Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->TOE1(2)                                            <---------ARR14(2)                 <---------AHL20(2)                <---------YAB1    <---------GLK1(1)     <-----------RAV1(2)    --------->AHL20(2)            <-----------GT1       --------->GLK1(1)   <-----------HVH21    --------->LBD16     <---------YAB1   --------->MYB52(1)    --------->ARR14(2)         <---------ARR14(2)          --   <----------DOF2--------->WOX13(1)       --------->WOX13(1)          --------->ARR14(2)      <-----   attagctttcattgtaacatcattcaacggtttgagaaatccagccaatccagcgaggtcaggcttctgttcaaatccgaataaaatagaaatcaacatc  16487000                                                                                        <----------DOF2                                                                                    <----------------                                                                                   <---------At4g35610                                                                   <---------WOX13(1)--------------->AGL15                                                                  <---------AtLEC2 <---------ZAT2                                                                  <---------ANAC58 --------->At4g35610                                                         --------->TOE2(3)     --------->ANAC46                                                         --------->TOE2(2)     --------->ANAC58  XXXXXXXXXXXXXXXXXXXX>MIR3933           <---------YAB1 ----------->RAV1(2)    --------->ANAC58 ----- -------->DOF2------->TEIL               --------->ICU4-------->P <---------ANAC58 --------->ZAT2   - ----------------WRI1     <---------AtMYB61         <---------MYB52(2)       ---------->DOF2    -----   caaaagcacaatgacgaaccaaaacgaattggtcgattacaccatgattcaaaaactaacctgagtttgcttgatgcgaacaagcagctccttttgggaa  16487100                                                                        --------->MYB46(3)                                                                       ------>MYB46(1)                                                                       ------>MYB83                                                                  <---------ZAT18                                                                --------->At4g35610           ------>ZmHOX2a(2)                                                                <---------At4g35610         <--------                                                            <-----------HVH21               <--------                                                           <---------MYB46(3)               ---------                                                           <---------DEAR3(2)               <--------                                                          <---------DEAR3(1)                ---------                 --------->TOE2(3)      <---------ALFIN1  <---------ANAC46                  ---------           ------>NtERF2               --------->ETT(2)  <------NtERF2 -------->P     --------->GLK1(1)          --------->DEAR3(1) --------->HSFC1(1)        <---------DEAR3(1)   <---------ALFIN1<--------   <---------HSFC1(2)        <---------HSFB2a(2)      --------->At4g35610  ------>MYB46(1)  <--------   --------->HSFC1(2)<-----------HVH21 <-------TEIL   <---------At4g35610--------->AtMYB61  --------- -AG   <---------DEAR3(1)    --------->HSFB2a(2)    ---------->CDC5--------------->AtSPL3  <---------CCA1(2) ---->ANAC58     --------->YAB1 <<<<<<<ZML2  <---------GLK1(2)<---------WRKY12        <---------GLK1(1) --------->DOF2--------->ARR11(3)      <---------WRKY12<---------RAP2.3(2)----------->RAV1(1)<------ZmHOX2a(2) ---->ANAC58   <---------ARR11(3)     --------->TCP16(2)<---------RAP2.3(1)------>MYB83   -----------   gcaaaagcttcggcgactatcttagtcacatctagaacaggtccaccgattttctcagcggcggtcagagccctaccaacacattgagaaatcagatctt  16487200                                                  <------ZmHOX2a(1)                                               <------NtERF2                                               --------->ATERF1(1)                                             <---------DEAR3(1)                                             --------->ALFIN1                                             <---------ANAC46                                            <---------At4g35610                                            <---------ABI4(1)                                            <------NtERF2                                            <---------LBD16                                            --------->At4g35610                                            --------->ATERF1(1)                                           <---------DEAR4(2)                                           <---------ERF1                                           <---------RAP2.3(1)                                           <---------ATERF1(1)                                           <---------ORA47(2)                                           <---------RAP2.6(1)                                           <---------RRTF1(1)                                           ------>NtERF2                                          <---------RAP2.3(2)                                          <---------ATERF1(2)                                          <---------RRTF1(3)                                          <---------DEAR3(1)                                          --------->DEAR3(1)                                          --------->ATERF1(2)                                          <---------RRTF1(2) --------->ANAC58                         <---------RAP2.3(3)                                       < --------->ANAC58                        --------->ATERF1(1)                                   <----- --------->ANAC46                        <---------ABI4(1)           ---------->DOF2           <----- -GLK1(2)             ----------->HVH21 <---------RAP2.3(1)       --------->LBD16              <----- ---ARR10             <---------DEAR3(1)------>NtERF2            <---------LBD16            <-------- >ARR14(3)           --------->SPL7     <---------ATERF1(1)     ------>NtERF2              <-------GAMYB -ARR14(3)         ----------->HVH21    --------->LBD16         <---------LBD16         ------>ZmHOX2a(1) >ARR11(3)         <---------SPL7      <---------RAP2.3(2)      --------->LBD16         ============= >ARR14(2)        ------>ZmHOX2a(2)    <---------LBD16        ---------->CDC5           ============= -ARR11(3)      <---------ARR14(2)    <---------LBD16         <---------LBD16        ================ -ARR14(2)      --------->ARR14(2)  <---------ARR14(2)<---------GLK1(1)              ================ >AGP1  --------->GLK1(2)           --------->ARR14(2)--------->GLK1(1)     <-----------ARR10 <------ >ARR10<---------GLK1(2)  ------>NtERF2<---------RAP2.6(2)   ------>ZmHOX2a(1)       ------>ZmHOX2a(1)   cataagccagaatcgatggatcggacgacgcgatatcgattccggcggcggaggagaaatctcctccgcgggaaagagaaactactcctcctccgttgct  16487300                  --------->ARR14(2)          --------->ANAC58      --------->ANAC46   ------>ZmHOX2a(2)  <------ZmHOX2a(2)      <---------ZAT2 <---------ARR11(3)      --------->ZAT2 <---------ARR14(2)      --------->At4g35610                                             <---------HSFB2a(2) --------->ARR11(3)      <---------At4g35610                                            ============= --------->ARR14(2)   --------->LBD16                                                   ------>ZmHOX2a(2) ---------GLK1(1) <---------ARR14(2)                                                   <------ZmHOX2a(2) ----ANAC58       --------->MYB52(1)                                                   --------->CCA1(2) ----ANAC58    --------->bZIP60(2)                                                     ============== ----ANAC46    --------->ANAC58                                                       --------->ARR11(3) -MYB52(1)--------->ANAC58 <----------DOF2                                            <---------ARR11(3) =========HOX2a_HOX2a--------->ANAC46            ------>ZmHOX2a(1)                    --------->ARR14(2) ========HOX2a_HOX2a<------------AtMYB77     <---------ARR14(2)                       --------->AGP1 =========HOX2a_HOX2a------->GAMYB   <----------DOF2                   ---------->DOF2<---------AGP1 ========HOX2a_HOX2a--------->MYB46(3)       --------->ARR14(2)  <------ZmHOX2a(2)    <---------ARR14(2) ---MYB46(3)   --------->ANAC58--------->ANAC46  =======================HOX2a_HOX2a ----------->ARR10   tgagatcccctcaagcctcgtaaccgcagcttcaaggcgcttaatcaaatcctcttccattttttcgatcaacaaaagctcgagtttagatctggatgaa  16487400                                                                                      <----------DOF2                                                                                    <---------ANAC58                                                                                <-------MYC4                                                                                ------->PIF5                                                                                ------->MYC4                                                                                <-------MYC2                                                                                <-------PIF5                                                                                <-------MYC3                                                                                ------->MYC3                                                                                -------->ABF1                                                                               ======================                                                                               --------->ANAC55(2)                                                                               <---------ANAC55(2)                                                                               --------->TGA1a                                                                               >>>>>>>>>>HY5                                                <---------ICU4                 --------->O2                                               <---------YAB1                  >>>>>>>>>>ABI5                                               --------->ICU4                  >>>>>>>>>>AtMYC2                                             --------->YAB1                    <---------O2               --------->GLK1(2)             <---------ICU4                    ==================bZIP_DOF              --------->ARR14(2)             -------->HAHB4               ----------->HVH21              <---------ARR14(2)            <---------ATHB12              <---------bZIP60(1)              <---------GLK1(2)    --------->ALFIN1                       --------->bZIP60(1)        <------ZmHOX2a(1)        <---------ANAC58                       <---------At4g35610      <---------TOE1(3)          <---------ANAC58                       --------->At4g35610      <---------TOE2(3)*TSS      <---------ANAC46                 --------->GLK1(2) <---------ANAC58  <----------DOF2      <-----------GT1<---------PCF2          <------ZmHOX2a(1)<---------bZIP60(2) ==============HOX2a_HOX2a <---------DAG2   --------->ICU4 <-----------RAV1(2) <---------TGA1a ==============HOX2a_HOX2a <----------DOF2 <---------TOE2(3) --------->At4g35610------->MYC2   atcgatttaaggaatggattctgttttccctttttgcgtggggctaatgatgatggcgaagtcaggagaatgtgtgatgacacgtggcctttcttagata  16487500                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                        <---------ARR14(2)                          ------>ZmHOX2a(2)              <--------P                --------->ARR14(2)                          -----------------           <---------TOE1(2)          <---------DEAR3(2)                           <------ZmHOX2a(2)           <---------TOE2(2)    --------->ARR14(2)        ------->MYC3            <---------ARR14(2)          <-----------RAV1(2)   <---------ARR14(2)        <-------MYC3            --------->ARR14(2)      ------>MYB83              <---------ANAC58        ------->MYC3             <---------ARR14(1)      ------>MYB46(1)      <---------MYB46(3)           <-------MYC3            --------->LBD16   ------------>CBF        <---------ANAC46       --------->ANAC46<---------At4g35610 <-----------GT1--------->MYB52(2)   --------->ETT(1)<---------ALFIN1         <---------LBD16 ======================MYC_MYB  <---------ANAC58  <---------ETT(1)--------->At4g35610   attttaccaatcgcaggttagtggtctggtcgtggattgtcggatccaaattccgacacatgtgtttgagctcgacccaaaccggatccaaaataggttt  16487600                                                                                                    <                                                                                                    <                                                  ---------->DOF2                                 ---                                          --------->YAB1                                         <---                                          --------->AHL20(2)                                ------>MYB46(1)                                         <---------ATHB12                                   ------>MYB83                                        ------>MYB83               --------->ARR14(2)     <---------MYB59                                        ------>MYB46(1)            <---------ARR14(2)  <-----------GT1   --------->LBD16                     --------->WOX13(1)   --------->DEAR3(1)      ------>MYB46(1)<- <---------LBD16                  <---------ARR14(2)     --------->ARR14(2)         ------>MYB83<---- >AGL3   <---------TOE2(3)        --------->ARR14(2)     <---------ARR14(2)    <-----------GT1-------   aagaccggattaagtttttaaacccgaactaaaccgtataccaatcaaatttcaaagcagagccgaacagttcttctctataaaccaaattaccaaattc  16487700        --------->LBD16      <-------TEIL      <---------LBD16   <------MYB83   <------MYB46(1)  --------->MYB59  --------->MYB52(2)  --------->MYB111(1)  <---------AtMYB61  --------->MYB46(2)  ----------->ARR10 --------P                                                                                <---------- ---------MYB52(1)                                                                  --------->AHL20(2) ------>LBD16                                                                       <---------AHL20(2) ------ANAC46                                                               --------->ZAT14 ----------HVH21                                                         <---------ZAT6<---------YAB1 -----LBD16      <---------AHL20(2)       ----------->GT1  --------->ANAC58 <---------ZAT14     ----- -->GLK1(2)      <---------YAB1          ----------->GT1   --------->ANAC58 --------->ZAT18     <----   cggttaggtccgggtcgatattatttctcaggcctaaattgaatgggaaaattcacaagggaagaaatgttcttagagttcactgttttattatacaata  16487800                   --------->ANAC58    <---------AHL20(2)   <---------ARR11(3)   --------->ARR11(3)                                    <-----------GT1   --------->AHL20(1)                           <---------ARR11(3)   <---------AHL20(1)                          <---------CCA1(2) -GT1   <-----------GT1                      <---------CCA1(2)        <-----------GT1 --------->WOX13(1) ---->AHL20(1)     --------->ANAC46       ------>ZmHOX2a(1) <----------DOF2     <---------AtLEC2 -----ARR11(3)     --------->ANAC58      --------->TOE2(3)  <---------DAG2 <----------DOF2 ------>ZmHOX2a(1)   tatgatatatttacaaattacaagcgataaatctgaatttcatcctcatatatctaatttcacttttccaattttctcttttgcatatcaatcctctcaa  16487900  Previous    Next  AGI:  At4g34490.1    Description:  ATCAP1 (CYCLASE ASSOCIATED PROTEIN 1). similar to adenylyl cyclase-associated protein [Gossypium arboreum] (GB:ABU97498.1); similar to adenylyl cyclase associated protein [Gossypium hirsutum] (GB:BAA36585.1); contains InterPro domain Adenylate cyclase-associated CAP; (InterPro:IPR001837); contains InterPro domain Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal (InterPro:IPR016098); contains InterPro domain CARP motif; (InterPro:IPR006599); contains InterPro domain Adenylate cyclase-associated CAP, C-terminal; (InterPro:IPR013912); contains InterPro domain Adenylate cyclase-associated CAP, N-terminal; (InterPro:IPR0 Range:  from: 16484534    to: 16487423    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g34500.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G01540.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47634.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 16487759    to: 16490959    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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