Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------ARR14(2)                                        --------->ARR14(2)                                    <---------LBD16                                   ------->TEIL                                <---------REM1(1)                                --------->ALFIN1                --------->ANAC46                              <---------At4g35610           <------ZmHOX2a(2)      --------->KAN4(2)       --------->At4g35610 --------->ARR11(3) ----->RAV1(1)              <-----------RAV1(2)   <---------ARR11(3)    ---------->DOF2       ------- ----ID1            <---------TOE2(3) --------->LBD16      --------->ARR11(3)                 ------- ->At4g35610       <-----------GT1 --------->MYB52(1)      <---------ARR11(3)             --------->YAB1   caaaagattatacctgcatatttacgatgttcaggtgtaccggatttagcgagaacttcaagatcaacgagactcaaagacataagacccaatgttaagc  16179100                                                                                         --------->YAB1                                                                                  ------->GAMYB                                                                                  --------->RAP2.6(2)                       --------->ANAC58                                           --------->DREB2C(2)                       --------->ANAC58                                           --------->DEAR3(1)                  --------->ANAC58                                                --------->ANAC46                  --------->ANAC58                                          --------->ANAC46             <---------ZAT18                                           <-------TEIL------>NtERF2        <---------ZAT14--------->ANAC46                           ----------->RAV1(1)  --------->AtLEC2    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     --------->At4g35610 --------->MYB46(3) -->ANAC58  <---------MYB52(2)        --------->At4g35610    <---------At4g35610<---------ATERF1(1) -->ANAC58 <---------At4g35610    --------->YAB1 ---------->DOF2<------NtERF2  <---------ALFIN1   cagacatgagtccagcgaacaagacaagaaacacaatcacagctatatgtataaagaagtttgggctgcaacatacatactccaccgccattcaaaatcg  16179200                                                             <---------ZAT18                                                             --------->ZAT18                                                           --------->ZAT2                            --------->At4g35610            <---------ZAT2              ------>ZmHOX2a(1)                           <---------ARR11(3)              --------->At4g35610<---------ARR11(3)                         ---------->DOF2                   <---------At4g35610--------->ARR11(3) <----------DOF2--------->MYB46(3)               --------->ANAC46         ----------->HVH21   actctttaagagaaaacaacaatccccaagagctcaaaaatcggaaaacacactaaaccctagctcactcgcagagttgacatcttctccttctccaaaa  16179300                                                                   --------->ANAC58                                                                   --------->ANAC58                                                               --------->ANAC58                                                               --------->ANAC58                                                               ------>MYB46(1)                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)              ---------->DOF2                                                   <---------ARR14(2)          --------->DAG2    <---                                                   --------->ARR14(2)     ----------->GT1        ----             <------ZmHOX2a(1)           --------->MYB52(1)>>>>>>>>>MYB2  <---------ZAT6        -----        --------->GLK1(2)    ------>NtERF2 --------->MYB46(3)  ------>MYB83   ---------->DOF2   -----   ctttcttcagaatcaggaaatgaacagtctccgactcaattagtaacgactaagatcggaaaaccaagcacgaagagagttaaagtgaagcccagaaaat  16179400                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                           <---------ANAC46                                                                                          <---------DEAR3(1)                                                                                      --------->TGA1a                                                     --------->YAB1                   <---------ANAC58                                                     <---------ICU4                   <---------ANAC46                                                     --------->ATHB51                 <---------TGA1a                                                    --------->ICU4                    <---------ANAC58          --------->DAG2                            <---------ATHB51        ----------->RAV1(1)  <---         ---------->DOF2                            <---------ATHB12        --------->MYB52(1)  -----    --------->AHL20(2)     <---------ANAC46       --------->WOX13(1)     --------->ANAC46<---------ZAT14 ------ARR11(3)          <---------ANAC46      --------->ANAC58 ----------->GT1     *TSS --------->SPL7 ----->ARR11(3)       <-----------RAV1(1)      --------->ANAC46----------->GT1 =================MYC_MYB ---->RVE1(1)   <---------DAG2           --------->GLK1(1)   <---------At4g35610 <---------GLK1(2)<-- ---->CCA1(1)   <----------DOF2<----------DOF2 --------->ANAC58<---------YAB1  ------->GAMYB --------   atctgattaaaaaaagcactttttgtgttgtgtctttgcagagaaatcgaagcaattatggagagatgataaaacaaacaacagagtctcgtgcggtgga  16179500       <---------------AGL15       --------------->AGL15      <-----------------AGL2      <-----------------AGL3      ----------------->AGL1                  --------->YAB1                 --------->At4g35610      ----------------->AGL3                  <--------ATHB1                 <---------At4g35610      ----------------->AGL2             ------------>CBF                --------->TOE1(2)  --------->At4g35610                --------->YAB1                     <---------TGA1a <---------ALFIN1                    <---------ICU4                     --------->TGA1a -----ZmHOX2a(2)                    <---------YAB1                      =======================bZIP_DOF ------->CCA1(2)                   <---------AHL20(1)                   <---------ANAC55(2) ------>AGP1                       <---------AHL20(2)                   <---------ANAC58 -------ARR14(2)              <---------ARR11(3)                        <---------ANAC58 ------>ARR11(3)              --------->ARR11(3)                        --------->ANAC55(2) ------>ARR14(2)      ------------>CBF  --------->YAB1               <---------SPL7 ----->GLK1(1)     <-------MYC2    --------->AHL20(2)                --------->TOE2(2) ------GLK1(1)     <-------MYC3   --------->YAB1       <---------ZAT14 <-------TEIL            ------ ------>ARR10      ------->MYC3  <---------YAB1        --------->ZAT14 ------->TEIL ---------->DOF2 -------ARR11(3)   ------->MYC2<---------CCA1(1)    ----------->RAV1(2)--------->SPL7 --------->DAG2 ->ALFIN1<-----------TBP--------->WOX13(1)   <---------ATHB51       <---------ANAC55(2)        <-----   gatccactgccatatatagaacgtggcaattagatattataatgacaataatacccctgtagtgagggctacgtacgtgagatgacaaaaggtgttttcg  16179600                                                                    --------->ARR14(2)          -----                                                               <---------ANAC46           --------->ANAC58                                                       --------->ANAC46              --------->ARR14(2)                                           <---------ZAT2      <---------bZIP60(2)   <---------ARR14(2)                                <---------bZIP60(2)   <---------LBD16             --------->ANAC55(2)                       <---------AHL20(2)  <---------STY1(2)----------->HVH21     <---------ANAC55(2)                 ------>ZmHOX2a(1)  <---------At4g35610--------->LBD16         --------->ARR14(2)                 <----------DOF2--------->ANAC58     <<<<<<<<<<E2Fe <---------ARR14(2)    --------->ANAC58          <---------ANAC58      --------->ANAC58     <<<<<<<<<<E2Fd --------->ARR11(3)    --------->ANAC46        <-----------HVH21    ----------->HVH21       <<<<<<<<<<E2Fa<------ZmHOX2a(1) <---------GLK1(2)   ----------->HVH21  <---------AHL20(2)   --------->ZAT2 <----------DOF2      <---------ARR14(2) <-- ----->GT1<---------ANAC58 --------->YAB1  --------->STY1(2)----------->TGA1------>ZmHOX2a(2)  ------ ----ANAC46   ---------->ID1 ----------->TGA1        <<<<<<<<<<E2Fc================HOX2a_HOX2a ------   taaatttgacggtcgtgtcctttttttaatggtgacgcagcaactagctgggttttcccgctatgacgaggattttgatccgatacggattctcgccaca  16179700                                                      <---------AHL20(2)                                                     <---------AHL20(1)                                                     <---------AHL20(2)                                                     --------->AHL20(1)                                                    --------->AHL20(2)                                                <---------AHL20(2)                                                --------->AHL20(2)                                               --------->YAB1                                              <---------YAB1                                           --------->AHL20(2) <----------DOF2                           <---------YAB1 <---------DAG2                            <---------AHL20(2)            --------->TOE2(3) ------>RAV1(1)                      ------->TEIL<---------YAB1         --------->YAB1         <----- -------ALFIN1                      <---------CCA1(2)--------->AHL20(2) ----------->GT1      -------- --->bZIP60(2)                   --------------->AtSPL8            --------->AHL20(2)        <------- --->ANAC46            ---------->DOF2  <----------DOF2    ----------->GT1                --------->WOX13(1)   acacttttttatgtgtcttcaaactcaaagtgttttttgtatctttttattaaaattaattttgtaaaaaaaaatcgtaaattggacttgatcaattacc  16179800                        --------->ZAT14          --------->YAB1                        <---------ZAT14         <---------YAB1                        <---------ZAT18       --------->YAB1        <<<<<<<<<SARD1                   <---------ANAC58          <---------YAB1         <<<<<<<<<CBP60g               <---------WOX13(1)          --------->YAB1        <---------MYB59             --------->ATHB12              <---------ICU4    --------->DOF5.7(2)     <---------AHL20(2)             <--------ATHB1               <---------YAB1   <---------ANAC55(2)    --------->AHL20(2)   <----------DOF2 <---------ANAC58       --------->ICU4   --------->ANAC55(2)    <---------ARR11(3)- ----YAB1   --------->ICU4             <---------YAB1     <-------TEIL   <----------DOF2<---------YAB1 ->YAB1     <---------YAB1          --------->ICU4  ---------->DOF2------>MYB46(1)--------->AHL20(1)< ----GT1   <---------WOX13(1)       --------->GLK1(2)--------->DAG2------>MYB83  <---------CCA1(2) --   attttcttttttgaatgattggctagtgtagttttgaaattcttattattatcaaaaagctacgttaccaaatttctttttccatatattatgaagaaga  16179900                                <------NtERF2                               <---------DEAR3(2)                               ----------->GT1                             <---------AHL20(2)       ------>ZmHOX2a(1)      <---------DEAR3(1)          --------->ARR14(2)     --------->ATHB12  <----------DOF2             --------->ETT(1)            <---------ARR14(2)    <---------AHL20(2) -------->HSFC1(2)           --------->RAP2.6(3)    --------->DAG2        --------->YAB1     <------MYB46(1) ---------HSFC1(2)   <---------DAG2                ---------->DOF2      --------->AHL20(2)  <-------- ------->GLK1(2)     <----------DOF2     <----------DOF2 <----------TaMYB80<---------AHL20(1)<------MYB83   gaagctttccttatgaactactactttttgggtcggcaaaattctttttagcaaaaagcatattcgagttctcatataatatttcattggattgtaggtt  16180000  Previous    Next  AGI:  At4g33700.1    Description:  CBS domain-containing protein. similar to CBS domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G14520.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61244.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644); contains InterPro domain Protein of unknown function DUF21 (InterPro:IPR002550) Range:  from: 16176279    to: 16179484    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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