Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------HSFC1(2)                        <---------HSFB2a(1)                                                    ------                        --------->HSFC1(2)                                             <---------ANAC46                        --------->HSFB2a(1)                                            <---------ANAC55(2)         --------->ATHB12                                                              <------MYB46(1)   ---------->DOF2  --------->ANAC58                                                   <------MYB83 -ATHB12<-------TEIL--------->ANAC58                                          ---------->DOF2  ------ >MYB46(3)    <---------ANAC46                        <---------YAB1 <---------AHL20(2)----------->GT1   gagtagaaagttcattgctgagacgaaacttctaaatactaatctactgaaacattatgcttcacgactatataatgcaaaaaagcattaggtgaaacct  16192900                                               ------>NtERF2                                              --------->RAP2.6(2)                    --------->ZAT18                                             --------->ZAT18                         <---------ZAT18                                    ---------->DOF2                            ---------->DOF2                                   <------ZmHOX2a(1)                        --------->ANAC58                      ====================HOX2a_HOX2a                       --------->ANAC46                      ------>ZmHOX2a(2)    <---------bZIP60(1)              --------->ANAC58                    <---------ARR11(3)     --------->bZIP60(1)         --------->MYB46(3)               <---------MYB52(1)<---------TOE1(3)                  ------>NtERF2--------->DAG2    -- ----------->RAV1(2)--------->ARR11(3)  --------->ALFIN1            <---------ATERF1(1)    <--------- --->TOE2(3)  <---------RAP2.6(3)<---------TOE2(3)    ------->TEIL ----------->HVH21--------->ALFIN1 --->TOE1(3)<---------LBD16<---------TOE2(3)------>NtERF2   ----------->HVH21--------->LBD16       --   taaacctggacaatgccggtatgatctctaagattaaggaaagtgaggccaccatgaactcggtgaagggcgacccatccgcaaaggtggactcttttac  16193000                                              <---------LBD16                                             --------->MYB52(1)                                             -------->P                                             ------>MYB83                                             ------>MYB46(1)                                            --------->MYB55(1)                                            <---------ALFIN1                                           --------->DEAR3(1)                                      ==                                    <-----------HVH21   --------->MYB52(1)                         <-                      ------>NtERF2 --------->LBD16    --------->DEAR3(1)                         ---                      <------NtERF2<---------ANAC58    ----------->HVH21                          <--                     --------->RAP2.6(2)   <---------MYB55(2)                                    <---         <---------WOX13(1)        <---------ANAC58 <---------ARR14(2)                         <-----       <---------WRKY18(1)      <-----------HVH21   --------->ARR14(2)                         ------      --------->WRKY12--------->LBD16----------->HVH21--------->DEAR3(2)                      -------   --------->ATHB12  --------->DEAR3(1)    --------->MYB46(3)           --------->DEAR3(2)    <------  <---------YAB1    --------->RAP2.3(1)   --------->ANAC58            --------->ARR14(2)      <------ ---->MYB83--------->YAB1      ----------->HVH21--------->LBD16       <---------ARR14(2)     -------- -DOF2--------->WRKY38(1)<---------CCA1(2)--------->ANAC58     <------ZmHOX2a(1)       --------->REM1(1) ---->MYB46(1)    --------->ANAC46 --------->ANAC55(2)--------->MYB46(3)--------->ATERF1(1) <--------   caacatcattgactgataactcgccgcatagctctgtccgtgacacccaccggagaaccgacggaggagatggaaccggcttcactactacatcgccgga  16193100      ----------->RAV1(1)     ----------->HVH21 --------->At4g35610 <---------At4g35610                   --------->LBD16 <---------ZAT2                        <---------HSFB2a(2) --------->ZAT2                       --------->HSFB2a(2) <------NtERF2                        <---------HSFB2a(2) =================RAV                 <---------LBD16 ----------RAV1(2)                    <---------ANAC46 ------>ATERF1(1)                    <---------LBD16             <---------TOE2(1) ----NtERF2                        <---------ARR14(2)            <---------TOE1(1) ------ATERF1(1)          --------->ARR14(2)                    --------->SPL7 -NtERF2                --------->HSFC1(2)               <---------MYB52(1)                     ----- --->ATERF1(1)          <---------HSFC1(2)     <------MYB46(1)<---------SPL7                   ------ -->LBD16               --------->HSFB2a(1)    <------MYB83  <---------ANAC58      <---------ANAC58 ---ATERF1(1)           <---------HSFB2a(1)  --------->ALFIN1<---------ANAC58      <---------ANAC58 ---SPL7      --------->ARR14(2)   --------->ARR14(2)<-----------------AGL1        <---------ANAC46 ->DEAR3(1)   <---------ARR14(2)  <---------GLK1(1)  ---------->ID1         --------->ICU4     <----- -LBD16 <-----------RAV1(2)<-------TEIL--------->HSFB2a(2)  <---------------AtSPL8 <---------ZAT6   ggcagctgcaacaggggaactggagaaggttcttcgagttccgggaagtgggtttgtccgtttgggtacgacgaagaaattagtagcgttagagatggat  16193200         <------NtERF2        --------->LBD16       <---------ANAC58                                                *TSS<---------ZAT6       <---------ANAC46      <------NtERF2                          <---------SPL7       <---------ANAC58    <---------DEAR3(1)                     --------->ALFIN1      <---------LBD16   <------MYB46(1)                         <------MYB83    <---------DEAR3(1)  <------MYB83                            <------MYB46(1)    --------->ALFIN1   --------->MYB111(1)                      <---------ANAC46    ----------->HVH21  --------->MYB59            <------ZmHOX2a(1) ----------->HVH21  <-----------RAV1(1)  <---------AtMYB61       <------ZmHOX2a(1)<---------ANAC58  <---------MYB46(3)  <--------P             <---------TOE1(2)  <---------ANAC58 ---->CCA1(2)  <---------ARR14(2)          --------->TOE1(2)   --------->MYB55(2)      ----------->GT1 --->ARR14(2)  --------->ARR14(2)        <-------TEIL          <---------MYB46(3)  ---------->DOF2 ----ARR14(2) <------ZmHOX2a(1)     ---------->DOF2        <-----------RAV1(1) --------->MYB59-------   atggctgtggcggagaggaaacgagtaggtcggagaggcaaagttcgtaggaggagagacattgttgggtgggacgagagttagataaagagagaaaagg  16193300                                                                          ------->TEIL                                                                         --------->ARR14(2)                                                       --------->ATHB12  --------->MYB52(1)                                                     <---------WOX13(1) ------->GAMYB         <---------ANAC46                           <------------CBF   <---------MYB52(2)         <---------ANAC58                         <---------TOE1(3)  --------->MYB52(1)     <------------CBF        ------------>CBF     <---------YAB1<-----------TBP   ----------->GT1 <---------TOE2(3)   <----------ID1               <---------TOE2(3)  <-----------GT1       --------->YAB1 -->DAG2 <---------ANAC58    <---------ATHB12----------->GT1----------->GT1--------->MYB46(3)  <-----   tttaagggattgcgtttttagagacgacgaaatcaattcgatcgaaccggttaagattgattcggtttatataacgaaccgctatggtcaaaataagaat  16193400                 <----------DOF2                 --------------------->WRI1             <---------WRKY45             <---------WRKY38(1)             <---------WRKY12            --------->WRKY18(1)            <<<<<<<<<<WRKY43            <<<<<<<<<<WRKY11            <<<<<<<<<<WRKY38            <<<<<<<<<<WRKY6          <------MYB46(1)          <------MYB83         <---------MYB46(3)         --------->MYB59       <---------MYB52(1)                                                                      ------  <---------GLK1(1)                                                                          --------  --------->GLK1(1)                                                                        --------->HSFB2a(2) --------->ARR11(3)            ----------->GT1                                             <---------HSFB2a(2) <---------ARR14(2)  <---------AtLEC2                                        <---------At4g35610 ----GLK1(1)<<<<<<<<<<WRKY26   <---------ANAC46                 --------->YAB1            -----------   tcagatatcgtttggtcaactttggatgaagagacgtttatttcactgaaaattcaaaatcagtaatcaaaacttgtttatctgatactgcttccaaaag  16193500                                                                                     <----------DOF2                                   --------->AHL20(1)                        <------NtERF2                        <--------HAHB4                                      <---------RAP2.6(3)                        --------->ATHB51                                    ------>NtERF2                        <---------ICU4                                     --------->RAP2.6(2)                       --------->ICU4  <---------AHL20(2)                  <---------ATERF1(2)          --------------->AtSPL3   <---------AHL20(1)                      --------->RAP2.3(2)  <---------At4g35610--------->TOE2(3)<---------YAB1                       --------->ANAC46  ----------->GT1   ----------------->AGL3                                 --------->RAP2.3(3)  --------->At4g35610<---------------AGL15   ---------->ID1                --------->ATERF1(2) --->DAG2 --------------->AtSPL8   <---------AHL20(2)                      --------->DEAR3(1) -->DOF2--------->GLK1(2)          --------->AHL20(2)                     --------->RAP2.3(1) ------>AGL1        ----------------->AGL2 <-----------RAV1(1)            --------->ERF1   ggagagctaaattctgtacaaatccataattagacattttattatttgtcgcttcttagtagaccatctaaaaactgccgccattttctttcatttacaa  16193600                             --------->ARR14(2)                             <---------ARR14(2)                                   --------->TOE1(2)                             <---------GLK1(2)                                 <---------ARR14(2)                             --------->ARR11(3)                                --------->ARR14(2)                             <---------ARR11(3)                               <---------MYB52(1)                        ------>NtERF2                                        --------->LBD16                        ----------->RAV1(1)                                 <---------ANAC58                       --------->ANAC46                                     --------->HSFB2a(2)                     <---------ATERF1(1)                <---------ANAC46    --------->ANAC55(2)                   ----------->RAV1(2)                  <---------ANAC58    <---------ANAC55(2)                   =================RAV --------->GLK1(1)                   <---------ANAC58                ----------->HVH21<---------HSFB2a(2)    <---------ANAC58    --------->ANAC46            <---------YAB1<-----------RAV1(2)  ---------->DOF2             <---------LBD16   tgttgtctcttcttatatttgacctgcgccagattttggaagaaatctacaaagacttgctcgtagtctggcagttttccgtaacctgcaaatcgatatc  16193700                <---------ZAT14           --------->ZAT18           --------->ZAT14                                               --------->LBD16           <---------ZAT18                                  ----------->GT1           <---------ZAT14                                  <----------ID1       --------->DAG2--------->At4g35610              --------->YAB1    <---------LBD16            --      ---------->DOF2<---------At4g35610   ---------->DOF2 ----------->GT1----------->GT1        ---- ----------->GT1--------->ZAT14          --------->ANAC46--------->MYB52(1)<------ZmHOX2a(1)  -------   aaacagagaaaagttcacttctctgcttccatgagagaactacacaaaagcttcaaaaataagggaaaaacttgccaggaaaatagttgatgtcaataac  16193800  Previous    Next  AGI:  At4g33760.1    Description:  tRNA synthetase class II (D, K and N) family protein. similar to OVA5 (OVULE ABORTION 5), ATP binding / aminoacyl-tRNA ligase [Arabidopsis thaliana] (TAIR:AT3G13490.1); similar to hypothetical protein OsJ_000409 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10584.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ81588.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49856.1); contains InterPro domain Aspartyl-tRNA synthetase, class IIb; (InterPro:IPR002312); contains InterPro domain Aminoacyl-tRNA synthetase, class II; (InterPro:IPR006195); contains InterPro domain Nucleic acid binding, OB-fold, tRN Range:  from: 16189146    to: 16193271    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g33770.1    Description:  inositol 1,3,4-trisphosphate 5/6-kinase family protein. Identical to Inositol-tetrakisphosphate 1-kinase 3 (ITPK3) [Arabidopsis Thaliana] (GB:O81893;GB:Q058I3); similar to inositol 1,3,4-trisphosphate 5/6-kinase family protein [Arabidopsis thaliana] (TAIR:AT4G08170.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61536.1); contains InterPro domain Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427); contains InterPro domain Inositol 1, 3, 4-trisphosphate 56-kinase; (InterPro:IPR008656) Range:  from: 16193424    to: 16196430    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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