Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->KAN4(2)                         <---------HSFB2a(1)                         <---------HSFC1(2)         --------->ANAC46--------->KAN4(1)       <---------ALFIN1  <----------TaMYB80                                            --------->ANAC55(2)       --------->AtMYB61 --------->HSFB2a(1)                                           --------->ANAC46    --------->YAB1       <---------KAN4(1)                        <----------DOF2      --------->ANAC58   --------->MYB46(3)    --------->HSFC1(2)           ---------->DOF2         <------ZmHOX2a(2)   <---------ATHB12     ---------->TaMYB80          =================================HOX2a_HOX2a --------->WOX13(1)     <---------KAN4(2)           <------ZmHOX2a(1)<---------REM1(2) --------->ANAC58 ------>ANAC46       --------->LBD16      --------->ZAT2----------->GT1      <---------ARR11(3)     < ------>ANAC58     <---------LBD16     --------->At4g35610   ---------->DOF2 --------->ARR11(3)    <- ------>ANAC58    --------->MYB52(1)   <---------At4g35610 --------->CCA1(2)--------->GLK1(1)      <-   aagcaatcaccacagcataacaccggaatattccatcgaagagctgctcggagaggaaaagataaaagctttacacagagatcatcttcaagtaatctaa  16154300                                                                          --------->ANAC58                                                                         --------->SPL7                                                                        --------->MYB52(1)                                                                       <---------SPL7                                                                      <---------MYB52(2)                                                                   <------ZmHOX2a(1)                                                             --------->ANAC58                                                             --------->ANAC58              ------------------------>ANAC81                --------->ANAC55(1)        --------->DOF5.7(2)              ----------->GT1                                <---------ANAC55(2)       --------->TOE2(3)       <------NtERF2                                         --------->ANAC55(2)       --------->TOE1(3)   --------->ANAC46                                          --------->ANAC46  --------->At4g35610 ---------RAP2.3(3)                                         <---------LBD16    <------NtERF2     <--- --------ANAC58    ---------->DOF2                        ----------->HVH21  <---------DEAR3(1) ----- --------ANAC58 <------ZmHOX2a(1)                        <-----------HVH21--------->ANAC58<---------DOF5.7(2)   tgcctgcgcagcgagagaggaaaaagagagagagagagagagagattatacatcgtggctgtcacggaaggagcgaacggcagcgagaacgttaacgaca  16154400                                                               --------->At4g35610                                                             ------>ZmHOX2a(2)                                                            <---------GLK1(1)                                                            --------->GLK1(1)                                                           <---------ARR14(2)                  ------                                                           --------->ARR14(2)                 <------                                                           --------->ARR11(3)                 -------                                                           --------->GLK1(2)                 <-------                                                           <-----------ARR10                 ------>ZmHOX2a(2)                                                           <---------ARR11(3)               <------ZmHOX2a(2)                                                           <---------AGP1                  --------->ARR14(2)                                                          <------ZmHOX2a(1)            <---------LBD16                       --------->MYB52(1)             ---------->DOF2       --------->ZAT2 --------->GLK1(2)                       <---------DOF5.7(2)         --------->ANAC58         <---------ZAT2 <---------ARR14(2) ------ZAT14          ----------->HVH21            --------->ANAC58       --------->LBD16--------->LBD16 ------>RAV1(1)     ----------->GT1         --------->ANAC46<------ZmHOX2a(2)         <---------ANAC46   acacagagaatggcgatgagagaggtaacgaggctgaagcatctacaaacaacaaggaaaggatctgctctgtttccgagcttcaatttcgcggatccgg  16154500                 <---------HSFC1(2)               <---------GLK1(2)           <------NtERF2           --------->ATERF1(1)          ------>NtERF2          --------->LBD16         <---------DEAR3(1)         <---------ANAC46         --------->ALFIN1        --------->ATERF1(1)       --------->LBD16      <---------DEAR3(1)                                                         <---------ANAC46      <---------RAP2.6(2)                                                  ------>NtERF2     <---------LBD16                                                      --------->RAP2.3(2)     <-------TEIL<---------HSFB2a(1)                                      --------->RAP2.3(3)     --------->SPL7                                                      --------->ORA47(2)   <---------ARR14(2)                                                   ------>NtERF2   --------->ARR14(2)                                               --------->GLK1(2)  <---------HSFC1(2)                                                --------->ARR14(2)  --------->HSFB2a(1)                                               <---------ARR14(2)  <---------HSFB2a(1)                                              <---------GLK1(1)  --------->HSFC1(2)         ------>ZmHOX2a(1)                    ----------->ARR10 --->LBD16<---------MYB46(3)--------->TOE2(3)              --------->LBD16--------->DEAR3(1) ---HSFB2a(2)  --------->ARR14(2)                         --------->LBD16--------->RAP2.3(1) -->HSFB2a(2)  <---------ARR14(2)   ------>ZmHOX2a(1)    <---------LBD16--------->LBD16 --LBD16<---------LBD16 <---------GLK1(1)               <---------LBD16--------->ANAC46   aagaaggtccggcgggggattcttcgatttcctcagtcctatccatctaaaaccaatttcccggtgagaaaatccgccgtcttaagtggaatttggaatc  16154600                                    <---------ARR14(2)                                   <------ZmHOX2a(1)                                  <---------YAB1                                         --------->ANAC58                              <-------GAMYB                                           <-------TEIL                             --------->MYB55(2)             --------->At4g35610 <---------SPL7                             <---------MYB46(3)          ---------->DOF2        ----------->HVH21                             <------MYB83              --------->LBD16          --------->LBD16          --------->ANAC58   <------MYB46(1)         --------->ZAT18          <---------At4g35610          --------->ANAC58 <--------P                <---------ZAT18          <---------LBD16   --------->ANAC58    <---------ANAC58              <---------LBD16      <-----------HVH21   --------->ANAC58    <---------ANAC58           --------->MYB52(2)     <----------DOF2 --------->ANAC58   ----------->GT1    <---------HSFC1(2)        <--------P  <---------At4g35610--------->MYB46(3) <-- --------->ANAC58     --------->HSFC1(2)      <---------MYB46(3)     <----------DOF2  --------->WRKY18(1) --------->ANAC58    --------->GLK1(2)       --------->ALFIN1    --------->GLK1(1)--------->SPL7-----   gagacgcgaaaaacgaaatggagaagcttgttggttaggattcagaagtggttagtgcggaaagctgaattctttctttcaccggacgttcaagccttgt  16154700                          <---------KAN4(2)                  <------ZmHOX2a(2)                   <----------DOF2--------->ZAT6  --------->AHL20(2)    ----------->GT1                --------------->AGL15           --------->AHL20(2)     <---------------AtSPL8     <--                ============================================MADS_MADS  --------------->AtSPL8 <------                <---------------AGL15           <---------AHL20(2) --------->ANAC55(2)       --------               <-----------------AGL2 --------->At4g35610   <---------ARR11(3)               --------       <<<<<<<<<TBF1     *TSS   <-----------GT1 <-----------TBP    <---------ANAC55(1)       -------- --------DOF2  <-----------------AGL1 <---------At4g35610   --------->ARR11(3)   <----------ID1  <--- ----->ID1  <----------DOF2--------->ICU4   --------------->AGL15  <---------ANAC55(2)      <--------   cttttattcttcttctttcttctttgggaatatttaactctgcttactatttttatatatcagatcattaagtgttgtacaaaaaaacaaaaaaaacgtc  16154800   --------->ATHB12 -------YAB1                              <---------RVE1(1) -----TGA1                                <---------CCA1(1)                                        -- ->ANAC46                                --------->ARR11(3)                                        -- ->ANAC58                                <---------ARR11(3)                                      <--- ->ANAC58                             --------->HSFB2a(2)                --------->GLK1(1) <---------ICU4 ---------CBF  --------->ICU4         <---------HSFB2a(2)         --------->CCA1(2)        --------->YAB1 ---STF1 ---------->ID1            <-----------GT1          --------->MYB52(1)     <---------MYB52(1)   attgttgatttgttgtaatgtttagaaatatgctatttttctagatatttttgcagtaatgctaacaggtatgcgatttctatcagttagtattcatgac  16154900                                                         <---------ARR11(3)                                   --------->ANAC46      --------->ARR11(3)        <---------ZAT14          <---------ALFIN1      <---------AHL20(2)        --------->ZAT14       --------->PCF2       --------->YAB1        <---------ZAT18       <---------TCP20     <---------YAB1                        <---------TOE2(3) ------->bZIP60(2)  --------->AHL20(2)         <---------YAB1                      ----------->GT1 ------->ANAC46     <---------ATHB51           <---------AHL20(2)                  <---------ZAT6 ------ALFIN1       <---------AHL20(2)  <---------YAB1--------->AHL20(2)    ---------->DOF2   cacatcatactgctctctctaaataattcagggctccacattacgattttttattataaaatctactagtacttataagaaagtagagttaatgaagtcg  16155000                              <---------ZAT14                              --------->ZAT14                            --------->ANAC58                 --------->CCA1(2)                            --------->ANAC58                --------->ARR14(2)                            --------->ANAC46                <---------ARR14(2)                          <---------ALFIN1     <-----------GT1        --------->ZAT2                  <---------MYB46(3)  <-----------HVH21<---------AtLEC2     ------>ZmHOX2a(1)     ---     <---------ALFIN1    --------->ZAT14      ----------->HVH21      ------>MYB83           <--------    --------->MYB46(3) --------->REM1(1)    --------->ANAC55(1)      ------>MYB46(1) ----------->GT1  --------->PCF2  ----------->GT1  --------->ZAT14    <-------TEIL <---------MYB59  <---------TOE2(3)   atgggaaccacttgggagagtggttacaacactccagtctagtcacatgtaacatgttcatggatacgacctagcttcctcttagtgaggttaaataatc  16155100                                                                                               ------                                                                                              <------                                                                                  --------->TOE1(2)                                                                                XXXXXXXXXXXXXXXXXXXXX ---------->DOF2                                 --------->ZAT6       --------->HSFB2a(2)   --------- --->ZmHOX2a(1)                 --------->AHL20(2)           --------->ZAT6 --------->AtMYB61 ------- -AHL20(2)       <---------WRKY12--------->AHL20(1)    --------->ZAT6 <---------HSFB2a(2)--------->AtMYB61   ctatagagcccattagaagtcaatgggctaacaaatatatgactggctctagctctagctctagctctagttctaaaaccaaaacccaagaccacaacaa  16155200  Previous    Next  AGI:  At4g33625.1    Description:  similar to hypothetical protein MtrDRAFT_AC148971g6v2 [Medicago truncatula] (GB:ABD28544.1) Range:  from: 16152929    to: 16154725    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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