Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <-------MYC3                                                           ------->MYC3                                                           ------->MYC4                                                           <-------MYC4                                                           <-------MYC2                                                           ------->MYC2                                                           <-------PIF5                                                           ------->PIF5                                                           ------->PIF4                                                           <-------PIF4                                                          --------->ANAC55(2)                                                          --------->ANAC58                                                          --------->ANAC58                                                 <---------ICU4         --------->ANAC58                                                <---------YAB1          --------->ANAC58                                                --------->ICU4          --------->ANAC46     --------                                              --------->YAB1          ------>ZmHOX2a(1)     ------>MYB46(1)      <---------YAB1                         <---------ATHB12        --------->TOE2(3)      ------>MYB83    <---------ICU4                     <-------MYC3       <---------TGA1a                 <---------MYB59    --------->YAB1                  <---------ANAC58      --------->ANAC46             <-----------GT1 >ZmHOX2a(2)             <---------YAB1------->MYC3       <---------ANAC55(2)  --------->YAB1<------- --ARR11(3)            --------->YAB1 ----------->GT1     --------->TGA1a   --------->WOX13(1) ->ARR11(3)  --------->REM1(2)      <---------ANAC58    <------------OsbHLH66 <---------ATHB12     <-   ctctattcatgactgtgaaggccattgatgatcaaatagcatgtgaaatcataattttgcacgtgatttatcctaagccaatcagtaagttacctagcta  16451500                                                                           --------->YAB1                                                                          --------->ZAT6                                                                        -------->HAHB4                                                                        --------->YAB1                                                                       <---------YAB1                                                                     --------->YAB1                                                                    <---------YAB1     <-----------GT1                                                                  <---------ICU4  --------->AHL20(2)                       <---------AHL20(2)                         --------->YAB1  <---------AHL20(2)                       --------->AHL20(2)                        --------->ICU4   --------->AHL20(1)                     --------->AHL20(2)                          <---------ATHB12<---------AHL20(2)                 --------->AHL20(2)                            --------->WOX13(1)--------->AHL20(2) ->STY1(2)  ------->MYC3                                     <---------ZAT18  <---------ICU4    ----- --STY1(2)  <-------MYC3                  ---------->DOF2    --------->ZAT18 --------->ICU4    ------ --------ICU4    <---------AHL20(2) ----------->GT1         --------->ANAC46 --------------->AGL15  -   cttattccattaaacgtgtttaaatttatatgtaaactgtgttaaaaaggaacaattgataagcgcaatcataataatactaattaaattaacaaaacag  16451600                                      <---------YAB1                                      <---------WOX13(1)                            --------->LBD16                                    --------->ATHB12             <-----------HVH21--------->ANAC46                                    ----------->GT1 <---------YAB1            <-----------GT1       <---------ARR11(3)          <---------YAB1   --------->ICU4           <-----------GT1       --------->ARR11(3)   --------->YAB1--------->ZAT6 ---------->DOF2    --------->AHL20(2) ---->At5g28300    <-----------HVH21-------->HAHB4  ----------->GT1         <---------AHL20(2)   ==== ----->GT1         <-----------TGA1<---------ATHB12<---------TOE2(3) --------->bZIP60(1)         ---- --------->DOF2   --------->YAB1   --------->ICU4<---------AHL20(2)  <---------bZIP60(1)     <-------   taaaaagaagttcttgaaaatcgtcatgtatgatgaaatgattaatactaaataatgtttaaagaaatgtcatgtcatttaaaccccccaaaaaaaaaac  16451700                                             ------->MYC4                                             ------->MYC3                                             ------->PIF5                                             <-------PIF4                                             <-------MYC4                                             <-------MYC3                                             ------->MYC2                                             <-------MYC2                                             ------->PIF4                                            --------->ANAC55(2)                                            <---------O2                                            <---------ANAC55(2)   <-----------HVH21                        --------->O2   <-----------TGA1                         <---------TGA1a                   --------->LBD16  <---------ANAC55(2)                    ------->GAMYB                       <---------ANAC58  ===============================================MYC_MYB                     <---------ANAC55(2)  --------->bZIP60(2)                    =============MYC_MYB                <---------TGA1a  <---------TGA2(1)                      ==============================================MYC_MYB  --------->ANAC58                      --------->ANAC58                     <---------ANAC46  --------->TGA2(1)                   ---------->DOF2                        --------->TGA1a  --------->ANAC46                    ================bZIP_DOF               <---------O2  --------->TGA1a                     --------->MYB52(1)                     --------->O2  --------->O2                        =================================================bZIP_DOF  <---------O2                   <------ZmHOX2a(1)                           <---------ANAC58  <---------TGA1a             <---------LBD16<-------PIF5                    ==================bZIP_DOF  --------->bZIP60(1)         --------->HSFB2a(2)                        <-----------HVH21    -------  ===============================================bZIP_DOF               --------->ANAC55(2)  --------  --------->ANAC58            <---------HSFB2a(2)                       <---------ANAC55(2) ---------  <---------bZIP60(1)   --------->AHL20(1)  ===================================================bZIP_DOF <-----------STF1       --------->ARR11(3)  --------->TGA1a             --------->ANAC46    <-------- ===========bZIP_DOF    <---------AHL20(1) ------->TEIL              --------->ARR14(2)     <-------- ------>DOF2            <---------ARR11(3)<------------OsbHLH66      <---------ARR14(2)   --------->ALFIN1 ---ID1              --------->AHL20(2) --------->ANAC58        <------ZmHOX2a(2)   ---------->DOF2 <   aaagacgtcacattcaaatgtcaaaaaatattcgaggaaataacgcacgtgtttccaaaaacacagatcagaatacgtcccgtgtgaaaagagtgtgtgc  16451800                 <---------ARR11(3)                 <---------ARR14(2)               ----------->ARR10       --------->bZIP60(2)       --------->ANAC46       --------->ANAC58       --------->ANAC58  --------->MYB59--------->ARR14(2)        --------->AHL20(2)  --------->MYB46(2)--------->ANAC55(2)    ----------->TBP ---------------->TaNAC69(2)         ------>NtERF2 ->ZAT18    <---------O2         --------->ANAC58 >ALFIN1    <---------ANAC46     --------->ANAC58 -ANAC58    --------->O2         --------->ANAC46                           XXXXXXXXXXXXXXXXXXX>MIR158B -ANAC58   ------>NtERF2        <---------LBD16         <----------DOF2     XXXXXXXXXXXXXXXXXXX>MIR158A ---------MYB52(1)  <---------ANAC55(2)    <---------AHL20(2)   <----------DOF2 *TSS              <--   cagttaggcacgccacgtagatacttgacaaaaacacggagccatataaatagagcttctttctcactttcagtttcccaaacacaaacaaaactcatat  16451900                       ------>MYB83                     --------->AtMYB61                  --------->ANAC46--------->ANAC58            <-------TEIL ------->GAMYB          ------->PIF5----------->RAV1(1)               --------->ARR14(2)          <-------PIF5--------->MYB52(1)                <---------ARR14(2)         <---------At4g35610      --------->ANAC58  <---------LBD16                                 <         <---------ZAT2------>MYB46(1)           ------>MYB46(1)                           --------->GLK1(1)       ===========================RAV            ------>MYB83                             --------->ARR14(2)       <-----------RAV1(2) <---------GLK1(2)   <---------MYB59                           <---------ANAC46 ---------GT1 <----------DOF2 ------------------------>ANAC81                          <---------ANAC46   tttcaatctccaggtgctttacaccaacagagtcgcaagaaaacaaaaaccaaactcggatttagtttgacagaagaaggaatcgagagtcgggtatgca  16452000                            --------->At4g35610                            --------->ZAT2  --------->LBD16                            <---------At4g35610                            <---------ZAT2 --------->ANAC46                            <---------GLK1(1)                  <---------ARR14(2)    ------>MYB83                  --------->ARR14(2)    -------->P                           <---------ARR11(3)            <---------ARR14(2)        --------->MYB46(3)                     --------->ARR11(3)            --------->ARR14(2)        <---------ALFIN1               --------->LBD16          ------->GAMYB     --------->GLK1(1)                      --------->At4g35610       ----------->RAV1(1)<------NtERF2 ------>MYB46(1)            <---------LBD16                 ==      --------->MYB46(3)<---------DEAR3(1)<---------LBD16      <-----------HVH21<----------DOF2    <-   ------>ZmHOX2a(1)  <-----------HVH21<---------ALFIN1     --------->At4g35610 ===================== ---------YAB1 <---------MYB59  <---------ALFIN1   ---------->DOF2 <---------At4g35610<---------MYB52(1)   ttatcctaacaacagaaccgaattcgtcggagctccagccccaacccggtatcaaaaggagcagttgtcaccggagcaagagctttcagttattgtctct  16452100                                        <-----------HVH21                                       ----------->HVH21                                     --------->O2                  --------->LBD16    --------->DEAR3(1)                <---------LBD16      <---------ANAC58                <-----------RAV1(2)  <---------O2            <---------ARR11(3)       <---------ANAC58         <-------MYC3                <---------ANAC46         ------->MYC2               <------NtERF2         ------->MYC3               --------->ATERF1(1)         <-------MYC2              ------>NtERF2        --------->TGA1a            <---------RAP2.3(1)        <---------O2               <---------ATERF1(1)        <---------TGA1a           --------->DEAR3(1)        --------->O2              <---------DEAR3(1)                         --------->LBD16        --------->ANAC58         --------->RAP2.3(1)                --------->YAB1        --------->ANAC55(1)      --------->ATERF1(1)             ----------->GT1        <---------ANAC55(2)      <---------ABI4(2)             <---------ZAT14        --------->ANAC46        <---------DEAR4(2)             --------->ZAT14        --------->ANAC58        <---------ATERF1(1)          --------->At4g35610            <------MYB46(1)        --------->ANAC55(2)  --------->MYB52(1)              <---------ZAT14<---------LBD16 <------MYB83      <---------ALFIN1    --------->ANAC58                 <---------bZIP60(1)            <---------MYB52(1) =================bZIP_DOF--------->ANAC58 >>>>>>>GRF7     --------->bZIP60(1)           <-------GAMYB ---------DOF2------>ZmHOX2a(2) <---------RAP2.3(1)     ----------->HVH21  <---------LBD16<--------P =================bZIP_DOF--------->ANAC46<-----------RAV1(2)<---------At4g35610        <---------MYB46(3)   gctttgcaacacgtgatctcaggggaaaacgaaacggcgccgtgtcagggtttttccagtgacagcacagtgataagcgcgggaatgcctcggttggatt  16452200                                                        >>>>>>>>>E2Fc                                                        >>>>>>>>>E2Fd                                                      --------->ANAC58                                                      --------->ANAC46                                                      --------->ANAC58                                                    <---------ANAC58                                                    <---------ANAC58                                               <----------DOF2                                      <----------DOF2<---------LBD16                                    --------->At4g35610 <------NtERF2      <-----------HVH21    <------ZmHOX2a(1)   <---------DAG2   --------->O2       ------>ZmHOX2a(2)--------->At5g28300                      --------->YAB1   <---------O2    <------ZmHOX2a(1)<---------At4g35610------>NtERF2     ---------->DOF2   cagacacttgtcaagtctgtaggatcgaaggatgtctcggctgtaactactttttcgcgccaaatcagagaattgaaaagaatcatcaacaagaagaaga  16452300                                                              <------NtERF2                                                              ----------->GT1                                                            <---------ANAC46                                              ---------->DOF2--------->LBD16                                         <---------ANAC46   <---------ANAC58                                        <------NtERF2       <---------ANAC58                                      --------->ALFIN1     <------NtERF2                                     --------->LBD16       <---------LBD16                                    --------->TGA1a        --------->ATERF1(1)                                    <---------ANAC58     <---------DEAR3(1)                                    <---------TGA1a      --------->ALFIN1                                    =====================bZIP_DOF  ------------------------>ANAC81                                    <---------O2       <------MYB46(1)                                    <---------ANAC58   <------MYB83--------->GLK1(2)          -------             --------->MYB52(1)     --------->O2      <---------AtMYB61                 --------->YAB1   --------------->AGL15     --------->At4g35610      --------->DAG2          <------ZmHOX2a(1)   <---------------AGL15     <---------At4g35610 --------->At4g35610    <------ZmHOX2a(1)     <------   gattactagtagtagtaacagaagaagagagagctctcccgtggcgaagaaagcggaaggtggcgggaaaatcaggaagaggaagaacaagaagaatggt  16452400  Previous    Next  AGI:  At4g34410.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF109 (ERF109) [Arabidopsis Thaliana] (GB:Q9SZ06); similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G50080.1); similar to wound-responsive AP2 like factor 2 [Nicotiana tabacum] (GB:BAF48804.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 16451880    to: 16453264    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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