Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ------>ZmHOX2a(1)           <---------ARR14(2)           --------->ARR14(2)         --------->LBD16     --------->GLK1(2)     --------->ARR14(2)     <---------ARR14(2) <---------At5g28300                                           <------ZmHOX2a(2)    <---------GLK1(2) <-------TEIL                                                   <---------ARR14(2) ----TOE1(3)   <----------DOF2                      --------->AHL20(2)           --------->MYB52(1) ----TOE2(3)<------ZmHOX2a(2)                 <---------ALFIN1         --------->ANAC46         -----   gttagagaatcccgatcctttagattcacagctattgcaattgaatcaacacattaaaacaaaaaccatttccacataaaaaaaaacgatccagtaaatg  16308300                                                                                         <---------ATHB12                                                                           --------->AtLEC2       <--                ------>ZmHOX2a(2)                                         --------->TOE1(2) ---------               <------ZmHOX2a(2)                                        ------->TEIL    ------>MYB83<              <---------ARR14(2)             ---------->DOF2          <---------ZAT18   ------>MYB46(1)     <-------TEIL              ---------->DOF2                      --------------->AtSPL8--------->YAB1 ---->AHL20(2)--------->ARR14(2) ----------->GT1                --------->GLK1(2)      --------->WOX13(1)   aaatagattcaagaccgatcgtcgagcggtagagaaagtaaacaaaacaaagacagagaattgaagaaactgtgtacctgcaaaaataccaatcagatgg  16308400                                                                           <---------MYB46(3)                                                                          <--------P                                                                         <-------GAMYB                                                           --------->ATHB12--------->MYB55(2)      ---------->DOF2                                      <---------AHL20(2)   ------>NtERF2                                          <---------AHL20(2)   --------->LBD16                                        --------->AHL20(2)  --------->ANAC46                                <---------ANAC58       <---------MYB52(1) <---------LBD16                                  <---------ANAC58      --------->LBD16            <- -------GLK1(1) --------->At4g35610          ---------->DOF2          <---------LBD16    <------ZmHOX2a(1) >At4g35610  <---------At4g35610            --------->AHL20(2)      <-----------GT1   <---------LBD16 ---------ATERF1(1)                         <---------AHL20(2) <---------AHL20(2)<---------GLK1(2) <-   gtctccgccaaagtaatctgcttagaagttttgtaagaaaaaacaattaaaggcgtttcatttattgaattttccggttgtttgattctcaggatgagat  16308500                         <---------AHL20(2)                         --------->AHL20(2)                       <----------DOF2                                                --------->DAG2              ---------->DOF2     --------->ANAC46                   ---------->DOF2---------->DOF2 --------ANAC58   --------->ARR11(3)                     --------->ANAC46       ----------->GT1 ----- --------ANAC58   <---------ARR11(3)  ---------->DOF2   --------->LBD16   ---------->DOF2  ----------   tgcctatttccttcaaaaaagaactctttaatttacacagaaaagctctgaaaatttccacagaaaatgaagaaagaaaagagcgtaaaaggggaaagag  16308600            --------->AHL20(2)            <---------AHL20(2)                         <------NtERF2                *TSS           --------->AHL20(2)                        <---------ANAC46             --------->ARR11(3)     ----------->GT1       <---------MYB46(3)        <---------ANAC58       --------->YAB1 ---->CCA1(2)   ---------->DOF2                      <---------ANAC58     <---------WOX13(1) >DOF2    <---------YAB1  --------->ALFIN1 <------ZmHOX2a(1)           <---------YAB1<----------DOF2   atgaaatgggttattaaaaaaagaagcagtggatgagggaagagaggattaagaggcgtagagattacatgtgatgaatgatactatcttttcttacaaa  16308700                    --------->AHL20(2)                    <---------AHL20(2)                   --------->AHL20(2)                   <---------AHL20(2)                   --------->AHL20(1)                   <---------AHL20(1)                   <------MYB46(1)              --------->AHL20(2)                        ----------->GT1                  ---------->DOF2              <---------AHL20(2)                        <------MYB83                <------------CBF             --------->YAB1            <---------AHL20(2)                         --------->AHL20(2)             <---------AHL20(2)     --------->ARR11(3) --------->MYB59            <---------AHL20(1)             --------->AHL20(2)     <---------ARR11(3) --------->MYB46(2)         --------->AHL20(1)     <---------ANAC58     <------MYB46(1)     ---------->DOF2                     <---------AHL20(2)     <---------ANAC58     <------MYB83 --------->AHL20(2)                   --------->YAB1     <---------ANAC46    --------->MYB59    --------->YAB1   <------------CBF --------->ICU4       <-   cacattttcgtgtaattaaaatttaatttggttccaaagattttaatcaaaagaagtttggtaaattgaaacaggcagacataatttattgtaaagagtt  16308800                      <----------DOF2                      <---------WOX13(1)                <---------bZIP60(2)                <---------ANAC58                                   <-----------GT1                <---------ANAC58                                 <-----------GT1             ----------->HVH21                              <---------RVE1(1)             ----------->TGA1                              --------->ARR11(3)           --------->YAB1                                  <---------GLK1(2)           <---------ICU4       <----------DOF2        <---------MYB52(1)       <---------AHL20(2)       <---------DAG2        --------->TOE2(3)   <---------AHL20(2)<---------ANAC58               <---------TOE2(2)   --------->AHL20(2)<---------ANAC46               <---------TOE1(2) <----------DOF2          ------  <---------AHL20(2) <---------ANAC58              ------>ZmHOX2a(1)  <---------DAG2        <-------- --------AHL20(2)   <---------MYB46(3)    <-----------GT1  <---------ARR11(3)              --------->ICU4   tttatttatttattcatgacgttgcttgatggtgctttaccaattttcttctcctacgttagatttttttcacttttttttttggtgtttgtaataaatg  16308900                                                                             --------->TGA1a                                                                             <---------O2                                                                             <---------TGA1a                                                                             <---------ANAC58                                                         <---------YAB1      <---------ANAC58 <------                                            --------->DAG2                   ----------->GT1  <------                                           ============================================bZIP_DOF                                           ---------->DOF2--------->YAB1     --------->O2  <---------AHL20(2)                                          <---------AHL20(2)                 <---------ANAC55(2)                                      --------------->AGL15                  <---------ANAC46<-------                                      <---------------AGL15                 <-----------------------TaNAC69(2)         ----------->GT1             <-----------------AGL3         <---------AHL20(2)    --------->YAB1       ------->TEIL                  <-----------------AGL2      ----------->GT1     ----------->GT1 ----->GT1            ---------->DOF2----------------->AGL3    ========================bZIP_DOF -AHL20(2)         --------->TOE2(3) ----------------->AGL2    ---------->DOF2 ----------->HVH21   tgaaaaatggaccgtttaaaaacttaaagacgtttgattactatataaagtaattgtttataatagaaagttaattgagacgtgaaatggtataatatta  16309000                     --------->At4g35610                     <---------At4g35610                 --------->ANAC46                 --------->ANAC58                 --------->ANAC55(2)                 --------->ANAC55(1)                 <---------O2                       <---------ANAC46                 --------->ANAC58                   <---------ANAC58              <---------REM1(2)                     <---------ANAC58            <---------ZAT18               --------->PCF2 <---------ANAC46           <---------ANAC58               --------->PCF5 <---------ANAC58           <---------ANAC58               --------->TCP11(2)  ----------->HVH21 ------->TEIL          --------->TCP16(1) ---YAB1<---------MYB52(1)               <---------TCP16(2)      <-----------------AGL2 ---AHL20(2)--------->ZAT14             <---------ZAT18  <---------ANAC58        ---------->DOF2 --AHL20(1)<---------ANAC46             --------->ZAT18<---------WRKY18(1)     <---------YAB1   ttgtgtaacagttgtgtacacgtagctctcatgcagttttagtggacccatatggcttgacttgtattctgtttttgggctattaaagtccaaaacagag  16309100                                                                                          <---------ATHB12                                                                   <---------AHL20(2)     --------->MYB46(3)                ------>ZmHOX2a(1)                      ------>ZmHOX2a(1)             --------->ANAC58       --------->ANAC58                          <-------MYC3     <---------AHL20(2) --------->ANAC46       --------->ANAC58                          ------->MYC3     --------->AHL20(2) --------->ANAC58   acccctctcaagcccttcctattaatccatctagctaatagaaactataaacgtgtcctctctctcaattaaataagctagaaacatactcaaccattcg  16309200  Previous    Next  AGI:  At4g34040.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G15530.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G15530.3); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G15530.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47833.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 16304285    to: 16308684    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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