Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------RVE1(1)                      --------->ARR11(3)                      <---------GLK1(2)                                                            --                  <---------MYB52(1)                                                              <--                 <-----------HVH21                             --------->YAB1                   -----                --------->DEAR3(1)                         <------ZmHOX2a(1)                <-------- -----DOF2      --------->DREB2C(2)                  ---------->DOF2                  --------->TOE2(3) ---DAG2     <---------ALFIN1                   --------->AHL20(2)             <-----------GT1 ------   ttcaatttcaattctccaccgtcagattttttaaaaaacacaaatactaagaaaataaagaggaatcagaaaattcaaaattcacataccttgatcaacg  16288500                                                                                              -------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            ---------                                                                                          <------NtERF2                                                                                          --------->ATERF1(1)                                                                                          --------->RAP2.3(1)                                                                                         <---------RAP2.3(1)                                                                                         <---------ORA47(2)                                                                                         <---------RRTF1(1)                                                                                        <---------ATERF1(2)                                                                                        <---------RRTF1(2)                                                                --------->GLK1(2)       <---------RAP2.3(3)                                                                <---------ARR14(2)      <---------DEAR3(1)                                                           ----------->HVH21            --------->ANAC46                                                --------->CCA1(2)                       <---------RRTF1(3)                                               <----------ID1   --------->ARR14(2)      <---------RAP2.3(2) ---->ZmHOX2a(2)                      <---------ETT(2)   <---------ANAC58              --------->RAP2.6(3) ----ZmHOX2a(2)               <---------At4g35610        --------->ANAC55(2)         ----------->HVH21 -->GAMYB                  ------>MYB83  --------->ANAC46<---------ANAC55(2)  ----------->GT1<------NtERF2 -WRKY38(1)                ------>MYB46(1) ---------->DOF2--------->LBD16 <---------ZAT14<---------ERF1 --->MYB46(3)         <-----------GT1<------ZmHOX2a(2)   <---------ANAC58 --------->ZAT14------>NtERF2   atcgtcgtgctggaattgctgttttcaccttccgatgcgatcgacgaaagagacgaagtccgtgacaatctgctactatactgtttattgacggcgcagt  16288600                                                                                                    -                                                                                                    -                                    ------>ZmHOX2a(2)                                               -                                   <------ZmHOX2a(2)                                                <                                  <-----------ARR10                                                 <                                  <---------AGP1            <---------ARR14(2)                      <                                  <---------ARR14(2)        --------->ARR14(2)                      -                                  --------->ARR14(2) --------->LBD16             ------->TEIL       <                                 <---------CCA1(2) <---------LBD16             <-------TEIL        <-                   --------->ARR14(2)            --------->ARR14(2)     --------->ZAT2           ---- ---->GT1          <---------ARR14(2)            --------->GLK1(2)<---------ARR14(2)             <--- -ZAT18 --------->At4g35610   <---------LBD16    <---------ARR14(2)     <---------ZAT2           ---- >ZAT14 --------->ZAT2 --------->LBD16    <-----------RAV1(2)     --------->ARR14(2)      <---------At4g35610   ataaaccaagagctggaagagtttccgagagcctcggatctaaatcaggcgaatccggctcgaatccaaatccaagctcgatgcatcccttgagctcttc  16288700                                                <---------ANAC58           <---------MYB52(1)                   <---------ANAC58                             --------           ----------->HVH21                 <---------WOX13(1)                              --------          <-----------HVH21                -------->ATHB1                                    --------         --------->ANAC46                  --------->YAB1                                   <--------        --------->SPL7                     <---------ICU4                                  <---------At4g35610  ------>ZmHOX2a(2)                        --------->ATHB12                                --------->At4g35610 <------ZmHOX2a(2)                         <------------ATHB5                              --------->LBD16 -------->ARR11(3)                        --------->ICU4                                  <---------MYB46(3) -------->ARR14(2)                        <---------ATHB12                             <---------SPL7 -------->ARR14(3)                    ------------------>ATHB9                     ------>ZmHOX2a(2) ---------ARR14(3)                  <------NtERF2                                 <------ZmHOX2a(2) ---------ARR11(3)                 <---------DEAR3(2)                            <---------ARR14(2) ---------ARR14(2)                <---------DEAR3(1)                             --------->ARR14(2) -------->AGP1--------->ANAC58   --------->RAP2.6(3)                          --------->HSFB2a(2) ---------AGP1--------->ANAC58  <-----------HVH21                     --------->HSFC1(2) <-----------RAV1(2) --------CCA1(2)          ------>NtERF2------------>ATHB5             <---------HSFC1(2) --------->SPL7 ----->HSFB2a(2)         ----------->HVH21<---------ATHB51           --------->ANAC58  <-----------HVH21 ------HSFB2a(2)         --------->DEAR3(1)<--------ATHB1            --------->ANAC58--------->LBD16 ----->HSFC1(1)          <---------ETT(1) <---------YAB1  <----------DOF2     <---------HSFB2a(2)  <-   tagatcttcgtccgtcacgctcttactccgaccgagtcggcccaatgattgcttccccttctttcgaagccaagcttcttctcgatccgcgtccggtgac  16288800                                            <----------DOF2                               <---------ANAC58                               <---------ANAC58                               <---------ANAC46                              <---------MYB46(3)                             --------->ALFIN1         <-----------GT1                            <------NtERF2  <------NtERF2     <---------TOE2(3)  ------->TEIL             <---------ORA47(2)   <---------ANAC58 ->WRKY38(1)               <---------DEAR4(2)   <---------ANAC58 ->WRKY12                 <---------DEAR3(1)<-------GAMYB    <---------TOE1(3) --->HVH21          --------->WRKY18(1)   ------>NtERF2      <---------YAB1 -MYB52(1) <-----------GT1<---------DREB2C(2)   <---------ANAC46<---------ANAC46                 <--- --------YAB1  --------->MYB52(1)        <---------ANAC46 --------->ICU4     ----------->GT1  <------   catgaatgttgttttactagcggtctaggcggtgcttgaaacggcgcgttgcgttttgacattatggtttgtgtttgtggagttaatcgctcttccttcg  16288900                                                         --------->ANAC58                                                         <---------ANAC55(2)                                                         --------->ANAC55(1)                                                 <-----------TBP                                            --------->GLK1(2)                                            --------->ARR14(2)                                            ------->TEIL --------->ANAC55(2)   --------------->AGL15                                            <---------ARR11(1)              --------->YAB1                                            <---------ARR14(2)         ------------>CBF  --------->AHL20(2)                                   --------->ZAT18       --------->ANAC46  <---------ATHB12        --                                   <---------ZAT18       --------->ANAC58  --------->MYB46(3)     ---                              --------->REM1(2)  --------->AHL20(2) <-----------GT1   ----------->GT1      <---------AHL20(2)   <---------ANAC55(2) <----------DOF2 --------->AHL20(2)     --------->TOE2(3) ------MYB52(1)            <---------ANAC46<---------CCA1(2)------->TEIL --------->WOX13(1)     <---- ---TOE1(2)       *TSS     >>>>>>>>CAMTA3  <---------ARR14(1)  <---------AHL20(2)    ----------->GT1   tttgtgttttaatttcatactaaaaaaacgcgtgaagagcacttcgaatctttatatacacgtatttaatttactcaatcaccaaaaatgttaaaattct  16289000                                                                               --------->CCA1(2)                                                                              <---------ARR11(3)   --------->ZAT18                     <-----------GT1                        --------->ARR11(3)   <---------ZAT18                 <----------DOF2                   ------->MYC2                 --- ------->DAG2                  <---------GLK1(1)                     ------->MYC3                <--- ------->DOF2         --------->ARR14(2)  <----------DOF2            <-------MYC2             <------ -----HSFB2a(2) <-----------GT1--------->GLK1(1)                     <-------MYC3   <-----------GT1 <   aaaagtgccctaaactttataccatattttcagatttcttttaacttttagtttgactaaaattgttagcatgtgtttgagatatataactattttttaa  16289100                                               <----------DOF2                                              <---------DAG2                                           <-----------GT1                                        --------------->AtSPL8                                  <----                                       --------->AHL20(2)                                      ------           --------->KAN4(2)          <---------YAB1           --------->ANAC58                <-----         <---------KAN4(2)          --------->YAB1             --------->ANAC58              <-------     ----------->GT1                -------->ATHB1          <---------MYB52(2)               -------- ------>YAB1                        <--------HAHB4     --------->ANAC58                     --------- ------ATHB12     --------->LBD16   --------->ATHB51   --------->ANAC58              <---------At4g35610 ---AHL20(2)    <---------LBD16     <---------ICU4     --------->ANAC46              --------->At4g35610 ---------YAB1<-----------GT1      --------->ICU4  <-----------GT1         <-----------GT1  <--------   tcataaatgggaatatttccctgatatttgaatttgaattattatttacctttttaccagcaacgaagcaatacattttacttagttagatgtcatcatg  16289200                         --------->AHL20(2)                         <---------AHL20(2)              <---------YAB1    ----------->GT1      --------->YAB1            <---------AHL20(2) -----ICU4         <-----------GT1                --------->AHL20(1) --->ICU4       ----------->GT1                   <---------AHL20(1) ----YAB1   <---------AHL20(2)                  --------->AHL20(1)                         ------>MYB46(1) --ICU4    --------->AHL20(1)                   <---------AHL20(1)                         ------>MYB83 ->YAB1    <---------AHL20(2)            --------->HSFB2a(2)                             <---------MYB59 >ICU4     <---------AHL20(1)            <---------HSFB2a(2)                          <------ZmHOX2a(1) -YAB1     --------->AHL20(2)  <-----------GT1 --------->AHL20(2)            ---------->DOF2  -------   atgtctaggtaaataaaattgttacatttatattcactaacttctgcaaatatatatttatgctaaaacagaagaaataaaaagatgaggaccaaatcag  16289300                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                                <-----------RAV1(2)                                                                               --------->At4g35610                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              ----------->RAV1(1)                                                                             --------->ANAC46                                                                            --------->At4g35610                                                                          -------->ZAP1                                       <---------ICU4                   <---------WRKY18(1)                                  <---------AHL20(2)                   ----------->HVH21                                  --------->AHL20(2)                   --------->WRKY12                        --------->AHL20(2)                             --------->WRKY38(1)                        <---------AHL20(2)                             --------->WRKY45             <---------ANAC46     --------->AHL20(1)                  --------->DOF5.7(2)          --------->GLK1(2)    --------->YAB1                    <---------bZIP60(1)                -         <---------ARR14(2)  --------->AHL20(2)                  --------->bZIP60(1)   ----------->GT1         --------->ARR14(2)  <---------AHL20(2)             ----------->GT1 <---------LBD16         < -->YAB1 <---------GLK1(2)  --------->YAB1             --------->AHL20(2)<---------At5g28300---------   aaacattcacagattctgtgtatcaatttataaaaataaaatacttacatagtagaatcaaatagtgacatcgttgaccgcggcagaagaagtaaaaatg  16289400  Previous    Next  AGI:  At4g33985.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G15590.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71847.1); contains InterPro domain Protein of unknown function DUF1685 (InterPro:IPR012881) Range:  from: 16288117    to: 16288918    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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