Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->At4g35610             <---------ZAT2                                             <---------ANAC58             <---------At4g35610                                        <---------ANAC46             --------->ZAT2                                             <---------ANAC58           --------->ZAT18                                         --------->TGA1a           <---------ZAT18                   <---------TOE2(3)     --------->O2        <---------TGA1a                --------->ZAT18             <---------TGA1a        --------->TGA1a                <---------ZAT18       --------->GLK1(2)        <---------O2                   <---------ZAT14      --------->ARR14(2)      --------->HSFC1(2)        <---------ANAC55(2)     <---------ZAT18             <---------GLK1(2)       --------->HSFB2a(1)        --------->O2            <---------ETT(2)--------->CCA1(2)  <---------O2     <---------HSFC1(2)    <-----------HVH21----------->GT1   --------->ZAT14    ----------->ARR10         <---------HSFB2a(1)   tttgtttgtcaagtgagcttggagagtgatactgtggacaatgcactgaggtatgcgagagagattctcaagtggcatgttgaagaaacttccatgttcc  16444800                                        <---------ARR11(3)                                   ------>ZmHOX2a(1)                                ---------->ID1                           --------->ZAT2                      <----------DOF2  --------->ANAC55(2)                           <---------ZAT2                  <----------DOF2      <---------ANAC55(2)                           --------->At4g35610     ------>ZmHOX2a(1)          --------->AHL20(2)                           <---------At4g35610    --------->TOE2(3)<----------DOF2   aagagatgtctactactagcatagaggccagctcgtcctcttgatattttttcctaaaattctttctttctttgtggaaattacataagtttgtttctct  16444900                                                --------->ATHB12                                          <-------TEIL                                             --                                      <-------TEIL<---------WOX13(1)                              <--              ---------->ID1         --------->CCA1(2)         ----------->GT1        --------->DAG2             <-------GAMYB          <---------ARR14(2)      <---------LBD16          ---------->DOF2-            --------->MYB52(2)      --------->ARR14(2)     <---------LBD16----------->GT1        <---            <---------MYB46(3)      <---------ARR11(3)     <-----------RAV1(2)    --------->YAB1<----       ------->TEIL          <---------ZAT6    <---------YAB1--------->LBD16----------->GT1    <-----  <---------ANAC46           <---------ANAC46--------->ANAC55(2)     --------->AHL20(2)----------->GT1   ctctgtgtgtatgtttgttgtatatgtagtagtgtgaagatacattcatgtgattgatttttcaggggaaaaaaaatagagaaataataaagtgaatttt  16445000                                                                     <-------TEIL                                <---------TOE2(3)              <-----------GT1        ------->GAMYB           <---------TOE1(3)         <---------AHL20(2) ------->LBD16             <---------MYB46(3)             --------->AHL20(2)                  ------- -------LBD16             <---------MYB52(1)              <---------AHL20(1)            ----------->GT1 -------->LBD16          <-------GAMYB                    --------->AHL20(1)      <------ZmHOX2a(2) ------LBD16             --------->At5g28300             <---------ATHB12        --------->ARR11(3) -------GT1     <-----------------AG           --------->LBD16 --------->MYB52(1)<---------ARR11(3) ------GT1     <---------AHL20(2)            <---------LBD16 <---------AHL20(2) --------->GLK1(1) ---   cccggtttaacagacatttacttatacggttattgaggttgaactggaccggagtagcaataaattatcggttcagtttgggagatcaaaccgtttaaaa  16445100                                         <---------------AtSPL3                  --------->ANAC58       --------------->AtSPL8                                   ---                  --------->ANAC58       <---------------AtSPL8                                   ---   --------->AHL20(2)                   <------------CBF                                          ---   <---------AHL20(2)           --------->ARR14(2)                                                <--   --------->AHL20(1)           <---------ARR14(2) <----------DOF2                                ---  --------->AHL20(2)    --------->ARR14(2)   ------->TEIL                  --------->ATHB12       ---  <---------AHL20(2)    <---------ARR14(2)  <-----------GT1             --------->TOE2(3)    <------- --->DOF2         --------->AtLEC2     <------ZmHOX2a(1)              <---------TOE2(3)      <------- ------>AHL20(2)  --------->ANAC46   <---------TOE2(3)           --------->TOE2(3)       <-----------HVH21   gaaaataatttgaaatggccacgcagaatacgagggtctgaggattgtacctcctttctctgcaaaaacttaaacgttgatttgactcaagcgtcaaggt  16445200 ------------>AtSPL3 ------------>AtSPL8                      --------->ZAT14 ------>DAG2                             <----------DOF2                      <-----------HVH21 -------------AtSPL8                  <-----------GT1                  <----------DOF2 -------->ARR10                      ---------->ID1                   <------------------------ANAC81 ------>MYB59                    <----------DOF2                 <----------DOF2 --TOE1(3)                       <---------DAG2         <------------------------ANAC81 --TOE2(3)  *TSS            <----------DOF2<-----------GT1 <----------DOF2   <----------DOF2   aaggtactctctcttcatacaacattttagctttactttttctctttactcttctctctctctttctctttctctttctctttcactcgttctctctcac  16445300                                                       <---------At4g35610                                                       --------->At4g35610                                                 --------->GLK1(1)                                                 <---------GLK1(1)                                               --------->YAB1                                               <---------ICU4                                               <--------ATHB1     <-------MYC3                                               --------->ATHB12   ------->MYC3                 --------->CCA1(2)            <---------ATHB12   --------->ANAC46               <----                 <------ZmHOX2a(2)            --------->ICU4     --------->O2                   -----                <---------ARR14(2)       --------->ANAC58   --------->ANAC46                    <----                --------->ARR14(2)       --------->ANAC58<---------ZAT18          <---------ANAC58                --------->AGP1         <---------ANAC58--------->ZAT2   <---------ZAT14         -----      <---------REM1(2)                <---------ANAC58<---------ZAT2   --------->ZAT14     <--------      --------->ZAT14              XXXXXXXXXXXXXXXXXXX>MIR775  <---------ALFIN1   <---------ANAC58   tcactctcttcacacacagatccaagatggcctcttcaatggctagcaatgatttccagctccctccacgtttcttcactgttttcgtctcccatttcag  16445400     <-------TEIL                                                                 --------->ARR14(2) -----At4g35610                                                                   <---------ARR14(2) ---->At4g35610<---------GLK1(2)              <-----------GT1     --------->GLK1(2)--------->GLK1(2) -----ZAT2     <---------ARR11(3)       <---------TOE1(3)        <---------GLK1(2)<---------GLK1(2) ---->ZAT2     --------->ARR11(3)       <---------TOE2(3)    --------->MYB52(1) ----------->ARR10 ---HVH21    ----------->ARR10      <----------DOF2       --------->At4g35610  <--------P         <--   ctcagagttcatggtaagattttctctcgaggtttcttctttcaggtttatctgttcatgagcaaacgattcttgaactgggtagattctcttagcctag  16445500                                                                               <----------DOF2                                                                               <---------DAG2                                                                            <-----------GT1                                                                        <---------GLK1(2)                                                                        --------->ARR11(3)                                                                        <---------ARR11(3)                                                                 ------>ZmHOX2a(1)                             <---------YAB1                <---------At4g35610<---------ANAC58 -------MYB46(3) ----------->HVH21<---------MYB52(2)       --------->At4g35610<---------ANAC58   tggtttctttgaactatgtctgatggtttttatgaaacaaacactgtgtttatctgcatttagcttcctctatagattttgctttttctgtttctagggt  16445600                                                                                                 <---                                                 <----------DOF2                                 <---                <---------MYB52(1)            <-----------GT1                                   -----                <----------DOF2              <-----------GT1                                <--------            -------->P    <---------DAG2    <---------AHL20(2)         <---------AHL20(2) <---------GLK1(1)            ------>MYB83  <----------DOF2 --------->CCA1(2)     --------->At4g35610      --------->ARR14(2)            ------>MYB46(1)              <---------ARR11(3)     <---------At4g35610--------->ZAT6<---           ------>ZmHOX2a(1)             --------->ARR11(3) ------->TEIL     ------->TEIL<---------ARR14(2)   tttgctcttattcctaccctttggtttcctttttctgactaaagatttaaactttctgtatgaatcagcttaatttatggacttaacactggatatgttt  16445700  Previous    Next  AGI:  At4g34390.1    Description:  XLG2 (EXTRA-LARGE GTP-BINDING PROTEIN 2); signal transducer. similar to XLG1 (EXTRA-LARGE G-PROTEIN 1), signal transducer [Arabidopsis thaliana] (TAIR:AT2G23460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40667.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66844.1); contains InterPro domain Guanine nucleotide binding protein (G-protein), alpha subunit; (InterPro:IPR001019); contains InterPro domain G protein alpha subunit, helical insertion; (InterPro:IPR011025); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 16441183    to: 16445009    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g34400.1    Description:  DNA binding / transcription factor. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT3G06160.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82365.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 16445212    to: 16447777    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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