Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------TOE2(3)                  --------->ARR14(2)                  --------->AGP1                  <---------AGP1                  <---------ARR14(2)                  --------->ARR11(3)     --------->LBD16         ---------->DOF2    --------->ANAC46      <----------DOF2   <---------LBD16<-----------ARR10--------->MYB59                                                  - <---------ARR14(2) ------>ZmHOX2a(2) --------->PCF2                   --------->ZAT14             -- --------->ARR14(2)<------ZmHOX2a(2) <-----------HVH21                 <---------ZAT14       <------ZmHOX2a(1) ------------->AGL1--------->CCA1(2)<------MYB46(1)            >>>>>>>>>TBF1             --------->TOE1(2) ------GT1        <---------ARR11(3)<------MYB83            <-----------------------TaNAC69(2)   ----   ccatacccggagacatggaagatctaagctttaaagttcggtccctccttgttgtccctagtgaagaagaaactacagagactgaagaaaaactaggagc  16300800                                                                                   --------->ARR14(2)                                                                                   --------->ARR11(3)                                                                                  <---------KAN4(1)                                                                                  <---------GLK1(1)                                                                     --------->YAB1<---------ARR11(3)                                                                     --------->ATHB12   ---------->DOF2                                                                     -------->ATHB1<---------ARR14(2)                                     <---------WRKY18(1)            <---------YAB1--------->KAN4(1)                             --------->CCA1(2)<XXXXXXXXXXXXXXXXXXXXMIR397A        --------->GLK1(1)               --------->ANAC58--------->ANAC58            <---------------------WRI1  ------>ZmHOX2a(1) ------>GAMYB  --------->ANAC58--------->ANAC58            --------->At4g35610   <---------KAN4(2)  > ------->MYB46(3)          --------->CCA1(2)  ---------->DOF2       <---------ATHB12  --------->TOE2(3) ------->RAV1(1) --------->MYB46(3) --------->WRKY38(1)    <---------At4g35610   ---------->TaMYB80--   aacagtcatcgagacacaacccatcgaagagataagccttgactccatcaaagttggactcagcgaagctatcattgaaatcgaatatcctaaagacccc  16300900                                  --------->RAP2.3(2)                                  --------->DEAR3(1)                                 --------->RAP2.3(1)                                 <------NtERF2         <---------ANAC58                                ------>NtERF2          --------->ANAC55(2)                                --------->LBD16        <---------ANAC55(1)                               --------->ANAC46        <---------ANAC58                       --------->YAB1                  <---------ANAC46  <---------YAB1--------->ZAT2<---------LBD16      <---------At4g35610                   ----------->GT1 <---------TOE2(3)    <---------YAB1               <-------GAMYB                <---------HSFB2a(2) >>>>>>>>WRKY18 <---------At4g35610        *TSS    --------->At4g35610          --------->HSFB2a(2) < ------->WRKY12 --------->At4g35610------>NtERF2  --------->MYB52(2)   --------->ZAT14---------->DOF2   attgacgatagctaatgcagcagtctgataatcccgccgctagacggagagtgagttgcgtcttatctactagtatacacttcttgaagaaagctaaaaa  16301000                          <---------WOX13(1)                         <------------CBF                        --------->ATHB12                      <----------DOF2                     <---------ANAC58                                                <----------DOF2          <---------MYB52(1)    ---------->DOF2                                     <---------ANAC58     <---------CCA1(2)<---------WOX13(1)      <-----------GT1                     <-----------GT1    <---------SPL7   <---------ANAC58      --------->AHL20(2)                <---------AHL20(2)  <------NtERF2  <------------CBF--------->DAG2   ------>ZmHOX2a(1) ----------->GT1 <---------ANAC58 ---------DEAR3(1)   <---------ANAC46 ------------>CBF <---------DAG2  <-----------GT1            <--   cgtcgtcgtatcgttgtcttattgcttgattggataaagcttcaattttttcctccaatttttgtcgaaaatgtaacattttttttgctttccactgtga  16301100            --------->GLK1(2)           --------->ARR14(2)                                                         ------>ZmHOX2a(1)           <---------GLK1(2)                                                        *TSS         --------->ANAC58                                    <---------YAB1     <-----------ARR10         --------->ANAC58                           <---------AHL20(2)         <---------CCA1(2)       --------->ANAC46                             --------->AHL20(2)      <---------At4g35610     <---------ALFIN1      <----------ID1          --------->YAB1      <---------ANAC58        <----- <-----------HVH21     --------->CCA1(2)          <---------------AGL15--------------------->WRI1  << ----------CBF    ---------->DOF2------->TEIL     ----------->TBP      <---------ANAC58 <----------DOF2   gattgtcacacacgattctctaaagaaatgagacgaattttgaaaacgatttataaaaatagtatttttgtttccttgagcttatctcctcttttctctt  16301200                       <---------ATHB12                      --------->ANAC58       --------->CCA1(2)      --------->ARR11(3)            --------->YAB1--------->AHL20(2)                          -------      <---------ARR11(3)         --------->WOX13(1)                                           ------- -----DOF2            --------->ANAC58  <---------ZAT14                         <---------HSFB2a(2) <<<<<<<<MYB80       --------->WOX13(1) --------->ZAT14     <----------DOF2     --------->HSFB2a(2)   tggtttgagatatgaattacagacaatcaagtagtcagtcacaacagtgtgtataaatatgtcttttaagtgaaatcggtttcgagagacagtgagacga  16301300                                                                               --------->ARR14(2)                                                                              <------ZmHOX2a(1)                                                                       ----------->HVH21                                                                       <---------ETT(1)                                                                      ===============================                                                                      ------>ZmHOX2a(2)                                                                      ===============HOX2a_HOX2a                                                                      --------->DEAR3(2)                                                                     <------ZmHOX2a(2)                                                                     ================HOX2a_HOX2a                                                                    <---------ARR14(2)                                                                    <-----------ARR10                                                                    --------->ARR14(2)              -                                                                   <------NtERF2                    <                                           --------->At4g35610     --------->ATERF1(1)          -----                                          <---------ARR11(3)      <---------MYB46(3) --------->GLK1(2)        --------->ARR11(3)                --------->ARR11(3)     <---------ANAC58   <---------ARR14(2)       <------ZmHOX2a(1)              ---------->DOF2            <---------ANAC46   --------->ARR14(2)     <---------TOE1(3)          <---------At4g35610              <---------ANAC58   <---------GLK1(2)     <---------TOE2(3)          --------->At4g35610             <XXXXXXXXXXXXXXXXXXXXMIR842     <---- -->ANAC58                      <---------ZAT2                  <---------LBD16<---------ARR14(2)<--- -->ANAC58   <---------LBD16    --------->ZAT2           <<<<<<<<<<<<<<<<<LFY =======================   aaatgttaaggattttggggagaagagttgtttcagcttcgaaagagcttactagtattcaacaatggcggatccgaccaggaaccgattctcgtcccga  16301400             <---------LBD16             <---------ANAC46            <---------LBD16         <----------DOF2        --------->HSFC1(2)        <---------HSFC1(2)        --------->HSFB2a(1)        <---------HSFB2a(1)                        ----------->HVH21   --------->HSFB2a(2)                --------->ALFIN1      --------->ETT(2) ======HOX2a_HOX2a                  <---------ANAC58        <---------ETT(2) ----->ZmHOX2a(1)                   <---------ANAC58 --------->SPL7 ----------DOF2         ---------->DOF2         <---------At5g28300                             ----- ---->ARR14(2)   ------>NtERF2      <---------ANAC46--------->MYB52(1)                          ----- -----ARR14(2)--------->LBD16  --------->ARR14(2)  <---------SPL7                   --------->HSFB2a(2) ---ZmHOX2a(2)<---------LBD16  <---------ARR14(2)<---------LBD16                    <---------HSFB2a(2) ===HOX2a_HOX2a--------->LBD16<---------GLK1(1)<-----------GT1                <----------DOF2   -----   tccttttcgaactttccggggactacaaaagggtttctgcgtgggcattttaccggacggagtcgacagaaattcggaggctttttctagcaattcgatc  16301500                       <-------TEIL                    <---------ZAT2                    --------->HSFC1(2)                    <---------HSFC1(2)                    <---------HSFB2a(1)           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         <---------ARR11(3)                   --------->ANAC58         --------->ARR11(3)                   --------->ANAC58                                -------         --------->ARR14(2)                 ---------->DOF2                          --------->At4g35610         <---------ARR14(2)     <---------CCA1(2)                              <---------ANAC58 --------->AtLEC2   --------->At4g35610  ----------->GT1                 <---------YAB1     --------- ->ZmHOX2a(2)       --------->HSFB2a(1) --------->DAG2                   --------->ICU4   <---------WOX13(1) ---->ANAC58        --------->ZAT2    ---------->DOF2           <---------WOX13(1)   <---------At4g35610 ---->ANAC58        <---------At4g35610--------->DAG2         --------->ATHB12 <---------ANAC58   gccatggaagggatcttatcggagcttcgttcccatatcaaaaaggtaaagccatctcatttatcgattgatgtcttaattgtttgcagatgaatgatat  16301600                                            <------ZmHOX2a(1)                                  <---------DEAR3(1)                                --------->LBD16               <---------ARR14(2) --------->ALFIN1   --------->ARR14(2) <------MYB46(1)--------->ALFIN1                                             ---   ------->TEIL--------->ARR14(2)<------NtERF2   <---------MYB46(3)                             <----   <---------ARR14(2) <------MYB83<---------AtMYB61                           <----------DOF2 =======  <---------CCA1(2)  <---------TOE1(2)  <---------ANAC46  <------ZmHOX2a(1)--------->ANAC58   <------ZmHOX2a(1) -->CCA1(2)  ----------->ARR10  <------NtERF2    ----------->GT1  --------->At4g35610     ---------->DOF2 >YAB1    --------->ALFIN1    <---------LBD16 ------------>MYB.PH3(1)      --------->ANAC58   =======   aagtgtatctcggtggagatttgtaggtattggccggaggtggagaggaagcggttaagaggaacagaagcagaaacaagcttttgcctagagaaaggat  16301700  Previous    Next  AGI:  At4g34020.1    Description:  DJ-1 family protein. similar to DJ-1 family protein [Arabidopsis thaliana] (TAIR:AT1G53280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47821.1); contains InterPro domain DJ-1 (InterPro:IPR006287); contains InterPro domain ThiJ/PfpI (InterPro:IPR002818) Range:  from: 16298267    to: 16300943    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g34030.1    Description:  MCCB (3-METHYLCROTONYL-COA CARBOXYLASE); biotin carboxylase. Identical to Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor (MCCB) [Arabidopsis Thaliana] (GB:Q9LDD8;GB:O49501;GB:Q94F35); similar to putative methylcrotonyl-CoA carboxylase beta chain, mitochondrial precursor [Oryza sativa (japonica cultivar-group)] (GB:BAC99804.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64992.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47822.1); contains InterPro domain Acetyl-coenzyme A carboxyltransferase, C-terminal; (InterPro:IPR011763); contains InterPro domain Acetyl-coenzyme A carboxyltransferase, N- Range:  from: 16301184    to: 16304104    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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