Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              ---------->DOF2         <---------MYB59        --------->HSFB2a(1)         --------->ANAC58     <----------DOF2             --------->ARR14(2)                <--------         --------->ANAC58<----------DOF2                  <---------ARR14(2)              <---------TOE1(2)       ---------->DOF2--------->ARR11(3)                  --------->ARR11(3)             ------>ZmHOX2a(1)     <----------DOF2  <---------ARR11(3)                  <---------ARR11(3)    --------->ANAC46  ------>NtERF2    ----------->RAV1(1)             --------->AtLEC2         ------>ZmHOX2a(1)   <----   atgccacctttaagcaaagtccaacatcttttctttgccctaacttcacctccatgaacaaatcttccattttctgtcctaaacacaactcctactttct  16215200                               ------->TEIL                     <---------ATHB12                           --------------->AtSPL3             --------->WOX13(1)                           --------------->AtSPL8            <---------WRKY38(1)                          <---------ZAT2                     <---------WRKY12                          --------->ZAT2                    --------->WRKY18(1)   <-----------GT1   --------->ANAC58                     <------MYB83           <---------ZAT14 --DOF2              --------->ANAC46                <---------TOE2(3)     --------->ANAC55(2)   <--- -----YAB1           --------->ANAC58      ---------->DOF2<------MYB46(1)  <---------ANAC55(2)   ----   tattgtttccttctctcaacttcacccaagctgtacttccattaacaaagaaactatggatggtcaatgaaacgattatgtattacactgaaatcagact  16215300                                                                                       <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                  --------->ICU4                                                                               <---------YAB1                                                                              --------->AHL20(1)                                                                              <---------AHL20(2)                     --------->GLK1(2)                                        <---------AHL20(1)                    <---------GLK1(2)                                        --------->YAB1 <--------           <---------YAB1                            --------->ANAC58        --------->AHL20(2)         --------->YAB1                              --------->ANAC58   <---------YAB1--------->AHL20(2) ------ZAT14   <-------TEIL           --------->At5g28300             --------->YAB1 <---------YAB1 ----->ZAT14  --------->CCA1(2)      ----------->GT1 --------->ANAC46--------->ICU4<---------AHL20(2)   gaacacaactatcaagattcaagaatctctggtttgaaacagtaacttactagacaagaaaccatgaaacgatgatgaattatatttattatatataaac  16215400                   <---------------AtSPL8                   --------->ALFIN1                  <-------MYC3                  <-------MYC2                  ------->MYC2                ------->TEIL           <---------ANAC58           <---------AtLEC2           <---------ANAC46       <-------GAMYB       <---------ANAC46           --------->MYB52(1)       <---------ANAC58      --------->AHL20(2)                                                    <-       <---------ANAC58     <---------AHL20(2)                                                    ---      <------MYB46(1)  <-------TEIL        --------->At4g35610                                  -----      <------MYB83------->MYC3   <-----------GT1                  <---------At4g35610           -----    --------->ALFIN1----------->GT1       --------->GLK1(2) <---------ANAC46    <-----------HVH21<--- -AHL20(2) <---------ANAC58 --------->AHL20(2)--------->At5g28300 --------->At4g35610           <----   tagagagtgggttgcatgcatgtggtacatataaattaccagagaagctgtaaatgtttccttcgtgaagctgaattctctgtgtcatttctcttatgga  16215500                                                             --------->YAB1                                                            --------->ICU4                                                --------->At4g35610  <---------ANAC58                                               ----------->GT1    ------>ZmHOX2a(1) --------ALFIN1                               <---------RAP2.6(2) <----------DOF2 --->ZmHOX2a(2)                           ---------->DOF2 --------->YAB1 ---->ARR14(2)                        ----------->HVH21  <---------YAB1 -->TEIL     <-----------GT1      --------->At4g35610  ----------->GT1    <-----------GT1 ---ZmHOX2a(2)                    <---------At4g35610  --------->YAB1<---------ANAC58 -----ARR14(2)           <---------At4g35610 --------->RAP2.6(3)<---------ICU4    <---------ANAC46  <   tccacttccatctattttccattcttcatcagagtcatcttcgacagagcggctaaattgtaataatcctttcgtttcactgcttcgtggaggcttcatt  16215600                                                                 <---------AHL20(2)                                                              --------->AHL20(1)                                                              <---------AHL20(1)                            --------------->AGL15            --------->AHL20(2)                           ------------>CBF            <---------ANAC55(2)                          >>>>>>>>>>>>>>>>>LFY       --------->AHL20(2)                        <-----             <----------TaMYB80                  <---------AHL20(2)                            <-----            --------->ARR14(2)                   --------->AHL20(2)                        <---------            ---------->TaMYB80                  --------->AHL20(2)                        --------->ATHB12  --------->ANAC46       <-----------GT1        <---------AHL20(2)                        <---------AHL20(2) ---------ALFIN1     <---------GLK1(2)  --------->ATHB12--------->TOE2(3)                --------->ICU4   acacacttcattcgtatataccagaatttaccaatgttagaatgtttgaatttaattacataaatatataaaaaatcacttctatttagtatttattgag  16215700                                                                --------->LBD16                                                               --------->LBD16                                   <---------ANAC46           <---------LBD16  <-----------------AGL1           <---------ANAC58       <---------GLK1(1) <-----------GT1          <---------ANAC58        <------ZmHOX2a(2)                             ----- ----TOE2(3)              <---------ANAC58        ------------>CBF                    ----------->GT1 ----TOE1(3)            <---------YAB1          <------ZmHOX2a(1)       --------->ANAC46  ---------->DOF2 ---CBF   <---------MYB46(3)       <---------ANAC58  <------------CBF--------->ZAT18 <------ZmHOX2a(1)   gtttatcagttttggttacctctgttttgagtgagtcgcttggggagaaaggatcaattgaaatccccgaatgcacaaaacaccagaggagtaaaagcat  16215800                                       ----------->GT1                                     <-------GAMYB                                      <---------HSFB2a(2)                                 --------->MYB55(2)                                      --------->HSFB2a(2)          ------------>CBF       <---------MYB46(3)                                   ------>ZmHOX2a(1)         ----------->TBP              --------->MYB111(1)        --------->ANAC58         ------>ZmHOX2a(2)    <-----------GT1                     --------->MYB111(2)        --------->ANAC58       --------->ARR11(3)     <---------ARR11(3)          <----------DOF2   <------ZmHOX2a(1)           <---------ARR11(3)     --------->ARR11(3)     ---------->DOF2    <----   =====================================HOX2a_HOX2a  --------->CCA1(1)     <---------YAB1<--------P ---->AtLEC2<------------CBF <---------YAB1          --------->RVE1(1) <---------ATHB12 <-------GAMYB   gcagaggaagaagccattgttgatgttcttcatgatccttccagtaaaaactgaaatatccctacaaaacccaatctatgaaagctttggggttgttaga  16215900                   --------->ARR14(2)                   <---------ARR14(2)                <---------MYB59               --------->ANAC46                                 <---------ICU4           --------->YAB1                                    <---------AHL20(2)          <---------YAB1                                    --------->AHL20(2)       <---------MYB52(1)<----------DOF2                 ------>ZmHOX2a(1) -----GLK1(2)<-----------GT1                         <-----------GT1                             <---   ttctactctgttattataccgaataggctttatattgtagataactatgtcttattttcctattaaaaatgactacaaattccacaattcgaaacaaata  16216000                                                                           <---------DAG2                                                                 --------->ANAC58                                                                 --------->ANAC46                                                                 --------->ANAC58                                                                --------->SPL7                                                              <---------SPL7<----------DOF2                                                              --------->TOE1(2)                                                             <---------ANAC55(2)                                                             --------->ANAC55(2)                                                             --------->ANAC58                                        --------->ZAT6       --------->ANAC58                                   --------->TOE2(3)         --------->ANAC55(1) <---------At5g28300                              --------->At5g28300            --------->ANAC46   <-----------GT1                             ----------->GT1                <---------------AtSPL3       --------->MYB52(1)  --------->SPL7                   --------------->AtSPL3     <---------MYB52(2)<---------------AtSPL8        ----------->GT1    <-----------GT1            <- ------ANAC55(2)       <---------------AtSPL3 <<<<<<<ZML2   <---------------AtSPL8           <-------   tgtaagaactaactacatatatagactagtacggtaaacttaaaactagaacaagaagtaaacacgtacgaaatatacctttttacccctaaattgtgta  16216100  Previous    Next  AGI:  At4g33810.1    Description:  glycosyl hydrolase family 10 protein. similar to glycosyl hydrolase family 10 protein [Arabidopsis thaliana] (TAIR:AT4G33820.1); similar to endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G14690.1); similar to endoxylanase [Carica papaya] (GB:AAN10199.1); contains InterPro domain Glycoside hydrolase, family 10; (InterPro:IPR001000); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 16213329    to: 16215599    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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