Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         ------>ZmHOX2a(1)                                                                                      --------->TOE2(3)                 =====================bZIP_DOF                                        --------->TOE2(2)                 <---------O2                                                         --------->TOE1(2)                 --------->TGA1a                                                   --------->ARR14(2)      =====================MYC_MYB   --------->ANAC58                       --------->STY1(2)      ------->GAMYB        <----------DOF2                              --------->STY1(2) ----->AHL20(2)  <---------TGA1a     --------->ANAC58       <---------ANAC55(2)    <---------ARR14(2) ------AHL20(2)  --------->O2 ---------->DOF2          <---------bZIP60(1)  <---------STY1(2) ---->AHL20(2)   =====================bZIP_DOF <<<<<<<<<<<<<<<<<LFY     <---------STY1(2)   ttattcaacgctcgaactcacttggcaggctttaaagccaagcccattcagacagtggcatcaagtgagccaatagctagctacaaatcctaagagaatg  16367700                                                                                                    <                           <---------YAB1                                                          --                         <---------------AGL15                   --------->TOE2(3)                <--                    <---------ANAC58                          <----------DOF2                     <--                  ------>MYB46(1)                          <-----------GT1                  <--------                  ------>MYB83                         --------->AHL20(2)                  --------->AHL20(2)    <------ZmHOX2a(1)   <---------YAB1                --------->AHL20(1)                --------->YAB1  <---------TOE1(3) <---------ANAC58<-------GAMYB     <---------AHL20(1)               <---------YAB1  <---------TOE2(3)--------->ZAT2 ---------->ID1      <---------ARR11(3)             <---------At4g35610   gtttaaggaatagagacacctagcttactataatttgtcgttgtcaacaaaaacaatatatatactttcttaaacccataaatatgctgatgataaaatt  16367800        --------->TOE2(3)                                                            <---------ARR11(3)      --------->ARR11(3)                                                 <---------------AGL15      <-----------ARR10                                                  ------>ZmHOX2a(1)      --------->AHL20(1)                              <------ZmHOX2a(1)  --------------->AGL15      <---------ARR11(3)                             --------->LBD16 <---------ARR11(3)     --------->RVE1(1)      <---------TOE2(2) --------->ARR11(3)     --------->ARR11(3)   <---------MYB52(1)     --------->CCA1(1)      <---------TOE1(2) <---------ARR11(3)    --------->RVE1(1)--------->ARR14(2) ------ZmHOX2a(1)       <-------TEIL        --------->ANAC58   <------ZmHOX2a(1)    --------->GLK1(1) --------->GT1       <---------KAN4(1)      --------->ANAC58  ----------->GT1      <---------KAN4(2) -------TOE1(3)      --------->KAN4(1)      --------->ANAC46 <---------TOE1(3)    <---------GLK1(2) -------TOE2(3)     <---------KAN4(2)     <-----------GT1    <---------TOE2(3)---------->DOF2    <--- -AHL20(2)     ---------->DOF2    <-----------GT1  <---------LBD16  --------->CCA1(1)<---------ARR14(2)   aaggaaaatatcttagttaaagaatattcatatgttttacaaattcacgatattcaggaaattaaggaaaatatcctagttaaagaatatccatttgttt  16367900                                                 <---------YAB1                                               <---------ICU4                                               --------->YAB1                                              --------->ICU4                                           --------->AHL20(2)                                           <---------AHL20(2)                 <------ZmHOX2a(1)        <---------AHL20(1)          <---------RVE1(1)         --------->YAB1         <---------ARR11(3)       <---------ARR14(2)       --------->ANAC58           --------->ARR14(2)       --------->ANAC58    ------->MYC3   --------->AHL20(2)               <---------ARR11(3)       --------->ANAC46    <-------MYC3   <---------AHL20(2)               --------->ARR11(3)      --     <-----------GT1  <-----------GT1 ------>ZmHOX2a(1)         <---------ANAC46          >>>>>>>>>SARD1 --------GT1   <---------TOE2(3)  --------->GLK1(2)         --------->KAN4(2)             >>>>>>>>>CBP60g   tacaaattcacgatatttaggaaataacacgttgagaatcctaataaaattatgactgagataattccctgtagaaagattttaggcgagaaatttggag  16368000                                                      --------->WRKY12                                                      --------->WRKY38(1)                                                    --------->TOE1(3)                                              --------->ANAC58          --------->DAG2                              <---------ARR11(3)    --------->TOE2(3)  --------->DAG2                              --------->ARR11(3)  -------->P          ---------->DOF2                          ---------->DOF2     --------->ANAC46     <----------ID1                   <------ZmHOX2a(1)          --------->ANAC58 ---------->DOF2               --------                 <---------TOE2(3)     --------->ANAC55(2)  --------->ANAC58         <---------ATHB12     ---------->DOF2  ---------->DOF2  <---------ANAC58     --------->ANAC58         --------->MYB46(3) --------->GT1   <---------TOE1(3)     <---------ANAC58<---------WRKY18(1)     ------>ZmHOX2a(2)   acagaaaaaaagcttacttaaggaaaaagaaagagcttcttacttgataagcaaccttgaccactcaaagggaaaaggtgatcggcaaccatggatgatg  16368100                                          <---------AHL20(2)                                         --------->AHL20(2)                                      --------->ATHB12                                     <---------YAB1                       <------ZmHOX2a(2)                                     --------->ICU4          --------->ZAT18       --------->MYB46(3)                                   <---------ICU4            <---------ZAT18      ------>MYB83       --------->MYB52(1)          --------->YAB1           <---------ANAC58      ------>MYB46(1)       -------->P                 <---------YAB1            <---------ANAC58   --------->MYB46(3)    --------->At4g35610           --------->ICU4         ---------->CDC5 <---------ARR11(3) ->ATHB12 ----------->GT1<---------At4g35610      <-----------GT1        --------->ARR11(3)   gagaagagctaccggttaaaacaatgctgatgcttcatgatgatttaatattaaactgcttagcgcgcgtctcaagatcaaaccatccaactctctcatt  16368200                                                                  <---------ALFIN1                                                                 <------NtERF2                                                    ------->TEIL --------->ATERF1(1)      <---------ANAC58                                             ------>MYB46(1)     <---------SPL7           <---------ANAC58                                             ------>MYB83        <---------ABI4(2)       --------->At4g35610                                        <-----------GT1         <---------ATERF1(1)      <---------At4g35610                                      <----------DOF2--------->HSFB2a(1)            <---------ANAC58                          <---------ANAC58 <---------MYB59      --------->RAP2.6(2) <---------ANAC46                          <---------ANAC58 <---------MYB46(2)  --------->PCF2       <---------ANAC58             <-----------GT1          <---------DAG2--------->ARR14(2)      --------->ALFIN1   agtatgtaagagatttcactctctccttgcttcagtagagctttaccaaacccgaaccctcttaggccgcaccgagaggtgtttctacgtgtgcttacga  16368300                                                                   --------->MYB59                                                               <---------ARR11(3)                                                               <---------GLK1(2)                                                               --------->ARR11(3)       <---------GLK1(2)                                   ---------->DOF2     --------->ICU4                                      --------->LBD16 <---------SPL1(2)                                      --------->HSFC1(1) <---------SPL7                <---------YAB1           --------->HSFB2a(2)    <-----------GT1      < <---------ZAT14            <-------TEIL                <---------HSFC1(1)    <---------AHL20(2)   <- --------->ZAT14         <---------MYB46(3)             <---------HSFB2a(2)  --------->AHL20(2)  ----   ctccgtactgattctaaacaactacattggttcattcttggccagagacaatatagttccagaaagattttggtccaaattttatctcccaattctacct  16368400                                                                                                    -                                                                                                    -                      ------>ZmHOX2a(1)                                                             <                     <---------MYB59                                                                <                 <------MYB46(1)                                                                    -                 <------MYB83                                                                       -                <---------AtMYB61                                                                   <                --------->MYB59                                                                     -             --------->MYB55(2)                                                                     <             --------->ATHB12                                                                      --             <---------MYB46(3)                      ----------->GT1                               <-            --------->ALFIN1                     ---------->DOF2       <----------DOF2             <-        --------->ZAT14                   <------NtERF2                ==============================        <---------ZAT14                  --------->LBD16              <---------ZAT6               -- --------->LBD16<---------MYB46(3)      <---------ANAC46              <---------ANAC58             -- ---------ANAC46--------->MYB111(1)     <---------DEAR3(1)   <----------DOF2  --------->WRKY18(1)  -- --------LBD16 <--------P              <---------LBD16       ======================================== ------>CDC5<---------AtMYB61   ------>NtERF2<------ZmHOX2a(1)        <---------ANAC58           <---   ctgcgggtattgcagtggttggtcctaatatcgatgccattggcggaggaataaagagtaatactttgtctagcgttatggtcatggactctcgttctca  16368500          <---------At4g35610          --------->At4g35610      ----------->HVH21      --------->ALFIN1    <---------ANAC55(1)    <---------ANAC58    <---------ANAC58    <---------ANAC46   <------NtERF2 --------->ALFIN1              --------->ANAC58 ------>PIF5                   <---------ALFIN1 ------>MYC4                   --------->ANAC58 -------MYC3                  <---------LBD16 -------MYC2                --------->ATERF1(1) ------>MYC3                --------->PCF2 ------->ABF1              --------->ZAT18 -------MYC4              <---------ATERF1(1) ------>MYC2              --------->ALFIN1 -------PIF5             --------->ATERF1(1) ------->TGA1a           <---------PCF2 --------TGA1a         --------->LBD16 --------O2           <---------ANAC46 ========bZIP_DOF     <---------ANAC58 ------->O2           <---------ANAC58 ------->ANAC46 --------->ANAC58   <----------TaMYB80                   --------->ANAC55(2) ------->ANAC55(2)   <---------LBD16--------->KAN4(2)               --------->AHL20(2)      --------- ========bZIP_DOF<---------ATHB12  --------->HSFB2a(1)        ----------->GT1           --------->YAB1 ------ALFIN1   --------->ANAC58--------->LBD16           --------->ATHB12           ----------->GT1<   cacgtggcgtgaagctccaagcatgcgggtgccccgcatgttcccatcagtttgcacccttgatgggaaaatatatgtaatgggaggctgtgataatcta  16368600  Previous    Next  AGI:  At4g34170.1    Description:  kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At4g34170 [Arabidopsis Thaliana] (GB:O49488); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G23580.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch repeat type 2 (InterPro:IPR011498); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domai Range:  from: 16368091    to: 16369029    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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