Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------MYB52(1)                                                                             <---------YAB1                                                                            --------->AHL20(1)                                                                            <---------AHL20(1)                                                                            --------->AHL20(2)                                                                           <---------ICU4                                                                           --------->YAB1                                       <---------ANAC46                   <---------YAB1    <---------ICU4                  --------->ALFIN1                   --------->AHL20(2)    --------->YAB1         <---------ICU4                              <---------AHL20(2)   ---------   <---------ATHB12   <---------MYB59----------->GT1     <---------ANAC55(2)<---------AHL20(2)   gtggaatcatgcctaaacaatttgcctaatcttttcaagtggtgtatagtcttcttgatatgtaagtatatgtttaattataattcgttatcaagaatat  16438100                              ----------->HVH21                             --------->LBD16                            <---------ANAC58                            <---------ANAC58                            <---------ANAC46                           <---------LBD16                        <---------ANAC58                                                   ------>MYB83                        <---------ANAC58                                                   ------>MYB46(1)                     <---------ZAT18                                                     --------->AtMYB61                    <---------RAP2.6(2)   --------->MYB46(3)                             <---------MYB59                  <---------ANAC46      ----------->RAV1(1)                   <-----------GT1               --------->ALFIN1    --------->ANAC58                          <-----------GT1   ----------->GT1<---------bZIP60(2)<------ZmHOX2a(1)    <---------------AtSPL8      <-----------GT1 >YAB1         <-----------RAV1(1) --------->ANAC58       --------------->AtSPL8 <----------DOF2    -   ttgtctggatatatcaagtgttgtggccttgcgggacaaggacaacaaatgctcgacaatattgtacatatataagtatttatctttttaaccaaaccaa  16438200                                                                      <---------ANAC58                                                                      <---------ANAC46                                                                  <---------ANAC58                                                              --------->RAP2.6(3)                                                            <----------DOF2                                                           <---------DAG2                          <-                                                         ------->TEIL <---------ANAC55(1) ------->TEIL                                                     --------------->AtSPL3<---------MYB59--------->ARR14(2)     ----------->GT1                              --------->CCA1(2)   <---------ANAC58    <---------ARR14(2) -------->AHL20(2)  ---------->DOF2           <------ZmHOX2a(1)   <---------ANAC58       <---------CCA1(2)   aaaaaaatggtattttaggcagtaaagctatgtgaaatgagttatggaggagatttaagtacctttcggcttgcgtgcctaatattccaatgtatctgaa  16438300                                                            --------->LBD16                                                           --------->ANAC46                                                           --------->ANAC58             ---------->DOF2                               --------->ANAC58      ------->TEIL <---------HSFB2a(1)                    <---------LBD16    <-------TEIL <------ZmHOX2a(1)                      --------->ZAT18 --------->At4g35610                               ---------->DOF2      --------->TOE1(2)           - <---------At4g35610    <---------YAB1       <-------TEIL--------->MYB52(1)     <---------AtLEC2<---- ----------RAV1(2) --------->HSFB2a(1)   <---------------AtSPL8---------->DOF2 <-------TEIL   <------   ctcagatgcattttacaaaggacgttctaattcaatgtaatagagagtacatgtaaagcccacggaaaagaaaacattcgatgcatggatatagtttagg  16438400                               ------->PIF5                               <-------MYC4                               <-------PIF5                               ------->MYC4                               ------->MYC3                               <-------MYC2                               ------->MYC2                               <-------MYC3                              ===================================================bZIP_DOF                              --------->O2                              <---------O2                              --------->TGA1a                           --------->MYB46(3)                          -------->P          <---------HSFB2a(1) <---------ANAC46          <---------HSFC1(2)------->GAMYB          --------->HSFB2a(1) <---------ANAC55(2)                                 <---------ANAC58          --------->HSFC1(2)<---------ALFIN1                                      <---------ANAC55(1)          --------->At4g35610 <---------TGA1a                                     <---------ANAC46   --------->YAB1         ==============MYC_MYB                     <---------ATHB12  <---------YAB1         ===============MYC_MYB                    ------>MYB83   <---------ANAC58  <---------ATHB12       ------->GAMYB            --------->ANAC55(2)        <---------CCA1(1) -------->YAB1          --------->MYB46(3)        <---------ANAC55(2) <----------DOF2       <-------- --ZmHOX2a(1)         <-----------GT1         <-----------HVH21    ------>MYB46(1)<---------ANAC55(2) ---TOE2(3)     ------>ZmHOX2a(1)      <---------ALFIN1         ------------>CBF  --------->ANAC55(2)   attaatcatagaagcttcctctattaacaaccacgtgtgaagcacccctatcacatatcacaaatgaccaatcttttggatatttcgtgtctgtatatat  16438500                             ------->GAMYB                            *TSS                           -------->P                       --------->ANAC58               <------ZmHOX2a(2)                       --------->WRKY38(1)               ====================================HOX2a_HOX2a               ------------>CBF                        --------->WRKY12                   --------->ARR14(2)              <---------ARR11(3)                      <---------MYB52(1)         ---------->DOF2              --------->ARR11(3)                     --------->At4g35610       <---------AHL20(2) ---      <-----------TBP  --------->ANAC46             <---------MYB46(3)         --------->AHL20(2) <-- ---TBP --------->YAB1 --------->ANAC58     ------>ZmHOX2a(1)           ----------->GT1   <---------ICU4   aagtttgcatttataagatcaattctcgcaaccccataaacaattcctcaagagccgttgacaaaccaaaaaacttgttaattaaaagtcaatatttgct  16438600                      --------->ARR11(3)                --------->LBD16               ----------->GT1                          ------->GAMYB               <---------ANAC55(2)                     --------->MYB46(3)               --------->ANAC55(2)                    ------>MYB46(1)                           -----               <---------ANAC46                       ------>MYB83                        --------->TOE2(3)              <---------LBD16                         --------->ANAC58                  <---------ARR11(3)            <-----------GT1    ---------->DOF2        -------->P         --------->ANAC46 --------->YAB1 ------>HSFB2a(2)     <---------ARR11(3)              --------->ANAC58 --------->ANAC46 --------->ARR11(3) -------HSFB2a(2)    --------->RVE1(1)  <-----------HVH21     <----------ID1     ------>ZmHOX2a(1)   ctagaccctccaattttccgtaaaaatctccataaaagtctctgtccctccttgccaaccaaaaactacaaacacacatcatccttcgactatcttattc  16438700                ---------->DOF2           <---------------AGL15           --------->MYB46(3)           --------------->AGL15                                  <---------ICU4          --------->ANAC58                                       <---------YAB1          --------->ANAC58                                       --------->ICU4          --------->ANAC46                                     --------->YAB1          ------>MYB83                                         <--------HAHB4          ----------------->AGL2                               <---------ICU4        <---------ALFIN1                                      <---------YAB1        --------->AtMYB61                               <---------ARR11(3)        --------->DEAR3(1)                  --------->DAG2   <-----------GT1                      ---       --------->MYB46(3)        --------->YAB1         --------->ARR11(3)                        ---     --------->YAB1  <---------GLK1(1)    ---------->DOF2  <---------AHL20(2)      <---------AHL20(2) ---->YAB1------>MYB46(1)       <---------ATHB12       <---------RVE1(1)     --------->YAB1       ---   atagctatcaccacccaaaaaagaaatcaccctaatcaaaaaaaaaaaggcaaggagagattttatcattattctattttcatattttttgaaaaaactc  16438800                                                      <---------SPL7                                                     <------MYB83                                                     <---------MYB46(3)                                                     <------MYB46(1)             <---------ARR14(2)                      --------->CCA1(2)             --------->ALFIN1        --------->MYB52(1)             <---------YAB1                --------->ANAC58            ------>ZmHOX2a(2)        <----------DOF2      ---------->DOF2  --------->MYB52(1)     --------->ARR11(3) ------>ANAC46       --------->ARR11(1)    --------->ANAC58      <-------GAMYB   --------->ARR14(2) ------>ANAC58       <---------ARR11(3) <------ZmHOX2a(1)       <---------MYB46(3)<------ZmHOX2a(2)<- ------>ANAC58   ---------->DOF2  --------->CCA1(2) <---------AtMYB61<---------ARR11(3)  <-----------GT1   aagcaattgacttttgtgataaagatttgaagaaagagatgaggaacgaaacgggtggtaccatggtcgttgatctccaaaccgatccatataacaacat  16438900                                                                   --------->HSFB2a(2)                                                                   <---------HSFB2a(2)                                                          <------MYB46(1)                                                          ----------->GT1                                                          <------MYB83                                                         --------->MYB59                            -                 <---------At4g35610               <---------------AGL15                           --                 --------->ZAT2                    --------------->AGL15                          <--                 --------->At4g35610              ----------------->AGL2                 <----------TaMYB80                 <---------ZAT2                   <-----------------AGL3                --------->ARR11(3)           --------->GLK1(2)       <---------PCF2 <-----------------AGL1                <---------ARR11(3)      <------NtERF2      --------->AtMYB61        <-----------------AGL2         --------->ANAC46 ---    --------->RAP2.6(2)  --------->TOE1(3)  --------->TOE2(2)   --------->ARR11(3)      --------->ARR14(2) --------At5g28300       --------->TOE2(3)  --------->TOE1(2)   <---------ARR11(3)    ----------->ARR10   tcacagtcgccataatctgagctacgaccttagcgagggtcccaaacctaggcctaaatttggtaatatctcgaaaactgaccacgacgagatattccct  16439000  Previous    Next  AGI:  At4g34380.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G18950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47693.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 16438528    to: 16440645    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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