Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------YAB1                        <---------YAB1                              --------->YAB1                       <---------RVE1(1)                       >>>>>>>>>RAP2.2     <---------MYB52(2)     <---------ARR11(3)                     <---------ARR11(3)   --------->ANAC58        <---------GLK1(2)                --                     --------->ARR11(3)   --------->ANAC58        --------->ARR11(3)               <-                    --------->CCA1(1)     --------->ANAC46       <---------RVE1(1)             <-----     <----------DOF2--------->RVE1(1)     ------------------------>ANAC81            --------->ANAC58 ---------DOF2<---------ANAC55(2) --------->ARR14(2)        ---------->DOF2          --------->ANAC58 ---DOF2      <---------YAB1  <-----------GT1------------------------>ANAC81         --------->ANAC46   actttgcctttggattacgaaaatatctaaaatcacgattcgacaaggaaccaaaaaaaaaaaaaagagatttttattctctcatacacgaatcaagttc  16284700                                                                               --------->CCA1(2)                                                                              --------->ARR11(3)              ------>ZmHOX2a(1)                                               <---------ARR11(3)         --------->GLK1(1)                                                    --------->ARR14(2)         --------->HSFB2a(1)                                                  <---------ARR14(2)        <---------ARR14(2)                                                   <---------HSFB2a(1)        --------->GLK1(2)                                           <---------ANAC46        --------->ARR14(2)                                          <---------ANAC58     <-----------GT1 ------->ARR14(2)                                        --------->AHL20(2) ----------->ARR10 --------ARR14(2)                                   --------->At5g28300   <------ZmHOX2a(1) --TEIL ------->TEIL                               ----------->GT1  <---------ANAC58  <---------YAB1   atattcgacgaatctcctacatatcgaaccaaaaaaaactatcaaacgagacatggtaaataaacaaattgcgagaggaagatttgatatgataccagtt  16284800                                                                                            ---------                                                                                           --------->ANAC46                                                                                        --------->DEAR3(1)                                                                                       --------->ATERF1(1)                                                                                      <---------ATERF1(1)                                                                                      ------>NtERF2                                                                                     --------->ANAC58                                                                                     --------->ANAC46                                       <---------ARR14(2)                            --------->DEAR3(1)                                       --------->ARR14(2)                            --------->ANAC58                                     --------->LBD16                                --------->ATERF1(1)                                   <---------LBD16                                  <------NtERF2                                  --------->MYB52(1)                               ------>NtERF2                                 <---------ALFIN1                                  <---------ATERF1(1)                               --------->SPL7                                     --------->DEAR3(1)                              ----------->HVH21                                   ------->GAMYB<-----                             --------->At5g28300                                  ----------->HVH21                             <---------RAP2.6(3)                                 --------->MYB46(3)                            --------->RAP2.6(2)                                  --------->DEAR3(2)                          <---------At4g35610                                   --------->At4g35610        --------->At4g35610 --------->ANAC46                                    <---------At4g35610     --------->At4g35610  --------->At4g35610                <---------ZAT18 <-------TEIL------>NtERF2   --------->YAB1       <-----------RAV1(2)                  --------->ZAT18--------->GLK1(2)  ------   tggaatcagcatcagaacgagaggtctcagccgtaacaccggaatcgagcgagttcgaaagagtcgactcgctctgagattcagccgacgcctccgaaac  16284900                                      --------->YAB1     <---------HSFC1(2)               -------->ATHB1     --------->HSFB2a(1)             --------->ICU4     --------->HSFC1(2)              <---------ATHB12             <---------LBD16    <------ZmHOX2a(2)              --------->WOX13(1)          ------>ZmHOX2a(1)   <---------ARR14(2)            <---------ZAT18              <---------ALFIN1     --------->ARR14(2)   --------->ARR14(2)            --------->ZAT14            ------>ZmHOX2a(1)  ---------->DOF2 >LBD16------>ZmHOX2a(1)   <-----------GT1           <---------ANAC58    <----------DOF2     <------- ----HSFC1(2)           --------->YAB1<---------ICU4 <---------ANAC58<---------MYB52(1)  <-----------HVH21 --->HSFC1(2)--------->LBD16<---------At5g28300   <---------MYB52(1)--------->LBD16<---------ARR14(2)   atcgcgatccttctccagagagacaatattcaccgtgcaatcattctccatcgttgcttctcctcctctccggtgctttagaaaagaactgcgtcgtctc  16285000                                                                                           ==========                                                                                           ----------                                                                                     <----------ID1                                                                                     ----------->GT1                                                                                    -----------------                              <----------ID1                                        ----------->GT1         <---------AHL20(2) ---------->DOF2                                       ---------->DOF2        --------->YAB1    ---------->DOF2     <----------DOF2                 -----------------------   <------ZmHOX2a(1)   <---------------------WRI1              *TSS        <------ZmHOX2a(1) --CCA1(2)          <<<<<<<<<TBF1 ---------->DOF2           <------ZmHOX2a(1)--------->At4g35610   <-   tcttaggaaataaaaatggttcttcttcgaaagagccaaagaagagagctttaagagagagaggaatgagagaagaaggagatgaaaaggaaaaaaagag  16285100                                -------->ABF1                                ------->MYC4                                <-------MYC2                                <-------MYC3                                ------->MYC3                                ------->MYC2                                <-------MYC4                               <---------O2           <---------At4g35610                               --------->O2           ----------->RAV1(2)                        ===================================bZIP_DOF                        =================bZIP_DOF     --------->At4g35610                        <---------DAG2           --------->ANAC58                  <---------DEAR3(1)             --------->bZIP60(1)                  <---------bZIP60(2)            <---------ANAC55(2)                  <---------ANAC46               <---------TGA1a                  <---------ANAC58               --------->ANAC46                  <---------bZIP60(1)            <---------O2                ------>NtERF2                  <---------ANAC58               <---------bZIP60(1)         ----------->RAV1(1)              ------->MYC3     --------->TGA1a   --------->ANAC55(2)        --------->ANAC46              <-------MYC3     <---------TGA1a   --------->ANAC58           ----------->HVH21             --------->O2      --------->ANAC55(2)<-----------HVH21         <---------ETT(1)           <---------ALFIN1    <---------ANAC55(2)<-----------TGA1     --------->ARR11(3)         <--    ---------->DOF2 <------NtERF2 <-----------HVH21--------->TGA2(2)   <---------ARR11(3)     <------    =====================================bZIP_DOF--------->bZIP60(2)  --------->RVE1(1)       <------ ========================================bZIP_DOF--------->O2       --------->YAB1           -------- >DOF2--------->DAG2--------->ATERF1(1)          --------->TGA1a    <---------ICU4           <------- ------->ANAC81   --------->bZIP60(1)           <-----------bZIP910(1)--------->CCA1(1)      -------- ->ANAC81 <-------TEIL  <----------DOF2   <------------CBF          --------->AHL20(2)       <------- ---------ID1<---------O2      --------->ANAC46 <-----------STF1 --------->YAB1        --------->ANAC46   agagacaaaaggtccacatggcgtcgcttttacacgtgtcatagtattgccacgtcatctgggtcgctaataatatctccgacaaatatcagccagatat  16285200                                                     <----------DOF2                                                  <---------ARR11(3)                                                  --------->ARR11(3)        <---------At4g35610          --------->YAB1 ------>ZmHOX2a(2)        --------->At4g35610  ----------->GT1  <---------ICU4 -------AHL20(2)             <---------ZAT6 <---------AHL20(2) ---RVE1(1)                  <---------ANAC46 --------->YAB1 ---CCA1(1)              <-------GAMYB--------->AHL20(2) ->ARR14(2)             <------MYB46(1)    --------->YAB1                             --------->MYB52(1) --ARR14(2)             <---------MYB46(3)--------->AHL20(2)                        --------->ARR11(3) ->ARR11(3)             <------MYB83--------->AHL20(2)                  <---------At4g35610 --ARR11(3)            <---------AtMYB61--------->YAB1    <----------DOF2 <---------YAB1         <---   ttttttttggagctcaaggagaagggaggttgtgttaaataaaaataaaaatgatcttttcttttgtcaacttctgatgatatatagataatggatgctc  16285300                                              <---------MYB52(1)     <---------RVE1(1)            <--                            <----------DOF2   ---------->ID1        --------->ARR11(3)     <------ZmHOX2a(2)                          ---------->ID1     <-------GAMYB          <---------ARR11(3)    --------->ARR11(3)          <--------P  <---------ANAC58 <---------ICU4               <---------GLK1(2)     <---------ARR11(3)  <---------AHL20(2)  <---------ANAC58 --------->ATHB51      <---------ANAC58           <---------YAB1 <---------AHL20(2)   <---------ANAC46<---------YAB1         <---------ANAC46     --------->AHL20(2) -------DOF2    <---------AtMYB61     --------->ICU4         <---------ANAC58  ----------->GT1 ------   ttttttattttggtagttttggtttcttgtcttttatgtcattatttcgttgttttttttttgacttgtagattttttataagttaaattaagatcagat  16285400                                      <---------AHL20(1)                                      --------->AHL20(1)           <----------DOF2            <---------ARR11(3)      ------>NtERF2                   --------->ARR11(3)                      <---------ANAC46  --------->ANAC46                  ------->TEIL                              <---------ANAC58      <  <---------O2                 <---------ANAC55(2)                         --------->ARR14(2)       < ---------GT1             --------->YAB1       ---------->ID1    ---------->DOF2                   <- --->ARR14(2)            <---------YAB1  <---------AHL20(2)  ---------->DOF2  <---------ANAC58     --   ttacacgaggcctctttagcaagtggtatgatcacatgaatatttttttgttttttttttttgtaaagaaagaccagaattcgtgtgagcctctctaggg  16285500                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                                                            <---------AHL20(2)                                                                    <-----------GT1        <---------MYB46(3)              --------->HSFC1(1)                                 ----------->GT1          <---------WOX13(1)              <---------HSFB2a(2)                            --------->ARR14(2)         --------->ATHB12 ------MYB83  <---------HSFC1(1)                             <---------ARR14(2)        --------->ICU4 ------MYB46(1)                           <------ZmHOX2a(2)  <---------GLK1(2)   ---------->DOF2 --------AtMYB61      <-------TEIL    <---------WOX13(1)  --------->ANAC55(2)  <---------YAB1   <---- ------->MYB59--------->HSFB2a(2)   --------->ATHB12     <---------LBD16   --------->AHL20(2)   <----   tttggtcttacattttctagaatatacatatatatggatgatggatcaaattggcttcatacggattttgtaacaaattttattaaagaatgatggatgc  16285600  Previous    Next  AGI:  At4g33980.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64989.1) Range:  from: 16282801    to: 16285063    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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