Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <------NtERF2                                                <---------ANAC58                                                <---------ANAC46                                                <---------ANAC58                                               ------>NtERF2                                               <------NtERF2                                              --------->LBD16                                              <---------RAP2.3(1)                                             <---------RRTF1(2)                                             <---------DEAR3(1)                                             <---------RAP2.3(3)                                             <---------RAP2.3(2) --------->DOF2                     ------>ZmHOX2a(2) -------YAB1                       <------ZmHOX2a(2) -----ICU4                        <---------ARR14(2) ----HAHB4                        --------->ARR14(2) ---->ATHB12                      <-----------ARR10 ---->YAB1                        --------->ARR11(3)                                            ----- --->ICU4              ====================HOX2a_HOX2a             --------->ICU4           --------- ----ATHB12            ===================HOX2a_HOX2a   <---------ALFIN1<-----------GT1     --------- ----YAB1              <------ZmHOX2a(1)    <---------LBD16     <---------AtLEC2          <--------P ->YAB1           <---------ANAC46<---------ARR11(3)  ----------->RAV1(1)     <---------MYB52(1)-----   attacagcaaaaacaacatggagtaggaacattaccgatcttctcttgcggcgtagcaacacatttgcaagtattgacccgttttgccatgggtaagcaa  16174300                                                        <---------ICU4                                                        --------->YAB1                                                      <---------ARR11(3)                                                      --------->ARR11(3)   --------->ZAT14                          --------->ANAC58           --------->YAB1        <---------ZAT14          -                          --------->ANAC58     ------->TEIL    --------->ANAC58                   ---                        ---------->DOF2 <---------AHL20(2)     --------->ANAC46                  ---- ---->ANAC58        --------->DAG2      --------->AHL20(2)     --------->ANAC58                  ---- >ANAC58           ---------->DOF2   --------->YAB1 <---------ATHB12  <---------ZAT14          ------ >ANAC58     --------->ANAC58        --------->AHL20(2)<---------YAB1 --------->ZAT18  --------->ANAC58 ---->ANAC58 --------->ANAC58       <---------ATHB12--------->ICU4    --------->ZAT14  --------->ANAC58   gcatttcgagttctgaagccaaaaaggaaagcaaaccaataaaaaaatgaatcaatgatcatcacaagcaaatgcactgttctctggccaaacaacacca  16174400                                                                         ------->TEIL                                                                --------->HSFB2a(2)                                                                <---------HSFB2a(2)                                                                <---------HSFC1(1)                                            --------->YAB1      --------->HSFC1(1) ---------->RAV1(1)                   --------->AHL20(2)       <---------LBD16 ------>MYB46(3)                    --------->ANAC58      <---------AHL20(2) -->MYB83             <------ZmHOX2a(1)    <-------TEIL  <---------AHL20(2)                  ------>ZmHOX2a(1) -->MYB46(1)      ---------->DOF2   --------->ANAC58     <---------AHL20(1)            <-------TEIL --->AtMYB61      --------->MYB52(1)--------->ANAC46     --------->AHL20(2)     --------->AHL20(2)   tccaacatcgacttaaaaaccaaaggattgaaatttccaagtaaattcataacatacaattaatttctggaaatgaatccaatttcatattcatcctcac  16174500                                                       --------->AHL20(2)                                               --------->TOE1(2)                                              <---------At4g35610                                              --------->At4g35610                                              ----------->RAV1(2)                                              <---------ZAT2                                              =======================================bZIP_DOF                                              --------->TGA1a                                              --------->ZAT2                                             ------->TEIL                                            <---------ALFIN1                                          --------->ANAC46                            <------ZmHOX2a(1)                          ==============================bZIP_DOF                      ===============                          ---------->DOF2 --------->ANAC58                    --------->ALFIN1  <----               --------->MYB52(1)         --------->ANAC58                 --------->DAG2      <-----  --------->AHL20(2)  ----------->GT1--------->MYB52(1)<---------AHL20(2) ---------->DOF2      ------   tagattatatcagtagcaaacagagagtaaaagaaaacaaaacgacgcacctgagattaaaatttgaaggggctaagaaagtggatgaggaagaagagat  16174600                         ------>NtERF2                        --------->ANAC46                      <---------ATERF1(1)                     <---------WRKY38(1)                     <---------DEAR3(1)                     <---------ETT(2)          --------->MYB52(1)                       <---------CCA1(1)        <---------MYB52(2)                         <---------RVE1(1) ==HOX2a_HOX2a       <---------WRKY12             --------->ARR11(3) --ZmHOX2a(2)        --------->ETT(2)             <---------GLK1(2)                              <--- ----ARR11(3)    <---------MYB46(3) ------>ZmHOX2a(1)           --------->ARR14(2)       *TSS    <--- --->ARR11(3)----------->HVH21  <-----------GT1   <---------ARR11(3)             ------->TEIL   <----   catcgaagaaactaactgatgggtcgacgacatttttcctgcttcgcacaaagattttttcagacaaatttgcagagcaaatgaaccatgggagatagtt  16174700                                                                     <------MYB83                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)             ----                                                                --------->LBD16                  ----                                                          --------->MYB52(2)                   <-----                                           <------ZmHOX2a(1)  <---------LBD16                --------                                 <------MYB46(1)        <---------MYB52(1)   --------->HSFB2a(2) ----                                 <------MYB83          <---------MYB52(1) <-----------GT1    <-------     ----------->GT1            --------->MYB59       --------->LBD16<------MYB46(1)         <------- ---MYB83                       <---------AtMYB61   <---------LBD16 --------->MYB59          -------- ---MYB46(1)                  <---------MYB52(1)<---------AHL20(2)<---------MYB52(1)        <-------- -----MYB46(3)         <<<<<<<<<TBF1      ----------->GT1 <---------MYB46(3) <---------HSFB2a(2)<----   ggtgagactgataaaactagggttcttcttcggtttggtctgagaggaaattaatccggtttgttccggttcggttttactagaaatttttgggaatttt  16174800                                                                        ------>NtERF2                                                                        --------->LBD16                     *TSS                                    --------->HSFB2a(2)         <---------ANAC58       ------------>CBF                                    <---------At4g35610           <---------ANAC46 ------------->AGL1 <-----------GT1                        --------->ZAT2                <---------ANAC58 ------------->AG<---------AHL20(2)                        --------->At4g35610     --------->ANAC58 ------GT1       --------->AHL20(2)        --------->ARR11(3)<---------HSFB2a(2)   --------->ANAC58 ->HSFC1(2)     <---------AHL20(2)        --------->YAB1----------->RAV1(2)       <---------TOE2(2) -------->CBF--------->AHL20(2)           <--------ATHB1--------->ATERF1(1)     --------->TOE1(2) --HSFC1(2)  <---------AHL20(2)          <---------YAB1<---------RAP2.3(1)  --------->ARR14(2) ------ --HSFB2a(1)--------->AHL20(1)           <---------ATHB12  <---------ZAT2   <---------ARR14(2) <----- ->HSFB2a(1)<---------AHL20(2)           --------->ICU4<---------ATERF1(1) <------ZmHOX2a(1)   <----- -KAN4(2)   <---------AHL20(1)     ----------->HVH21   ------>NtERF2   --------->DEAR3(1)<---------ANAC55(2) -------GT1 --------->AHL20(2)  <---------ANAC46   ---------->CDC5  <----------ID1<---------TOE1(2)   ccaattcagttcaatttatttatttctctctctggctcggacaatgattttgctctgcgcctgctggaaaacgccgaggaatcgcacgatttcgtgaagc  16174900              <---------ARR14(2)                                                                 ----        --------->ARR11(3)                                                                       <---        <---------ARR11(3)                                                                       ----       <---------GLK1(1)                  <---------AHL20(2)                                     ----       --------->GLK1(1)                  --------->AHL20(2)                                     ----       --------->RVE1(1)                 --------->ICU4                                  <---------ANAC46      --------->ARR11(3)             --------->At5g28300                    <----------DOF2      ----      <---------ARR11(3)            ----------->GT1                         <---------DAG2      <---- --->At4g35610------->TEIL       <---------ANAC46                          <---------DAG2<---------ANAC58 ----ZAT2    <---------CCA1(2)   <---------ANAC58                   ---------->DOF2 <---------MYB46(3) ----At4g35610--------->ARR14(2) <---------ANAC58   --------->AtMYB61 --------->ARR14(2) <---------ANAC58   tgctactagatatctgtatctgagtcaattcgatttcgtggtaattaatctcgaccaatagggttctccaaaaatccccttttcgattgttgtgtgttta  16175000     <---------YAB1 ----->ANAC46 ------ANAC55(2)             <-------GAMYB                                     <--------ATHB1    <--- ----->ANAC58        <---------MYB52(1)                       <---------ANAC46 --------->ATHB12 <---- ----->ANAC55(2)   <---------ANAC46             <----------DOF2          --------->ANAC58<---------At4g35610 ----->ANAC58    --------------------->WRI1  ------->TEIL  <---------ARR14(2) <---------ATHB12  <---- ----->ANAC55(1)<---------ANAC58    ---------->DOF2        --------->ARR14(2) --------->ICU4<-------- -----TOE2(3)   <---------ANAC58  --------->ETT(2)   <---------ZAT6      --------->ANAC58--------->At4g35610   cgtaattttgtttgttttgcttcgttgatttcgttgtcgaaagaacgtagctttagtggaagttctgtgattaagaagcaatgatttagatagctgtagt  16175100 ------MYB46(3)                           --------->ATHB12 -----AtMYB61                    -------->P         --------->ANAC55(2)   <---------DAG2 -----ZAT6                     ------>ZmHOX2a(2)    <---------ANAC55(2)   <----------DOF2   <-------- -ZAT14              <----------DOF2    <---------WOX13(1)  --------->ATHB12        <-----------GT1   ggtcgaattaagttcaactccatctttgtttgatctacccagattgatttgatcacataacttgattaggcttatacttttttgttttaccttggagtag  16175200  Previous    Next  AGI:  At4g33680.1    Description:  AGD2 (ABERRANT GROWTH AND DEATH 2); transaminase. Identical to LL-diaminopimelate aminotransferase, chloroplast precursor (DAP) [Arabidopsis Thaliana] (GB:Q93ZN9;GB:O81885); similar to ALD1 (AGD2-LIKE DEFENSE RESPONSE PROTEIN1), transaminase [Arabidopsis thaliana] (TAIR:AT2G13810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49812.1); similar to unknown [Populus trichocarpa] (GB:ABK93412.1); similar to putative aminotransferase AGD2 [Oryza sativa (japonica cultivar-group)] (GB:AAR01225.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent t Range:  from: 16171697    to: 16174689    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g33690.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN61243.1) Range:  from: 16174821    to: 16176256    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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