Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->MYB52(1)                                                  ------>MYB46(1)                                                  ------>MYB83                                                  -------->P                                                 --------->MYB55(1)                                                <---------MYB111(2)                                                --------->DEAR3(1)                                                --------->AtMYB61                                                <---------ALFIN1                                                <---------MYB46(2)                                                <---------MYB111(1)                                                --------->MYB46(3)                                          --------->ANAC58                   --------->ANAC46                                          --------->ANAC58                 --------->HSFB2a(2)                                       --------->ZAT18            --------->ARR14(2)             ----                                       <---------ZAT14            <---------ARR11(1)             <---                                     <---------------AtSPL3       --------->GLK1(2)          <-------                                     <---------At4g35610          ------->TEIL               <-------          <---------ALFIN1           --------->At4g35610       --------->RAP2.6(2)         --------->LBD16       --------->PCF2            --------->LBD16<---------MYB55(2)<---------ARR14(2)      --------->DEAR3(1)    --------->ANAC58         <---------ALFIN1  --------->DEAR3(2)<---------GLK1(2)<-----------ARR10    --------->ANAC46       --------->SPL7--------->SPL7 <------ZmHOX2a(2)  <---------HSFB2a(2)  <----    --------->ANAC58      --------->ARR14(2)   <------NtERF2 --------->At4g35610  --------->GLK1(2)<-  <---------ALFIN1        <---------ARR14(2)   --------->MYB46(3)<---------ARR14(1)     <---------At5g28300 -------ANAC58           <---------SPL7<---------SPL7  <-----------HVH21   <-----------RAV1(2)------- -------ANAC46          --------->DEAR3(1)--------->ANAC46   <---------At4g35610  --------->ARR14(2) -------ANAC58 <----------DOF2 <---------LBD16------>NtERF2 --------->DEAR3(1)    <---------ARR14(2)   gcttccacgctcccactcttttatcgccgttccaccggaagcgcacggcaccaacccgatcacagccgaatctgtttccaggcgattcttcaccgcgtta  16380900                                                                                           <---------ARR14(2)                                                                                          ------>NtERF2                                                                                         ----------->HVH21                                                                                       <---------LBD16                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                                     ------>ZmHOX2a(2)                                                                                     ================                                                                                    --------->CCA1(2)                                                                                    <------ZmHOX2a(2)                                                                                    =================                                                                                   <---------ARR14(3)           --------->HSFB2a(2)                                                     --------->AGP1           --------->LBD16                                                         <---------ARR11(3)           ------>ZmHOX2a(1)                                                       --------->ARR11(3)  --------->ANAC58      <---------ALFIN1                   <---------ANAC46        --------->ARR14(2)  --------->ANAC58      --------->ANAC46                   <---------ANAC58        --------->ARR14(3)  --------->ANAC46 --------->ANAC46                        <---------ANAC58        <---------ARR14(2) --------->SPL7   -------->P                        --------->ZAT14               --------->GLK1(1) ----->At4g35610  ------>MYB46(1)                   --------->REM1(2)             <---------GLK1(1) ------At4g35610  ------>MYB83                     --------->ALFIN1              ----------->ARR10<-- ----HVH21<---------LBD16    <---------DAG2       ------->MYC3               <---------LBD16    ----- ---DOF2 ----------->RAV1(2) <----------DOF2      <-------MYC3              --------->MYB52(1)  <---- -----DOF5.7(2) <---------MYB59  ----------->RAV1(2)<---------ZAT14        <---------ALFIN1--------->ARR14(2) --------SPL7   <---------MYB111(1)              <---------ANAC46         --------->MYB46(3)<-------- -->DOF5.7(2) ------->TEIL<---------ALFIN1    <---------WRKY12  <---------ZAT18--------->LBD16 <-----   gcgaacgccattcctggacctactccacacactttacctgtgtcaatgtcaacgtgtagtggctcgtgtgcttcttcccaccggagatctgcggacaggc  16381000                                                                                           ------>ZmHOX2a(1)                                                                                         --------->SPL7                                                                                       <-----------HVH21                                                                                      --------->bZIP60(2)                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                     <------NtERF2                                                                                    --------->DEAR3(1)                                                                                   --------->RAP2.3(1)                                                                                   --------->DEAR4(2)                                                                                   <------NtERF2                                                                                   --------->ATERF1(1)                                                                                  <---------RAP2.3(1)                                                                                  <---------ATERF1(1)                                                                                  --------->ABI4(1)                                                                                 --------->DEAR3(1)                                                                                 --------->RAP2.3(3)                                                                                 --------->RAP2.3(2)                                                                                 --------->ANAC46                 <---------ZAT18                                                 <---------DEAR3(1)                 --------->ZAT18                                                --------->DEAR4(2)              <------MYB46(1)                                                   --------->ERF1              <------MYB83                                                      --------->RRTF1(1)              <---------ANAC58                                                  --------->RAP2.3(1)             --------->MYB111(1)                                                --------->ATERF1(1)             <---------MYB46(3)                                                 --------->RAP2.6(1)    ------>ZmHOX2a(2)                                                           --------->ORA47(2)    =====================================HOX2a_HOX2a                            <------NtERF2  --------->ARR14(2)                             --------->MYB46(3)            <---------ATERF1(1)  <---------ARR14(2)                             <---------MYB55(2)            ------>NtERF2 <------ZmHOX2a(1)        --------->LBD16       --------->ANAC46               <---------RAP2.3(1) =======HOX2a_HOX2a     <---------LBD16         --------->ANAC58              <---------DEAR3(1) =======HOX2a_HOX2a  <----------DOF2            --------->ANAC58              --------->ANAC46 ----NtERF2  --------->MYB111(2)              <---------ALFIN1        <----------DOF2--------->LBD16 ---->ALFIN1 --------->MYB59--------->ALFIN1<---------ALFIN1     <---------AtMYB61------>NtERF2 -----DEAR3(1)<---------ANAC58         <-----------GT1        <---------AtMYB61<---------DEAR4(2) ---RAV1(2)  <---------AtMYB61        <---------AHL20(2)      --------->ALFIN1--------->ANAC58 ----LBD16   --------->MYB46(2)   <------ZmHOX2a(1)      <---------MYB46(3)   --------->ANAC58   ggaggatcgatgagtttggtgcgcattccggtggaaggattttatcccacacccagcgattgttgtggtggtctttgaagacgccgccgcgtcctgccat  16381100                                                                                             --------                                                                                           ----------                                                                                           <---------                               <------MYB83                                               --------->HSFB2a(2)                               <---------ANAC46                                           --------->YAB1                               <------MYB46(1)                                            --------->TOE2(3)                              <---------AtMYB61                                           <----------                              --------->MYB111(1)                                         <----------                        ------>ZmHOX2a(2)                                        =============HOX2a_HOX2a                       --------->CCA1(2)                    <-----------GT1      <------ZmHOX2a(2)                       <------ZmHOX2a(2)               --------->LBD16          --------->ARR11(3)                      <-----------ARR10              <---------LBD16            <---------GLK1(2)                      <---------ARR14(2)           ------>ZmHOX2a(2)            <---------ARR14(2)                      --------->GLK1(2)           --------->GLK1(1)             --------->ARR14(2)                      --------->ARR14(2)          <---------GLK1(1)             <---------ARR11(3)<--                      --------->ARR11(3)         --------->ARR14(2)             --------->AGP1    <--                      <---------ARR11(3)         --------->ARR11(3)          <---------WOX13(1)  ----                      <---------ARR14(3)         <---------ARR11(3)       <---------ZAT6 ------------  <----------DOF2     <---------AGP1             <---------ARR14(2)  --------->LBD16   ------>ZmHOX2a(1) <---------ANAC58     --------->ARR14(3)         <---------AGP1     <---------LBD16 ------>ZmHOX2a(1) <---------ANAC58   ----------->ARR10           <---------CCA1(2)  <---------LBD16------>ZmHOX2a(2)   attgctttgtccagagagtatgaagatctgatttggtggaattggagattggatctccggtttatcttcaccgggagtgatagatcctccttccataatt  16381200                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <      <----------DOF2                                                                               < ->ATHB51                                                                                          -- ----->AGL15                          <---------ANAC58                                             -- ------AGL15                          <---------ANAC46                                             <- -------AGL3                 --------->ARR14(2)                                                    -- -------AGL1             --------->YAB1                                                            <- ----MYB83            --------->bZIP60(1)                    --------->ANAC58             ----------- ----MYB46(1)         <---------bZIP60(1)    --------->At4g35610           <---------ANAC58        -- ----->MYB59          <---------GLK1(1)      <---------At4g35610           <---------ANAC58  -------- ----->AGL3        <---------YAB1     <---------ANAC58       --------->ANAC58           ---------->DOF2   tggtatctctttggtagagtgatgatatcagaatacactatcgtgtgatcagaccatagaaataagctatcgagatgtcttgtctgaatagaaagtaaag  16381300     <---------ANAC58     <---------ANAC58    <------NtERF2 ------MYB46(1) ---------ANAC58                                         --------->ARR11(3) ------MYB83 --------->At4g35610                         --------->GLK1(2) ---------ANAC46                                        <---------GLK1(2) ---------ANAC58                                  --------->ZAT6 ------->MYB55(2)                                --------->ZAT18             <------MYB83 ------->MYB46(2)                              --------->REM1(2)             <------MYB46(1) --------AtMYB61                              --------->ALFIN1               <---------DEAR3(2)     < ------->MYB111(2)                            <------NtERF2                 <---------MYB46(3)    --- --------MYB46(3)                           <---------ANAC46                <---------DEAR3(1)<------MYB46(1) >GT1<---------ANAC46                       <---------ANAC58     <-----------------AGL1       <------MYB83 ------->MYB111(1)                          <---------ANAC58     <---------LBD16              <------ -->DOF2   *TSS         ------>ZmHOX2a(2)   --------->ALFIN1     ----------------->AGL1      --------   tttggtggggtgagcatcagagttgatcggagaagatgatgttgaggcgtggacactagaatcttggtccggtttgggtcggtctgtttaaaagtttggt  16381400                                                                           --------->AHL20(2)                                                <---------WOX13(1)        <---------ICU4                                             <---------AHL20(2)          --------->ICU4                                         <---------MYB46(3)        --------->GLK1(2)                                         <------MYB83             <---------GLK1(2)                                         <------MYB46(1)        <---------YAB1             <---------ANAC58                                        <---------AtMYB61       <---------TOE1(3)          <-------GAMYB                                     <---------ANAC46           ----------->ARR10          <---------ANAC58 ------ZmHOX2a(1)                    <-----------RAV1(1)     <---------MYB52(1)           <---------MYB46(3) ------>MYB59          --------->ANAC55(2)<<<<<<<<<<MYB80  <---------MYB46(3)--------->AHL20(2) ---MYB46(3)   <---------AHL20(2) <---------MYB52(1) <----------DOF2  <---------YAB1 <---------DAG2 ->MYB59    ----------->GT1      <-------GAMYB--------->ATHB12  <---------TOE2(3)    <----------DOF2   taggaagttagaccgagttaattttaagtgattcccgttgtgttggtttaattggcttcatcggttaagattctaatttttatatagctttttggttgtg  16381500                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                       --------->ICU4            ----                                                                      --------->ANAC58           ----                                                                 --------->DAG2   <---------ALFIN1                                                             ----------->GT1 --------->ANAC46    ----              ----------->GT1                     <---------ZAT6---------->DOF2 ----------->RAV1(1) <-----------GT1                    ---------->DOF2    <---------YAB1 --------->ANAC58          <----   atataacataacaaaacagtgaaacacattctaaactctaaagtaagagttagtattatgcgagggtaaagtaagcattaagcaacacatctaaaacata  16381600    --------->ANAC46    --------->ANAC55(2)    --------->ANAC55(1)    <---------ANAC55(2) ----->ANAC46 ----->ANAC55(2)                                                                               <----- ----->YAB1                                     <---------TOE2(3)               <---------ALFIN1 ---TEIL  <----------DOF2          <---------------------WRI1                 ----------->RAV1(1) <--   cataacacataactttctatattgccaaaacgacttaggctatacgaattaagaaatcaaactaaaacacaaattttctccaacacttgcaccaattctt  16381700                                                                                    --------->bZIP60(1)                                                                                    <---------bZIP60(1)                                                                                  ----------->RAV1(1)                                                                             <---------ANAC58                                                       --------->ANAC46      <---------ANAC58     <------MYB83                                      --------->ANAC58      <---------ANAC46     <------MYB46(1)                                   --------->ANAC58 <---------ICU4            ---     <---------MYB46(3)                               --------->ZAT18  ------>ZmHOX2a(1)      <------    <---------AtMYB61--------->ANAC58            ---------->DOF2   --------->ARR14(2)        ------>ZmHOX2a(1) -----DOF2  ----------->RAV1(2)                --------->TOE1(3) --------->At4g35610--------->bZIP60(2) -------AtLEC2       --------->ANAC58          --------->TOE2(3) <---------At4g35610--------->REM1(1)   tcatggatggtcgcttctgaggcaaggaagagacacattcaatccctaacctaaagcacgccattgcagcatcctcatggcgagcgacatcactcctaat  16381800  Previous    Next  AGI:  At4g34215.1    Description:  hydrolase. Identical to Probable carbohydrate esterase At4g34215 [Arabidopsis Thaliana] (GB:Q8L9J9;GB:O49483); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G53010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47861.1); contains InterPro domain Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181) Range:  from: 16380081    to: 16381311    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g34220.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. Identical to Receptor protein kinase-like protein At4g34220 precursor [Arabidopsis Thaliana] (GB:Q94C77;GB:O49483); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G15300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47862.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 16381510    to: 16384198    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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