Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC46                                   <---------AHL20(2)      --------->YAB1                <---------ALFIN1                                   --------->AHL20(2)     <---------ATHB12            --------->ARR14(2)   <---------ALFIN1         <-----------GT1          ------->TEIL                   --------->ANAC46  --------->ZAT18        --------->AHL20(2)  ---------->DOF2                        --------->ANAC58  <---------ZAT18        --------->YAB1<---------ATHB12 --------->WOX13(1)          --------->ANAC58 --->AtMYB61            <---------ATHB12--------->YAB1------------>CBF            <---------AtLEC2   ctagcccacttgttctctcaagctcaataatatccatataaatcatcaaaagatgaatcaatcacaaaaattcacaactaatttgcacgatacacctcat  16406600                <------------CBF               --------->ATHB12               <---------ICU4              <---------YAB1             <-----------TGA1             <-----------HVH21                                     ----------->GT1           ---------->ID1                ----------->GT1        ---------->DOF2    <---------ARR11(3)              ---------->DOF2           ----------->HVH21    --------->AHL20(1)       <---------TOE2(3)         <------ZmHOX2a(1)       <---------YAB1    <---------AHL20(1)      <-----------GT1    --------->AHL20(2) --------->DAG2  ------->TEIL   gaacaaaatattcgtcgtcattgccactattaacgattcaaagtggtaaaaaaatcaggaagcagtgaaaggtgaaacctcatgaatctctagactctaa  16406700                                                                                                 <---                                                                                            <--------                                                                                            ---------                                                                                      ===============                                                                                   <---------ARR11(3)                                                                                   --------->ARR11(3)               --------->AHL20(2)                                            --------->YAB1 <--------           <---------AHL20(2)                     <-----------TBP       ----------->GT1     ---------     --------->YAB1                        <------------CBF           <------------CBF<----------DOF2   tgcataaacatatttcattatatatcgtagtagaatactgagacacattgacatatataagtatcaaacagaaattgtataatggtatctttattttatt  16406800     <---------ANAC58     <---------ANAC58     --------->ALFIN1    ------->MYC3    <-------MYC3   --------->TGA1a   <---------TGA1a  <-------MYC3  ------->MYC3                                            <---------TOE1(3) --------GT1                                              <---------TOE2(3) -AHL20(1)                                      --------->AHL20(2)    <---------MYB52(1)     <------- >AHL20(2)                                   <----------DOF2         <---------RAP2.6(3)     -------- ============bZIP_DOF                     <---------ARR11(3)       <------NtERF2             -------- -AHL20(2)                            --------->ANAC58   ---------->DOF2                     <------- >AHL20(1)                            --------->ANAC58  <---------AHL20(2)             <---------AHL20(2)   aacacatgtgtgcgtcaatgtgaatcagatagaattagacacactatctttttaatatttaaagttggagccgttttggtcaaaactaatttatgtgcac  16406900                                                               <------NtERF2                                                              --------->LBD16                                                             <---------ANAC58                                                             <---------ANAC46                                                             <---------ANAC58                                                            <------NtERF2                                                            <---------LBD16                                                            --------->ATERF1(1)                                                          ----------->HVH21                                                          --------->ALFIN1                                                          <---------DEAR3(1)                                                        <---------TGA1a                                                        --------->TGA1a                                                        <---------O2                                                        ===================================bZIP_DOF                                                        <---------ZAT2                                                        --------->At4g35610       <-----------TBP                                  --------->O2     <---------AHL20(2)                               <-----------RAV1(2)     --------->AHL20(2)                            --------->ANAC58    --------->AHL20(2)                    --------->DAG2<---------At4g35610 --ZAT14                                 ---------->DOF2--------->ZAT2 ->ZAT18                                 =========================bZIP_DOF ->ZAT14                           ----------->GT1 --------->ANAC58             <----------DOF2 --ZAT18 <---------AHL20(2)      <------------CBF  --------->ANAC46 <---------AtMYB61          ------   tactcatttatttataggttttttaaaaacacaaaaattgtgaaaaagcttctaagccaggtggcgggttttggtgcaaagtctttgatatgttcggagt  16407000                                                                              --------->ATHB12                                                                             <---------YAB1     <---------ANAC46                                                      --------->CCA1(2)   --------------->AGL15                                         <---------ICU4  *TSS    ----------->GT1--------->YAB1                          --------->YAB1   --------->ATHB12 <---------At4g35610    <---------YAB1       ---------->DOF2    <---------ATHB12<---------WOX13(1) --->GLK1(1)       <----------DOF2      ---------->DOF2 <------NtERF2   <---------TOE2(3)   tgctgcttcgtagagaaaaaacttttctgataacatcggagtaaaaggaaagtaagtcggagtttaatcatcttaagatttgattgaatggctacgctca  16407100                                                                         <----------DOF2                                      <-----------GT1       <---------ARR11(3)                 <------ZmHOX2a(1)<----------DOF2           --------->ARR11(3)              ---------        -------->P             <-----------GT1             <---------CCA1(2)               ----------   ctgaaatagcaacccttgaggagaagtgagttttttcttttcaccttctatttctatgtgtatatcttatctactcttttgaaattaagacagaaaagtt  16407200                                                          --------->TOE2(3)              <---------ARR14(2)                      <----------DOF2             <------ZmHOX2a(1)                       <---------DAG2                               <--           <---------TOE1(2)                       --------->ARR11(3)                     -----------    --------->ALFIN1                               <---------ARR11(3)            <---------ARR14(2)<- >DAG2     <---------TOE2(2)                ----------->GT1   <---------YAB1     --------->MYB52(1)<- >DOF2   --------->TOE1(2)    ---------->DOF2     <-----------GT1               <------ZmHOX2a(1) ---   agagatgtgttcgtaggattgggtttttgtctgaaagactgaaactttgtaaataccttttcttaaaattgatgagtttggaggaacggtttcagtaaat  16407300                           <---------DEAR4(1)                           --------->ETT(1)                           <---------DREB2C(2)                           <---------At1g77200                           <---------DEAR3(1)                          <---------ORA47(1)                            --------->ATHB12                        <-----------RAV1(1)                            <---------YAB1 -------TOE2(3)  <---------MYB52(1)                                  <----------DOF2      <---------- >GT1       --------->GLK1(2)                                  <---------At4g35610       <---------YAB1 -----MYB83<---------GLK1(2)                            <---------ARR14(2)     <------ZmHOX2a(1) -----MYB46(1)  <-------GAMYB                           --------->ARR14(2)   <---------TOE2(3) ------>MYB59  <-----------RAV1(1)          --------->GLK1(2) ------->TEIL<---------WOX13(1)   taggttgtgtttcgattctgttgtttttgtcggtgttcttcgtgagaatttgtctgaatttctgcatcttcctttgattgaggattgttttttgattctg  16407400                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     <---------ANAC58                                                             <-----------GT1     <---------AHL20(2)                   <------ZmHOX2a(1)                    <----------DOF2      --------->ICU4                 <---------TOE1(3)                     <---------ANAC58     <---------ANAC58                 <---------TOE2(3)                     <---------ANAC58     <---------ANAC58   <-----      <----------DOF2                          --------->ANAC58      <---------LBD16      --------->AHL20(2) --------------ANAC81   ---------->DOF2        --------->ANAC58     <---------LBD16       <---------AHL20(2)   ttctatagcttttgctcttaaggaatcaaagaaggcaagtttttttgtcaagtcatggctttttttctgtttcggggtgcttattaatttgtttaattct  16407500  Previous    Next  AGI:  At4g34272.1    Description:  unknown protein Range:  from: 16406430    to: 16406546    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g34280.1    Description:  transducin family protein / WD-40 repeat family protein. similar to WD-40 repeat family protein / katanin p80 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G61210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78929.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70869.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro domain U2A' (InterPro:IPR003603) Range:  from: 16407002    to: 16410789    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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