Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------ZAT14                           --------->HSFB2a(2)                            --------->ZAT14                         --------->MYB52(1)                      <---------ARR14(2)                  --------->ANAC58  ----------->RAV1(1)       <---------ANAC58     --------->MYB52(1) <-----------GT1      --------->GLK1(2)<---------ANAC58 >ANAC58          --------->ANAC58 <----------ID1             <---------ANAC46                <------ >ANAC58    <------ZmHOX2a(1)  ---------->DOF2        ----------->HVH21   --------->ZAT18    <-------TEIL >ANAC46   ----------->GT1 <---------HSFB2a(2)     <---------AGP1--------->ARR14(2)       <---------ANAC46   ttctcacaaacggaggaaaaacgaaattaccagaagagcaacaagagactctagctctgaaatggcgtatagggagagcagtagagggagttatgtgcat  16330100                                                                    <---------HSFB2a(1)                                                                    <---------HSFC1(2)                                                                  <---------GLK1(2)  *TSS                                                      ------>ZmHOX2a(1)          <---------At4g35610                                                <---------At4g35610 --------->HSFB2a(1)                        <---------CCA1(2)<---------ZAT14     --------->MYB52(1)  --------->At4g35610                      <---------CCA1(2)  --------->ZAT14<---------ALFIN1--------->ANAC55(2)  --------              <---------ANAC58    <----------DOF2    --------->TOE2(3)  --------->YAB1    --------->At4g35610 ---AtLEC2    <---------ANAC58<---------CCA1(2) --------->At4g35610 --------->HSFC1(2) --------->At4g35610   cgaaatcgaacccatggcttcttcttatctctctatctttctcttcactctgcttcctcaacctcacagaattttcgtaattcagcagtagcagcaaaag  16330200                                                                                                -----                                                                                         ---------->DOF2                                          --------->AHL20(2)                          ----------->RAV1(1)                                   <----------ID1                                     ------>MYB83                                   ----------->GT1                                    ------>MYB46(1)                        --------->At4g35610                       ------------>CBF --------->ANAC58   <------------CBF     <---------At4g35610                    <-------GAMYB       --------->ANAC46 -->DOF2         <---------YAB1  ---------->DOF2              ----------->GT1      --------->ANAC58 <   atagccattgattttgtttctgattcagcaaaaaaaaaagaaaaaaaaatgagatgggcttagtctgttacaatttaaggcccaaacccaacaaagacta  16330300          ----------->RAV1(1)         <---------ETT(1)         ------->GAMYB         <----------ID1         --------->DREB2C(2)        --------->MYB46(3)                                                 <---------LBD16        --------->DEAR3(2)                                                <-----------------AGL1      <---------ARR14(2)                                    --------->MYB52(1)         ------>MYB83      --------->ARR14(2)                                    -------->P   --------->ARR14(2)      --------->MYB52(1)                                   --------->MYB55(1)          -------->P     ----------->HVH21                                     ------->GAMYB <---------ARR14(2)   --------->ANAC55(1)                                    <---------MYB111(2)    --------->MYB59   --------->ANAC58                                       --------->MYB46(3)   --------->ARR14(2)   --------->ANAC58                                       <---------MYB52(2)   <---------MYB52(1)   --------->ANAC46       <---------AHL20(2)             <---------At4g35610   <--------P   --------->ANAC55(2)   --------->AHL20(2)              --------->At4g35610   <---------ARR14(2)   <---------ANAC55(2)   <---------AHL20(2)<------MYB83<---------WRKY12--------->ANAC46------>MYB46(1) ----->DOF2         <-----------TGA1       ----------->GT1<---------MYB55(2)  <-----------HVH21 ----- -----------------------TaNAC69(2)         <------MYB46(1)<---------MYB46(2) --------->LBD16 <-------   aagacgcgtaaccgacaaaaaccgtcattaaatgtgcaagagggaaggtcaatttcgtcaactaccggtttacaagacccggttaggcctaccatataat  16330400                                                               <---------ICU4                                                               <---------AHL20(2)                                                               -------->HAHB4                                                              <---------YAB1                                                            -------->HAHB4                                                            <--------HAHB4                                                            --------->ATHB51                                                            <---------ICU4                                           <---------AHL20(2) --------->ICU4                                           <---------YAB1  <---------ATHB51                                <----------DOF2            --------->ICU4                               ==============================HOX2a_HOX2a                               ------>ZmHOX2a(2)           <---------YAB1                              ===============================HOX2a_HOX2a                ------>ZmHOX2a(1)                              <------ZmHOX2a(2)            --------->AHL20(2)      <----------DOF2                             <---------ARR14(2)       --------->YAB1              <---------DAG2                             <---------ARR11(3)       <------ZmHOX2a(1)         ------>NtERF2<-------                             --------->ARR11(3)  --------->HSFB2a(2)           --------->ANAC58                         <-----------GT1  <---------AHL20(2)--------->YAB1     --------->ANAC58                        <-----------GT1   --------->AHL20(2)<--------ATHB1    --------->ATERF1(1) <-- ------->CBF        <---------AHL20(2)   --------->YAB1  --------->YAB1      <---------ATERF1(1)<---- --AHL20(2)  <----------DOF2 --------->ARR14(2)  <---------HSFB2a(2)    *TSS--------->ANAC46 --------   caattttctcggtgtctttgattttttttccgatctttttctattttaattctcgaggataataattattcgcgatagacgacgcctttcctcttagctc  16330500                                        --------->ATERF1(1)       --------->ANAC58                                       ------>NtERF2              --------->ANAC46                                       <---------ATERF1(1)        <---------ANAC55(2)                                       <---------RAP2.6(3)        --------->ANAC55(2)                                      <---------ANAC58     --------->ANAC46                                      <---------ANAC58    <---------LBD16                                 <-------GAMYB            --------->At4g35610                                --------->DEAR3(1)      <---------DEAR3(1)          --------->GLK1(1)                                <---------MYB46(3)<---------ALFIN1--------->ANAC55(1)   <------------                              ------>NtERF2 --------->ANAC46--------->LBD16         <---------GLK1(1)     --------->YAB1           --------->LBD16 <---------MYB52(1)  --------->ANAC58 <---------ARR14(2) --ZAT2                      <---------ALFIN1<-------GAMYB--------->ZAT18          --------->ARR14(2) ----NtERF2                  --------->DEAR3(1)  --------->MYB46(3)              --------->LBD16 -----DEAR3(1)     --------->ZAT18<---------MYB52(1)  <-----------HVH21         --------->LBD16   <-- ->ZAT2            <---------ZAT18--------->ATERF1(1)--------->DEAR3(1)        <---------LBD16    ---   ggcgttatcagactcaccgagtcgactcgctccgccgttgccgtctccgttaccaccgtctgcgcaatacgtaattcatagcccggatttctctatggag  16330600                                                                 ------->TEIL                                                                 <---------ARR14(2)                                       <---------At4g35610       <---------ARR11(3)                                 <---------At4g35610             --------->ARR14(2)                                 --------->ATERF1(1)             <---------ARR11(1)                                 <------NtERF2                   <-----------ARR10                                 --------->At4g35610            <---------ARR14(1)                                 <---------ZAT2                 <---------CCA1(2)                                <---------ATERF1(1)            --------->LBD16            <-------TEIL       <---------RAP2.6(2)            --------->ANAC55(2)          --------->ARR14(2)   <---------DEAR3(1)             <---------ANAC55(1)          <---------GLK1(2)    <------NtERF2                  <---------ANAC46      ------>NtERF2            --------->ATERF1(1)            <---------ANAC58     ------>NtERF2            ------>NtERF2                   <---------ANAC58     --------->LBD16          <---------LBD16                 <---------ANAC55(2)             -------    --------->ANAC46         <---------ANAC46            --------->HSFB2a(1)               --------->DEAR3(1)   <---------LBD16           <---------ANAC58            <---------HSFC1(2)               -----------   --------->LBD16        ----------->HVH21              --------->HSFC1(2)               <---------- ---AGL15 <---------ARR14(2) <---------ANAC58    --------->ATERF1(1)       <<<<<<<<<TBF1--------->ANAC46 -------GLK1(1)           <-----------RAV1(1)   <---------ATERF1(1)     <<<<<<<<<TBF1  ------>ZmHOX2a(1) ------>GLK1(1) --------->WRKY38(1) <---------At4g35610  <---------HSFB2a(1)     ------>ZmHOX2a(1)   atttccccggccgattcgttgtccatctctggcgcggctgcttctgaggtcgtctccgagccttccgtatcttcttcttcttcctcttcctcgccgaatc  16330700                                            --------->RAP2.3(1)                                            <------NtERF2                                           =                                            <---------------------WRI1                              -                                           <---------RAP2.3(1)                                     <-                                           ------>NtERF2                                           ==                                           <---------ATERF1(1)                                     --                                    <---------ARR14(2)    <---------SPL7                           --                                    --------->ARR14(2)  <---------------AtSPL8                    <--                                <---------ZAT14       ------>ZmHOX2a(2)                           ---                               ==============================HOX2a_HOX2a                          ---                             =============================HOX2a_HOX2a                             <--             ======================HOX2a_HOX2a      --------->ARR14(2)                            ---          <---------ATHB12   ------>ZmHOX2a(2)      <---------ARR14(2)                            <--         --------->ARR14(2) <------ZmHOX2a(2) ----------->RAV1(1)                                 ---      --------->MYB46(3)   --------->ARR14(2) ------>NtERF2                                       <--     --------->ANAC58      --------->ARR11(3)----------->HVH21      <---------ICU4               <---     --------->ANAC46      ------->TEIL   <---------DEAR3(1)       --------->ICU4              <-----     --------->ANAC58      <---------ARR14(2)--------->ETT(2)      <---------YAB1             <------ -->GLK1(2)  <----------DOF2==============================HOX2a_HOX2a ----------->TGA1<------ZmHOX2a(1) ------>AGL1 ------>ZmHOX2a(1) ------>ZmHOX2a(1)   <------ZmHOX2a(1)--------->YAB1    =============== -------AGL1 =======================HOX2a_HOX2a<------NtERF2<-------TEIL              ===============   aggcatcacccaatcctttctcaaacatggatcctgcagtttcgacggcgacaggatcgaggtacgttgatgatgacgaagatgaagaggacgtttgcag  16330800       --------->GLK1(1)       <---------GLK1(1)  --------->At4g35610 ==================HOX2a_HOX2a ----->ZmHOX2a(2) -----ZmHOX2a(2) ==================HOX2a_HOX2a ------->At4g35610 ------->GLK1(1) -------ARR14(2) ------>ARR11(3)                          --------->LBD16 ------>GLK1(2)                          <---------ANAC58 -------AGP1                             <---------ANAC55(1) ------>ARR14(3)                         <---------ANAC58 -------ARR14(3)                      <---------ARR14(2) ------>ARR14(2)                      --------->ARR14(2) -------ARR11(3)                     <---------GLK1(1)                                           <--- ---ZmHOX2a(1)                    <---------------ANT <---------ANAC46                           <--- ----TOE1(2)              <---------ARR14(2)         --------->At4g35610                 <-----------HVH21 ---AtLEC2  ------>ZmHOX2a(1) --------->At4g35610    <---------At4g35610                 ------>ZmHOX2a(1) ======HOX2a_HOX2a        --------->ARR14(2)         <---------LBD16            --------->ARR14(2) =====HOX2a_HOX2a         --------->GLK1(2)    ----------------->AGL1          <------ZmHOX2a(1) <---   gatctgcagaaatcctggtgatgcagacaatccgcttcggtatccgtgtgcctgtagcggaagtatcaaatttgttcaccaggattgtctccttcagtgg  16330900                                                                                                    <                                                                                                  ---                                                                                                  <--                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                                                          --------->ARR14(2) --------                                                                  --------->GLK1(2)         <--------                                                                 <---------ARR11(3)         ---------                                                          <---------MYB46(3)                ---------                                                         <---------WOX13(1) <-------TEIL    <--------                                             <----------DOF2     --------->ARR11(3)         ---------            ------->GAMYB                  ------>ZmHOX2a(1)   ----------->ARR10          -----------   --------->YAB1                       ---------->ID1  >>>>>>>>>ARR2     --------->ARR11(1)<-------- ------ANAC46                        <----------DOF2  <---------AHL20(2)  <---------ARR14(2)<-------- ------ANAC58     <<<<<<<<<WRKY18 <-----------GT1 <---------AHL20(2)      <---------GLK1(2) --------- ------ANAC58   <-----------HVH21---------->ID1  <---------YAB1<---------TOE2(3)    <---------YAB1<--   cttaatcacagcaacgctcgtcaatgcgaggttttgtttcttttcctctttattatttgattgttgagattttgaagattcgtattctaattaagatctg  16331000  Previous    Next  AGI:  At4g34090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47838.1) Range:  from: 16326888    to: 16330185    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g34100.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G32670.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ59867.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71894.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Zinc finger, variant RING-type; (InterPro:IPR011016) Range:  from: 16330472    to: 16335079    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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