Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->CCA1(2)                  --------->AHL20(2)                    <---------ARR11(3)                            --------->AHL20(1)                    <---------GLK1(2)    <---------YAB1           --------->AHL20(2)    <---------ARR14(2)          --------->ARR11(3)               --------->YAB1    --------->ARR11(1)          <---------ARR11(3)          ----------->GT1    --------->ARR11(3)          --------->ARR11(1)    <---------AHL20(2)                          <-- ------AHL20(2)     --------->ARR11(3)<---------YAB1 --------->AHL20(2)                           --- >GT1--------->CCA1(2)      ---------->DOF2          <---------AHL20(2)  ----------->GT1 <----------DOF2   ttatgagatatggattgttttagatttttaaaaagatatgactattaatatcaaattaaatattgaaaaataatatggaaaatatcaatagctttgaagt  16424300                         --------->ATHB51             <---------ARR11(3)             --------->GLK1(2)             --------->ARR11(3)            --------->RVE1(1)     <-----------GT1     --------->TOE1(3)  <---------YAB1                                 <---------AHL20(1)     --------->YAB1   -------->ATHB1                                   --------->AHL20(1)     --------->TOE2(3)--------->YAB1                                <---------AHL20(2)    <---------YAB1    <---------ICU4                                --------->AHL20(2)   <---------ARR11(3) --------->ATHB51                              --------->YAB1   --------->ARR11(3) <--------HAHB4                             --------->YAB1                 <---- -------AHL20(2)     <---------YAB1                              <---------ICU4            <---------At4g35610 ------>AHL20(2)     --------->ICU4                      ---------->DOF2         <---------ANAC46   tttattatcttaaaaaatctagaattattattgtttttactcttatatttatgtatacataaatcactaattatatattagttatgtggatgcagattac  16424400                                                                                                   --                                                                      <---------ANAC58             --                                                                      <---------ANAC58            ---                              --------->ZAT18                --------->ARR14(2)                 <----          ---------->DOF2   --------------->AtSPL8           --------->GLK1(2)                -------     ----------->GT1   ----------->TBP                       <---------ARR14(2)             --------- -----ANAC55(2)   --------->ZAT6           <-----------GT1------------>CBF   ------>ZmHOX2a(1)------>ZmHOX2a(1)   atgagaatagagaaaagctaactctatatatgtgtacaagttttttttctctctgtctctcccaatctgttttcttgtcctgtgttatcgcctctcctgg  16424500   ----------->HVH21                                         <---------TOE2(3) --------->ANAC46                                            <---------TOE1(3) ------->ANAC58                                         --------->ATHB12 ------->ANAC58                                        <---------AHL20(2) ------>SPL7                                          <---------WOX13(1) -----SPL7           ---------->ID1                 ------>MYB46(1)                      --------->TOE2(3) -->LBD16        <----------DOF2                    ------>MYB83                         <----------DOF2 -->RAV1(2)    <---------YAB1  ------>ZmHOX2a(2)  <---------MYB59                 <---------GLK1(2)   tacgcccgaccaagtttatctttgtctcactgatcgtttctctcagtctcgacctaattgattaaggttttgttttagtctatagattcttctttaatct  16424600                                --------->YAB1                               <---------YAB1                                                     ---                             --------->YAB1                                                       ---            <---------YAB1  <---------YAB1                                                        ---      --------->GLK1(1)   <--------HAHB4                    <------------CBF              --------->GLK1(2)  --------->ANAC46        <---------ICU4                   --------->ATHB12              <---------GLK1(2)  --------->ANAC58       --------->ICU4               <---------ATHB12     <---------AHL20(2)    <---  --------->ANAC58    <-------TEIL                ------------>CBF  <-----------GT1   --------->ANAC46   gtaaacgcatttctatgtttgaaatgcattattatcataagaagtacttgagttcaatctttcattggtttatctgttttattcatatacagaatcgaac  16424700                                                                                 <---------SPL7                                                                                 --------->TOE1(2)                                                                                 --------->TOE2(2)                                                                                ------>ZmHOX2a(2)                                                                               --------------->AtSPL3                                                                     ------->GAMYB --------->SPL7                                                                    --------->ANAC46                                                               --------->ANAC46<------ZmHOX2a(2)       <-------GAMYB                                     ==============================HOX2a_HOX2a  --------->GLK1(1)                                      <------ZmHOX2a(1)    --------->ARR11(3)  <---------GLK1(1)                                      =============================HOX2a_HOX2a==== <---------ARR14(2)                                     <------MYB83--------->ANAC58        <-------- --------->ARR14(2)                    ---------->DOF2  <------MYB46(1)       <---------ARR11(3) ---- ------>ANAC58                        <---------WRKY12 --------->MYB59 <---------ARR14(2)   <-------- ------>ANAC46                   ---------->DOF2      <--------P    --------->ANAC58<---------TOE1(1) ------>ANAC58              --------->ANAC58         <---------MYB52(1)--------->ARR14(2)  <------NtERF2 ------LBD16                --------->ANAC58   <---------GLK1(1)  --------->MYB52(1)<---------TOE2(1)   tcggaactgcgttgtaatgggaaacaaaacaagcagaaagtcaaaggagaaatcgggtaggaactacacaacggaactgagatcgtacgaggctgcatgt  16424800                                                                --------->ANAC58                                                                --------->ANAC46                                                                --------->ANAC58                                                     --------->bZIP60(1)                                                     --------->bZIP60(2)                                                     <---------ANAC46                                                     ----------->GT1                                           ----------->HVH21   <---------ZAT18                                           --------->DEAR3(1)  --------->ZAT18                                      --------->ANAC58------->MYC3                                      --------->ANAC58<-------MYC3                              --------->ANAC58       <---------TGA1a                              --------->TGA1a        <---------bZIP60(1)                              --------->ANAC46       <---------ANAC55(2)                              --------->ANAC55(1)    --------->ANAC55(2)                              <---------ANAC55(2)    --------->O2                              --------->ANAC55(2)    --------->TGA1a           --------->ATERF1(1)                       <---------ETT(2)   --------->ANAC58  --------->ANAC58   <------NtERF2 =======================================bZIP_DOF     <---------O2        <-----------RAV1(2) -AtLEC2      <-------TEIL<---------ALFIN1--------->ANAC58  --------->ANAC58 <---------ANAC46 ------>DOF2 --------->GLK1(2)<---------TGA1a      ------------->DYT1<---------STY1(2)     ------>ZmHOX2a(2) -ANAC46    <---------ARR14(2)--------->ANAC58   <-----------HVH21   --------->STY1(2)<-------TEIL   aaagaagacatggagattcagtctttcgacacacgtatgcaggcacggacgagtcacgtgataagcacgctagctacaggcgtcgaggttcgatcgctct  16424900                     <---------WOX13(1)                   <---------MYB46(3)                   --------->ATHB12                             ------>ZmHOX2a(2)                  --------->ICU4                              --------->ARR11(3) --------->ARR11(3)           ---------->DOF2                ------->TEIL        <---------ARR11(3) <---------ARR11(3)         ----------->HVH21   <---------ZAT14            ---------->DOF2      ---------->DOF2     ----        --------->LBD16      --------->ZAT18        --------->ZAT18        --------->ANAC58      ----       <---------LBD16       --------->ZAT14       --------->ALFIN1        --------->ANAC58  --------   cgtttgattccctgaaagcagtgattgggagtttactggacatgaaccaagaagtggccaaagtgatcttggattgcaagaaagacatttggaagaatca  16425000                                    <---------ANAC58                                    <---------ANAC46                                    <---------ANAC58                                   <---------STY1(2)                                                <                                   --------->STY1(2)                                             <---                         <----------DOF2                                                      -------                   <---------HSFC1(2)                                                        <-------  --------->ICU4   --------->HSFC1(2)                                      <---------ANAC58  -------- ----->ANAC58      <---------At4g35610                         <----------DOF2     <---------------AtSPL8 ----->ANAC58      --------->At4g35610                 --------->TOE2(3)   <---------ANAC58 --------- ->GLK1(2)    <---------------------WRI1               <----------DOF2    <-----------------------TaNAC69(2)   agaaatgtttgagttcgtcgaagcttactttgagactagcttgaagacgctcgacttctttaatgctttgaagagaggcctgcaaggagtacaaattaat  16425100       <---------YAB1 <----------DOF2 ---------DAG2 --------GT1 -->WOX13(1)                                                         <-----------GT1 --AHL20(2)                                                <----------DOF2 ->AHL20(2)                                            --------->ANAC58 >AHL20(2)     <---------At4g35610                     --------->ANAC58   <----------DOF2        <---   caccttttcattcttggtgctgttcagcattttgaagaagagagccttattcaaggcaagacttttcttattttctcttttgttttcttctggttttgac  16425200  Previous    Next  AGI:  At4g34330.1    Description:  Identical to UPF0496 protein At4g34330 [Arabidopsis Thaliana] (GB:Q9SYZ8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Range:  from: 16424717    to: 16425894    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g34332.1    Description:  other RNA Range:  from: 16424720    to: 16425894    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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