Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------ANAC55(2)                                                                                          --------->ANAC55(1)                                                                                          --------->ANAC58                                             --------->DAG2                               --------->ANAC46                                         <---------ICU4                                   --------->ANAC55(2)                                         --------->YAB1                            --------->TOE2(3)                                        <---------YAB1                           <---------TOE2(3)                   -------->P           --------->ICU4 --------->KAN4(1)  ----------->GT1 --------->ANAC58                <---------ANAC58  ------>NtERF2        <---------KAN4(1) --------->DAG2   -----------                <---------ANAC58 <---------ANAC46    <---------GLK1(2)  ---------->DOF2<---------REM1(2)    --------->MYB52(1)     <-----------RAV1(1) ----------->HVH21     --------->LBD16--------->DOF5.7(2)  --------->MYB46(3) --------->TOE2(3)  <---------ATHB12        <---------ALFIN1<---------DOF5.7(2)   ctgaacgaacagagcattgcttacctctattgttgccgagtaatcataagggacggattgttcttcacaccctgaaaagtgtaaacgtttacacgtaaaa  16225800                         ------>NtERF2                        ------>NtERF2                       --------->ANAC46                                                      <-------                       --------->LBD16                                  <---------ZAT18      <-------                       --------->DEAR3(1)                   --------->DAG2                --------->AHL20(2)                      <---------LBD16                  <-------TEIL<---------ANAC58   ----------->GT1                <----------DOF2                       --------->CCA1(2) --------->ZAT18----------->GT1          <---------GLK1(2)  <-------GAMYB       ---------->DOF2   <---------ANAC58 ---------->DOF2-- >GT1--------->TOE2(3)--------->LBD16   --------->MYB52(1) ---------->DOF2   --------->MYB52(1)  <---   aaaaaaacattagaatttcttttccccggcccgttgaaaatataacagagaaaaagattcaaaaagttttcttgtggactaacagaaaaagataaattat  16225900                                    --------->TOE2(2)                                  >>>>>>>>>MYB98 --AHL20(2)             --------->ANAC46                         <---------ICU4 --ATHB51               --------->ANAC58                    --------->AHL20(2)                 ------ --------->GT1 <---------DAG2 <----------DOF2               <---------AHL20(2)               -------- ------LBD16<<<<<<<ZML2 --------->ANAC58            ----------->GT1<---------YAB1--------->AHL20(2)   ggggaaaataactagaaccttttctcaagacactttaacatatgaacaagaatatagtaaaataaaatcattttagacaaaaaaaaaatcgtttatcaaa  16226000                            <---------TOE1(2)                            <---------TOE2(2)                                   ----------->RAV1(1)                         --------->ATHB12                                 --------->ANAC58                         --------->YAB1                         <---------At4g35610           -------   ----------->GT1      <---------YAB1                          --------->At4g35610          <-------TEIL  >>>>>>>>>TBF1  ----------->GT1                               ----------->RAV1(1)        --------->HSFC1(2) ---->DOF2     ---------->DOF2<------ZmHOX2a(1)           --------->CCA1(2)   --------->At4g35610 ->YAB1    ---------->DOF2--------->TOE1(2)            <---------ZAT6     --------->ANAC58<---------HSFC1(2)   agaagaagaaaaaaaaagaaagtaaaatcataggataagatggagaacaacttgatagagatagacagcagaaggcaagcagcaacagtagaagcttcat  16226100                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                      ---------------                                                                                <---------------AtSPL8                                                                   --------->GLK1(1)  <--------------        <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 *TSS     <---------GLK1(1) <---------------      <---------AHL20(2)                                 --------->ATHB12       --------------->AtSPL8    <---------RVE1(1)                                   <---------YAB1         <------------CBF   <---------ARR11(3)      <---------TOE2(3)       <---------At4g35610       <---------AHL20(1)  <------ZmHOX2a(1)  <---------YAB1   --------->YAB1  <---------At4g35610    --------->ARR11(3)   --- -->ATHB12           <---------AHL20(2)  --------->YAB1 --------->ICU4       --------->AHL20(1)  ----   tgcaggatttttttttttttttttttattgtggtaaacaagaatcacaagttttgctgatgattaaggggtttctgatatatattgtacatttttaggta  16226200   <-----------GT1 ->ANAC55(2) --->GT1 >MYB59                   <---------ZAT14                                        ---------->ID1 -TOE2(3)             <-----------GT1                                        ======================== -TOE1(3)          <------------CBF                                          <----------DOF2 >AGL15    --------->AHL20(2)               <-----------GT1               <---------ALFIN1 -AGL15   --------->AHL20(2)             <----------DOF2                 --------->ZAT14 --AGL1   <---------AHL20(2)  <----------DOF2       <-------MYC3        --------->AtMYB61         <-- ------>ICU4  <---------AHL20(2)      ------->TEIL  ------->MYC3        <---------ALFIN1   --------->ANAC58 -------->CBF --------->AHL20(2)   <---------YAB1<---------ALFIN1      --------->ANAC46    --------->ANAC58   acaattaacaaaataaataaatattgactatacttttatgaaacttttaccacacgttttttttttttcttccaccacactttgtcttcaaacaagaaat  16226300                                                                                       --------------     <-------MYC2                                                                     <--------------     ------->MYC3                                                                     ---------------     <-------MYC3                                                                     ---------------     ------->MYC2                                                                     <--------------     <-------MYC4                                                               --------->ANAC58     ------->MYC4                                                               --------->ANAC46    ===================================bZIP_DOF                                 --------->ANAC58  ---    --------->O2                                                               <---------LBD16    ---    <---------O2                                                         --------->ATHB12 --------->ARR14(2)    <---------TGA1a                                                    <----------DOF2<--------------    --------->ANAC55(2)                                                ------>ZmHOX2a(1)  <---------ARR14(2)    <---------ANAC55(2)          ----------->RAV1(1)                  --------->TOE2(3)<-------------    --------->TGA1a          --------->DAG2                        <---------ARR11(3) ---------------  <---------ALFIN1 --------->DOF5.7(2)           <------ZmHOX2a(1) --------->ARR11(3) --------------- =============bZIP_DOF      ---------->DOF2  --------->TOE2(2)  --------->YAB1<---------AtLEC2  ----- ---------HVH21    <---------MYB52(1)        --------->TOE1(2)  --------->AHL20(2)    <--------------   tgtcacacgtgttcattatccgttaacagaaaaagcagcatatcaaatctaggaaaaactctcaaataatatcctttattgcacggaggccaaatatgga  16226400                                                                    --------->TOE2(3)                                                                   --------->ANAC46                                                                   --------->ANAC58 ->AGL15                                                           ----------->GT1 ---AGL2                                                           --------->ANAC55(2) -->AG                                                       --------->AHL20(1) -->AGL2                                                     --------->AHL20(2) ---AGL3                                                --------->AHL20(2)   <---------ARR14(2) ------>ANAC58                                        ----------->GT1        --------->ARR14(2) ------>ANAC58                                        --------->ANAC58      <---------CCA1(2) ---AGL1                                              --------->ANAC58    --------->YAB1 --AGL15                --------->CCA1(2)     <---------AHL20(2)   <---------ANAC55(2) -->AGL3               --------->ARR11(3)     --------->AHL20(2)   --------->ANAC58 -->AGL1      --------->YAB1                  --------->AHL20(1)   --------->ANAC55(1)            --- ----->DOF2 <<<<<<<<<<<<WRKY18                <---------AHL20(1)  <-------TEIL   ------>ZmHOX2a(1)--- ---AG ----------->GT1 <---------ARR11(3)    --------->YAB1  <---------AHL20(2) --------->TOE2(3) <--   aagcaaatgtagtcaatagtcaatagatatgtctgttcaaacttcaaatataatgcaagtaaataaaatacgtaaatcatatcctaaaattttcaaaaaa  16226500                                              --------->ANAC58                                              --------->ANAC58                                            ------->GAMYB                                            ----------->RAV1(1)                                 <---------LBD16                           --------->AHL20(2) --------->ANAC46                           --------->YAB1   --------->AtMYB61 <---------AtMYB61 ------>TOE2(3)    <---------ANAC58      <-----------GT1 <-------TEIL     --------->HSFB2a(2) ------>TOE1(3)    <---------ANAC58--------->LBD16  --------->AHL20(2)    <---------HSFB2a(2)    ---- -------MYB59 <---------ICU4<---------YAB1 --------->MYB46(3)<---------TOE1(2)  <---------ARR14(2)   cctaaatgttacccaaatattgcttccattaatattccggtttcaaccacacaaaaaaattcgtatggtcgaacttccagcaaatttgacataaatattg  16226600                                                                                                  ---                                                                                                 ----                                                                                              -------                                                                                           --------->YAB1                                                                                        --------->TOE1(3)                                           --------------------->WRI1                   --------->TOE2(3)                              <---------AHL20(1)                                     <---------ALFIN1                              --------->AHL20(1)                                    <---------ZAT18                            <---------TOE2(3)                                     <---------At4g35610                           --------->YAB1  <----------DOF2                        --------->At4g35610    --------->AHL20(2)     --------->AHL20(2)                                 <-----------HVH21  ---- ------->GT1    <-----------GT1   <-----------GT1                 <---------TOE2(3)<---------ALFIN1 -   ggtcaaaaatataagttatttcgctccattaatatttttctgtttctttgtttgttttgatgaaaattgatgttatactatgtcagcacaccttaataat  16226700  Previous    Next  AGI:  At4g33840.1    Description:  glycosyl hydrolase family 10 protein. similar to hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT4G33830.1); similar to glycosyl hydrolase family 10 protein [Arabidopsis thaliana] (TAIR:AT4G33860.1); similar to endoxylanase [Carica papaya] (GB:AAN10199.1); contains InterPro domain Glycoside hydrolase, family 10; (InterPro:IPR001000); contains InterPro domain Carbohydrate-binding, CenC-like (InterPro:IPR003305); contains InterPro domain Galactose-binding like (InterPro:IPR008979); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 16223506    to: 16226158    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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