MYB52(2) -------->AGL15                     --------->DEAR3(1) ---------->AGL3                   --------->ANAC58 -----------AGL2                   --------->ANAC58                   -------->HAHB4          <------ -----------AGL1                   <------NtERF2     <---------TOE2(3)--------->YAB1          <------ --------->AGL1         <---------ANAC55(2)  <-------TEIL            <---------YAB1      <------MYB83 --------->AGL3<---------ZAT6     ------>NtERF2   <---------AHL20(2)<---------TOE2(3)    <------MYB46(1)   tttaaggcatgcgattagtgtttattacgagaatgccaccgaacgagtacatattaatgtatagtatgttaatgatagtctaactaaaatttggttttta  16491100                              ----------->GT1                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                       <------MYB83                           --------->ARR11(3)                --------->ANAC46                           --------->GLK1(2)                 --------->ANAC58                           <---------ARR14(2)                --------->ANAC58                           <---------AGP1                   --------->SPL7                           <---------ARR11(3)             <---------SPL7                           --------->ARR14(2)             --------->TOE1(2)                          <------ZmHOX2a(1)             <---------------AtSPL8                      --------->ICU4                    --------------->AtSPL3                    <---------ICU4                   <---------AHL20(2)                 --------->AHL20(2)                    --------->YAB1                  --------->AHL20(2)    --------->YAB1<---------AHL20(2)      <---------GLK1(2)--------->YAB1            <---------AtLEC2   <------MYB46(1) --------->AHL20(2) ---AHL20(2)       --------->ICU4           --------->ARR14(2)    <---------MYB52(1)<---------AHL20(2) ---YAB1         --------->YAB1             <---------ARR14(2)   <-------GAMYB   ----------->GT1 <---   ttgaaatagaattttgtaagaataatgaggatctgtaatatagctggatttgcattaaatcgtacgccgttggtaatcgaaattagttaaataaatgttt  16491200                                                                            <---------TOE2(3)                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                     --------->AHL20(2)                                                               ------>ZmHOX2a(2)                   >>>>>>>>>>AtTINY2                           ======================HOX2a_HOX2a                   <---------ETT(1)                            ----------->GT1<------ZmHOX2a(1)                   ----------->HVH21                          =======================HOX2a_HOX2a               <---------ANAC58                               <------ZmHOX2a(2)           <------MYB83                                      --------->ARR11(3)           <------MYB46(1)             <--------ATHB1        <---------ARR11(3)       <-----------RAV1(1)  --------->ATHB12      <---------AHL20(2) <---------AHL20(2)      <---------TOE2(3)    <---------YAB1<-----------GT1     --------->ARR14(2)        ----------->GT1    <---------AHL20(2)  --------->ICU4 --------->YAB1        <---------ARR14(2) ----------->GT1 --------GT1   <---------ANAC58       <---------ATHB51 <----------DOF2--------->AHL20(1)       ------   tagcatataatgttggtgcttccgacatgtttattggacaataataccatattttttctttgggatcttaaaaaaattgaggaagaaaatagtaaaatag  16491300                 <---------ICU4                <---------YAB1                --------->ICU4                             <-------TEIL              --------->YAB1                           --------->ARR11(3)           --------->bZIP60(1)                     ---------->DOF2           --------->REM1(1)                   ------>ZmHOX2a(2)           <---------bZIP60(1)               --------->ARR11(3)                 ---------->DOF2     <---------TOE2(2)                    <---------WOX13(1)                 <------ZmHOX2a(2)     --------->MYB59                    --------->ATHB12--------->CCA1(2)   <---------ARR11(3)     <---------TOE2(3)                 <---------YAB1  <---------ARR11(3)   --------->ARR11(3) ----->GT1 <---------TGA2(1)  <----------DOF2<---------ARR11(3)       --------->ANAC46   tcaaacttaggttacatcataatgggccaattctttgagttgtgattgatctccaaagatatacatagatttacacaagatcaaaagaaaaacaattggg  16491400                                      --------->GLK1(2)                                     <---------GLK1(2)                              --------->YAB1                              <--------HAHB4                             <---------YAB1                       <-------TEIL<---------YAB1              <---------CCA1(2)    <---------TOE2(3)                                           <-----        --------->ANAC58   --------->YAB1 <----------DOF2                        <-----------ARR10        --------->ANAC58 <XXXXXXXXXXXXXXXXXXXXMIR172E                            --------->ARR14(2)   cctaaaccccaagcccatatcaacgtccattatcattaagattcctttttttcttgaaatttgaaaatttgaaattcgattcaaatctactctctctgtt  16491500  Previous    Next  AGI:  At4g34500.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G01540.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47634.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 16487759    to: 16490959    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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