Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         -------->ATHB1                                                                       --------->ATHB51                                                                       <---------ICU4                                                                      <---------YAB1                                                               <---------YAB1                    <---                                                             --------->YAB1                      <---                                                            --------->ICU4                       <---                              <---------REM1(2)             <---------YAB1                       <---               ----------->GT1--------->ZAT14             --------->YAB1                     <------- ---GT1       ----------->GT1 <---------ZAT14            --------->ICU4--------->ATHB12      <-------   tctaaaccaaaaaaaactggaaaaaacaattctacactgaaaaatactgaaaccatgaaatgatgatgatgcattattgtataaactagagaatgggttg  16219100      ----------->GT1     --------->ALFIN1    ------->MYC2    ------->MYC3    <-------MYC2                          <---------ANAC58    <-------MYC3                          <---------ANAC58  ------->TEIL                      <---------AHL20(2) ------ANAC46                       <---------ICU4 ------ANAC58                  --------->At5g28300 ------AtLEC2               --------->At4g35610              --------------->AtSPL8 ------ANAC58      -------->P ----------->GT1      --------->At4g35610 --ANAC58         <-----------GT1  --------->ICU4  <---------At4g35610           ------->TEIL --ANAC58<-------TEIL      --------->GLK1(2)   <---------REM1(1)              <---------ATHB12    <--   catgcatgtggtacatatagttaccagagaagctgtaaatatttccttggtgaagctgaattctctgtgccatttctctaatgaatccatttccatcaat  16219200                                              --------->YAB1                                 --------->At4g35610  <---------ANAC58                                ----------->GT1    ------>ZmHOX2a(1)                               <---------RAP2.6(2) <----------DOF2                           ---------->DOF2<---------YAB1                        <---------HSFB2a(2)  --------->ICU4                                       <--                        --------->HSFB2a(2)--------->YAB1                                        ----                   <---------At4g35610  --------->YAB1<---------ANAC58                 --------->ANAC46          <---------At4g35610 <---------At4g35610<---------ICU4    <---------ANAC46  <---------ALFIN1 ---------GT1      --------->At4g35610  ----------->GT1    <-----------GT1    --------->REM1(1)  ----   tttccattcttcatcagagtcatcttcgagagagcggctaaattgtaataatcctttcgtttcactgcttcgtggaggcttcatcacacacttcattcgt  16219300             <---------------AGL15             --------------->AGL15                                              <---------TOE2(3)            ----------------->AGL1                                              <---------TOE1(3)            ----------------->AGL2                                        <---------AHL20(2)           >>>>>>>>>>>>>>>>>LFY                                           --------->AHL20(1)          <-----------GT1                                                 <---------AHL20(1)      <---------GLK1(2)                                <---------YAB1     --------->AHL20(2) --------TaMYB80                                     <---------ICU4--------->ARR11(3) ------>TaMYB80                                 --------->AHL20(2) <---------ARR11(3) ----->ARR14(2)                              --------->YAB1       <---------CCA1(2)    <-----------GT1   atataccagaatttaccaatgttagaaagtctgaatttataaatctataaaaaaatcatttttgtgatatatctattttattgaggttttatcagttttg  16219400                                                                  <------NtERF2                                                                  --------->At4g35610                                                                  <---------At4g35610                                                             --------->ANAC46                                                            ------->MYC3                                                            <-------MYC3                                                           <---------O2                                                           --------->O2                                                       <<<<<<<<<GATA-3                                                       <<<<<<<<<GATA-1                                                       <<<<<<<<<GATA-4                                                      --------->ARR14(2)                                                 ----------->RAV1(2)                                                 <---------LBD16 ----------->RAV1(1)           ------                                                 ============================RAV               ------                                             <---------GLK1(1)   ------>NtERF2     --------->AtLEC2                 --------->ALFIN1     ------>ZmHOX2a(2)<<<<<<<<<GATA-2         --------->ARR11(3)         --------->REM1(2)         <------ZmHOX2a(1)  <---------ARR14(2) ----------->GT1  <------ZmHOX2a(1)   atatacctctgtgttgagagagtggctatgggagaaaggatcgatggaaacccctgaatccacatggcaccagagaagaaaaatcatgcagaggaagaag  16219500                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                         --------->CCA1(1)                                                                  --------->At4g35610                                                                --------->DAG2                                                               ---------->DOF2                                              ----------->RAV1(1) <---------At4g35610                              *TSS       <---------ARR11(3) ----------->TBP                        --                          ----------->GT1--------->ARR11(3)<---------AHL20(2)                     <-- --->ANAC58           <----------DOF2   --------->CCA1(1) --------->AHL20(2)                     ---- --->ANAC58     <---------At4g35610     --------->RVE1(1)<---------YAB1  --------->RVE1(1)      <----   ccattcttgatgctgttcatcttcctttcagttaaaactgaaatatcccaacaaaacttattatataaagctgaaatatcccaaaaaaaaaaaaacttat  16219600                        --------->GLK1(2)                       --------->ARR14(2)                       <---------ARR14(2)                                  <---------AHL20(2)               <---------ANAC58                                         --------->AHL20(1)       <----------DOF2 <---------GLK1(2)                                <---------AHL20(1)  ---------->DOF2     <---------At4g35610                               <---------ARR11(3) --------->TBP<-------TEIL                                  --------->TOE2(3) <----------DOF2 -------AHL20(2)  <-----------HVH21                         --------->ANAC55(2)     ------>ZmHOX2a(1) ----->AHL20(2)<---------ANAC58            ----------->GT1<-----------GT1  <-----------GT1 -----YAB1--------->MYB59            <---------YAB1   <----------DOF2   --------->ARR11(3)          -   tatataaagctttaggtacttgtcagattctactgtattcttatactgaaaataggctttatacttaatacaaatattttcttttcctatgggaaacgac  16219700                                                             ------>MYB83                                                             -------->P                                                             ------>MYB46(1)                      ---                                                           <---------MYB46(2)              <---------AHL20(1)                                                           <---------MYB111(2)             --------->AHL20(1)                                                           --------->MYB46(3)              --------->ARR11(3)                                                           <---------MYB55(2)            <---------AHL20(1)                                                           <---------MYB111(1)           --------->AHL20(1)                                                   --------------->AtSPL3                <---------AHL20(2)                                                   --------------->AtSPL8            ------>ZmHOX2a(1)                                                   <---------------AtSPL8           --------->TOE2(3)                                               <---------AHL20(2)                <---------ARR14(2)                                               --------->AHL20(2)                --------->ARR11(3)                                         --------->WRKY18(1)--------->MYB55(1)   <---------ARR11(3)      --------->ANAC46                  --------->At5g28300--------->AtMYB61     --------->ARR14(2) -------->AHL20(2) <---------ARR11(3)  ----------->GT1 --------->SPL7     --------->REM1(1)<---------ARR11(3)   tataaaatacacaattgccaagaactacatagacttcaatacggtcaatataaatcgtacacctaccattcaagttacaacaatatcctaaaatattttt  16219800                                                        --------->GLK1(2)                                                --------->CCA1(2)                                               <---------ARR11(3) --------->AHL20(2)                                         <---------YAB1--------->ARR14(2)                                         <---------ATHB12   <---------At4g35610                                       ------>MYB46(1) <---------GLK1(2)               <---------ARR11(3)                                       ------>MYB83    <---------ARR14(2)  --------->TOE2(3)                                  <-----------GT1    ----------->ARR10<---------AHL20(2)                              <---------DAG2<---------WOX13(1)<---------YAB1 --------->AHL20(2)            --------->AHL20(2)<----------DOF2  --------->ARR11(3)<---------YAB1        --------->ARR11(3) ------->DOF2              <-----------GT1--------->ATHB12  --------->At4g35610 ---------->DOF2<-----   aaaagaccaaaaaaaaaaatggattatagtcactttttaccaaatgatagatatgtagattctgctgattatttattcattaaaaaggagatgtttcatc  16219900                                                                                                 <---                                                                                                 <---                                                                                           --------->AHL20(2)            <---------AHL20(2)                   --------->YAB1                            <---------AHL20(2)           <---------AHL20(1)                   <---------ATHB12                           <---------AHL20(1)           <---------AHL20(2)             <---------WRKY18(1)                              --------->AHL20(1)           --------->AHL20(2)            ----------->HVH21          <----------DOF2       --------->AHL20(2)           --------->AHL20(1)          <---------ANAC58       <---------MYB52(1)        --------->TOE2(3) ----At4g35610         <---------ATHB12<---------ANAC58   <---------ATHB12      <---------At4g35610   taatatgaagaaataaaatttcccaacaattcttcaacaatgcttgaccaatgaccacaaatcagttagtctttattttgtcatctaatacattaaattg  16220000  Previous    Next  AGI:  At4g33820.1    Description:  glycosyl hydrolase family 10 protein. similar to endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G14690.1); similar to glycosyl hydrolase family 10 protein [Arabidopsis thaliana] (TAIR:AT4G33810.1); similar to endoxylanase [Carica papaya] (GB:AAN10199.1); contains InterPro domain Glycoside hydrolase, family 10; (InterPro:IPR001000); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 16217009    to: 16219530    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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