Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->CCA1(2)                                           --------->ARR11(1)                                           --------->ARR11(3)                                         ----------->ARR10                                       ------>ZmHOX2a(1)                                      --------->TOE2(3)                                      --------->TOE1(3)                                   <---------ARR14(3)                                   --------->ARR14(3)                                   <---------ARR14(2)                                   --------->ARR14(2)                                   <---------GLK1(2)                                   <---------ARR11(3)                                      <-------GAMYB                             =================HOX2a_HOX2a                                 --------->MYB52(2)                             --------->CCA1(2)                                            <----------                             <------ZmHOX2a(2)                                            <---------MYB46(3)                            --------->AGP1 <---------ARR14(2)                             --------->MYB55(2) ----------->HVH21          --------->ARR14(2)                                            --------->MYB111(2) ---->LBD16                 <---------ARR14(2)                               --------->ANAC58 ----LBD16                 --------->At4g35610                       --------->ALFIN1 --------->ALFIN1 ---LBD16           <---------ANAC58 ------>ZmHOX2a(2)           --------->LBD16   --------->DAG2 -ARR14(2)          <---------ANAC58<------ZmHOX2a(2)          <---------LBD16   ---------->DOF2 >ARR14(2)    --------->ARR11(3)   --------->ARR11(3)<---------HSFB2a(2)     --------->ANAC58    <---   ggagtgacccgttgaagaaattgctagacagatccaagatccttagatatggaatcgagaacaagtccggagtgatggaacccaaaaggtgtttgttggg  16383800                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                     <---------ETT(2)                                                                     <---------ZAT18                                                                <---------O2                                                                --------->O2     <---------REM1(1)       <---------ANAC58                                         ----------->RAV1(2)       <---------ANAC58                                    ----------->HVH21     <-----------RAV1(1)      <---------ZAT2                           <---------ZAT2   --------->At4g35610         ---------     ------>MYB46(1)            --------->ALFIN1          <-----------HVH21 --------->YAB1 <---------YAB1     ------>MYB83             <---------ANAC58 --------->ZAT2   <---------At4g35610      --------->YAB1 -RAV1(1)                     <---------ANAC58--------->ANAC58  =============================RAV ------------AtSPL8           <---------ANAC46--------->ANAC58<---------ALFIN1   --------->ALFIN1   aagtaccaagcttgtgactctgaacatgtctggtgtgttaggcttcccaagctctgtacatgtgacacctgtccacaagcatggtgttgcatcatcatag  16383900                                                                                              <------                                                                                              <------                                                                                           --------->ALFIN1                                                                                         --------->ALFIN1                                                    --------->At4g35610                  <-----------RAV1(1)       --------->LBD16                       ---------->DOF2                             <---------ANAC46      <---------ANAC46               <---------ANAC46  --------->At4g35610   <---------ARR11(3)      <---------ANAC58          <------ZmHOX2a(1)   <---------At4g35610      --------->ARR11(3)     -     <-----------------------TaNAC69(2) <---------ARR14(2)            <---------ZAT6     <---------ANAC58 >YAB1<---------ANAC58 <-----------HVH21--------->ARR14(2)      --------->AtMYB61        <---------ANAC58   ttccaattgcgtagaacagagagagggtcagtgaggatggagtatttgaaagtaagcagaagaacaccatcagtgttaagagcttggagttgtgtgggga  16384000                                           <-------GAMYB                                          <-----------RAV1(1)                                      <---------ANAC58                                      <---------ANAC46                                   <--------P                <------ZmHOX2a(1) <-------GAMYB     --------->DAG2         ==========================RAV    ---------->DOF2    --------->YAB1 <---------ANAC58 ---PCF2       --------->ZAT18   <---------MYB46(3)              --------->ARR11(3)                 < ----ID1--------->ALFIN1    <-----------RAV1(2)            <----------DOF2              <---------ICU4 --------->DOF2<----------ID1  <------ZmHOX2a(1)        <---------ARR11(3) <-----------GT1          <   caaaaagaaagtggaagaggactaatgagaacaggaggttgcttctgttggaagtcatggtctttcagttcttggtttctccctctctaactattacatt  16384100                                               <---------ATHB12                                              --------->ANAC58                                              --------->ANAC58                                              --------->ANAC46           <---------AtLEC2                --------->MYB46(3)              <---------ARR11(1) <----------DOF2                         <-----------GT1                  ------>MYB46(1) ---------ANAC58                --------->CCA1(2)                  <-----------HVH21              *TSS ---------ANAC58   ---------->DOF2 <---------TOE2(3) --------->CCA1(2)    ------>MYB83  --------->ALFIN1   tggctttgcattttcatggcagaaagagagagagatagaggttgaaccactcaagagataagttgttctggtcaccaaatctatgagatagtggagcaat  16384200                                             <------NtERF2                                            --------->LBD16                                          <---------LBD16                                    ---------->DOF2                                 --------->TOE2(3)                                 --------->YAB1                                 --------->TOE1(3)                               <---------ARR14(2)                               --------->GLK1(2)                               <---------ARR11(3)                                         --------->ALFIN1                               --------->ARR14(2)             <----------DOF2             <---------REM1(1)             <------ZmHOX2a(1)<---------GLK1(2)      --------->AHL20(2)    ----------->HVH21     ----        <---------REM1(1)     <---------ARR14(1) ----------->GT1  <-----------GT1 ----------->HVH21   ctctgagatggtgaaggagagagagagagagagaatcttaaagagccggagttgataaaataagcttttgactagacttgacatgggacaaggtgtagaa  16384300                                                     --------->RAP2.6(2)                                                   --------->ZAT2                                                   <---------ZAT2                                                   --------->At4g35610            --------->YAB1                        ----------->RAV1(1)    <---------YAB1                              <---------At4g35610                               ---   <---------GLK1(2)                            --------->At4g35610                               ---  <--------ATHB1            <---------ZAT6      --------->ZAT2            <---------ARR11(3)      ---  --------->YAB1            ----------->GT1    ----------->RAV1(1)        --------->ARR11(3)    ----- --------->ICU4       --------->ATHB12       --------->At4g35610      <---------AHL20(2)   <---------TOE2(3) <---------ATHB12 <---------AHL20(2) --------->At5g28300   --------->ARR14(2)             ---------->DOF2 -------->CBF  <---------ICU4       ----------->GT1<---------At4g35610--------->AHL20(2)  --------->ZAT14   tcaatgattcttgatcatatttattcattagtgtaaaactgtaaatgagcagcagcagccatattttcgcatttaaaatctacttcattcactaaagtaa  16384400                           <---------At5g28300                          <-----------GT1                         <---------YAB1                       <---------ICU4                       <--------HAHB4                       -------->ATHB1                       --------->YAB1                       --------->ATHB51                       -------->HAHB4                      <---------ATHB51                      --------->ICU4                                                  ---------->DOF2                      <---------YAB1                                             ----------->GT1                    --------->YAB1                                             ---------->DOF2                    <---------ICU4                                        --------->AHL20(1) ------>ANAC46      <--------HAHB4  <----------DOF2                       <---------AHL20(2) ------>ANAC58     --------->AHL20(2)         <---------YAB1              <---------AHL20(1) ------>ANAC58     --------->ICU4  <---------ANAC58              ---------->DOF2--------->DAG2 ----->DOF2----------->HVH21       <---------ANAC58      <---------AtLEC2 --------->AHL20(2)   aagcaattcatgggggacagaataattattaccgcttgcttttgggttatttttggtttacatgaagaaaagctaataaaataaagttaaaagtctaaac  16384500                                                                  <----------ID1                                                             <---------ICU4                       <--                                                             --------->YAB1                       ---                       --------->MYB59                  ------>MYB83                             <---                  --------->HSFB2a(1)                 --------->DREB2C(2)                      ------                  <---------HSFB2a(1)                 --------->DEAR3(1)           <---------AHL20(2)             <---------HSFB2a(2)             <------ZmHOX2a(1)  <-----------GT1  --------->ANAC55(2)             --------->HSFB2a(2)             --------->YAB1  <--------HAHB4--------->ZAT18     <-----             <---------HSFC1(1)             ----------->GT1 <---------YAB1 <---------ZAT14     ------             --------->HSFC1(1)     ----------->GT1   --------->MYB46(3)   --------->ZAT14    -------            <---------LBD16        ----------->GT1 <-----------GT1<---------YAB1 <---------ANAC55(2)-      <---------AHL20(2)   <-------TEIL  ---------->DOF2------>MYB46(1)    <-------TEIL  ----------->GT1   tattgcattttttttctggaacatttcggtccatagaaagtttaaaaggataatcaccgactattattacgactaagtacagtatgtaattgagtaatta  16384600       <---------------AtSPL8       --------------->AtSPL3       --------------->AtSPL8 --------------->AGL15 ================================MADS_MADS <---------------AGL15 -------ARR11(3) ------>ARR11(3) ------CCA1(2) --->AHL20(2)                   <---------YAB1<---------MYB52(1)                               ------ ----AHL20(2)                <---------------AGL15                                   ------->TEIL --->YAB1        ============================MADS_MADS                              <-----------GT1-- -->ICU4     <----------DOF2 --------------->AGL15                          <---------TOE1(2)  ------ -------->TOE2(3)<---------------AGL15       <-----------HVH21           <---------ANAC46   ---------   tatctcaatgtagtactttctcatcttagaacttataagagaaaacccgttataggtttgccaaaacagagggtctcgtatgaaatgaaccatacattaa  16384700  Previous    Next  AGI:  At4g34220.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. Identical to Receptor protein kinase-like protein At4g34220 precursor [Arabidopsis Thaliana] (GB:Q94C77;GB:O49483); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G15300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47862.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 16381510    to: 16384198    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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