Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ANAC46                                                                  --------->ANAC58                                                                  --------->ANAC58               <-----------GT1                   --------->AHL20(1)          <---------RVE1(1)                      <---------ARR11(3)          <---------CCA1(1)                      --------->ARR11(3)                                 <         --------->ARR11(3)     <---------ARR11(3)        <----------DOF2              <---------AHL20(2)     <-----------GT1     <---------LBD16         <---------AHL20(1)         <-------TEIL            -   tgtttttttacgatatttttcatgttattcggaatgtcttaaatcacaaaaaatattcgacttttcacaagcatcggatgcatagttgtttatttgataa  16134000                                  --------->AHL20(1)                                  <---------AHL20(2)              ----------->GT1     --------->ARR11(3)           --------->YAB1           --------->STY1(2)      <---------AHL20(1)           <---------ICU4 ---------->TaMYB80               <---------ARR11(3)          --------->ICU4              <---------- --------->ARR14(2)               --------->AHL20(2)        --------->YAB1       <------ZmHOX2a(2) <---------ARR14(2)           <---------AHL20(2)           --------->REM1(1)    <---------ARR11(3) ---------GLK1(1)            --------->AHL20(2)      <-------MYC3              --------->GLK1(1) <--- -------->GLK1(1)      ----------->GT1               ------->MYC3 --------->YAB1--------->ARR11(3)   gggtatctcccatagctagttaaaaatgttatttaatatattcgttttggtaccatatgctacaataatcatattatgcagagatcatcgaataacatca  16134100                                          --------->WOX13(1)                                         <---------ICU4                                        --------->ICU4                                        <---------ATHB12                                          ---             <-------TEIL               <---------YAB1                                        <------        ---------->DOF2               <---------ICU4                                        ---------      --------->ANAC58                --------->YAB1                                     ------>MYB83  ----------->GT1             --------->ZAT18                                       <-----------GT1 <---------TOE2(3)   ---------->DOF2 <---------ATHB12                             <-----------HVH21 --------->DAG2 ----------->GT1      --------->ICU4                              <---------bZIP60(1) -GT1 --------->ANAC58        <---------ZAT18                                    --------->bZIP60(1) ------ANAC55(2)--------->AtLEC2   --------->YAB1       --------->ZAT6<------ZmHOX2a(2)  ------>MYB46(1)   cataaggtaagaaagttcatgtaaaaagaaaatgcactaataatcattcacaaacttagcagtagattagcgatcgaaaattgatgtcaccaaatttaac  16134200                                                                                                    -                                                                                           <---------ZAT18                                                                                           <---------ZAT14                       <-----------GT1                                                     --------->ZAT14                       <---------DOF5.7(2)                                               --------->ANAC58                       --------->MYB52(1)                                                --------->ANAC46                  --------->AHL20(2)                                                     --------->ANAC58                  <---------AHL20(2)                                                  --------->MYB46(3) ------>GLK1(2)<----------DOF2                                                      <-----------GT1-- -----GT1   <---------ARR11(3)                                          <---------ZAT14--------->AtMYB61 >AHL20(2)  --------->ARR11(3) <-------TEIL       ------->TEIL          --------->ZAT14<---------ALFIN1   aatctttaaaatgacatcttttaattaacgacgttcattcggagacaaaatgaatttcatcaaaaatgagtcactaaactatttttcaaccactccacta  16134300                                          ----------->RAV1(1)                                         --------->AtMYB61                                        --------->MYB46(3)                                      --------->ANAC46                                --------->HSFB2a(1)         --------->TOE2(3)      <---------HSFB2a(1)                                              ----      <-----------GT1      --------->bZIP60(2)---------->DOF2                                  ------ ----------->GT1           --------->ANAC58 --------->MYB46(3)                          --------->ZAT6 -------->DAG2             --------->ANAC58------>MYB46(1)                         <---------ANAC58 -------->DOF2             --------->ANAC46------>MYB83    --------->AHL20(2)      <---------ANAC58   aaaaagttaaacctcattcaaaaactgccacgaaacattcccaccaacaaaagataacaaataatatagactccctcgccttgttgcttcccactacaaa  16134400                                                                          --------->ARR14(2)                                                                         ------>MYB83                                                                         ------>MYB46(1)                ------------>CBF           *TSS                        <---------MYB59               <-----------GT1          <---------MYB52(1)      <-----------HVH21    ----------->GT1                  <---------TOE2(3)         --------->O2 <---------ARR14(2)    --------->ANAC58                 <---------TOE1(3)         --------->TGA1a    --------->ANAC58 --------->YAB1 <-----------GT1            <---------O2 --------->ARR14(2) ------->GT1----------->GT1     <---------ZAT6      <-----------GT1<---------SPL7    --------->YAB1 ---->DOF2<------------CBF --------->YAB1  <---------YAB1      <---------TGA1a      <-------TEIL   agtaacaagaaaaattgttacaatactaagcatagtattaacgttatgctatatatacaaatctctcgtcggaccaaatattcgcattcatagatttcat  16134500                                                                                                   <-                                                               <---------MYB46(3)             <------                                                         <<<<<<<<<<<<<<<<<LFY                 <------                                                         <------ZmHOX2a(1)                   ------>ZmHOX2a(2)                                                      <---------ICU4                      --------->ATHB12                                                   --------->YAB1                <---------DAG2 <----        ------->GAMYB                             <---------YAB1                 ====================      <---------TOE2(3)                         <---------ANAC58                 <----------DOF2-----     --------->MYB52(1)----------->GT1          <---------ANAC58    <---------YAB1       <---------YAB1     <-----------GT1 ---------->DOF2            <---------ANAC46   --------->KAN4(2)   --------->YAB1   tacaaattaacgaactattcacagaaagaaataaaacgagatgggaagtggcatgataaggacattggttattctagcaatagctttattcatgatcggt  16134600                                                                                    ------->GAMYB            ------->MYC2                                                       --------->At4g35610            <-------PIF5                                                       <---------At4g35610            <-------MYC2                                                      --------->ANAC58            ------->MYC3                                                      --------->ANAC58            <-------MYC4                                                    --------->TGA2(2)            ------->MYC4                                                   <-----------TGA1           --------->TGA1a                                                 <-----------HVH21           <---------O2                                                   --------->ANAC58           ==================bZIP_DOF                                     --------->ANAC58           --------->ANAC46                                               --------->ANAC46           <---------PIF3(3)                                              --------->O2           <---------TGA1a                                                --------->REM1(1)   <------           --------->PIF3(3)                                              --------->bZIP60(1) <------           --------->O2                  <---------ANAC58                 <---------O2        -------           >>>>>>>>>>HY5             <---------MYB59                      <---------bZIP60(1)------>MYB46(1)           =========================bZIP_bZIP                             --------->bZIP60(2)------>MYB83         <---------ALFIN1           --------->At4g35610                   ==================MYC_MYB       <----------------PIF3(2) --------->ALFIN1                     --------->ANAC58  --------->LBD16 --------ETT(1)            --------->ARR14(2)       --------->ICU4   --------->ANAC46  <---------SPL7 ---MYB46(3)<-------MYC3  --------->TGA1a<---------ANAC58            --------->ANAC58 --------->DEAR3(1) ---DEAR3(2)------->PIF5<-----------RAV1(2)   --------->ETT(1)    <---------WRKY38(1)<---------LBD16 -----ARR14(2)    ==================bZIP_DOF<-----------HVH21     <---------WRKY12 --------->DEAR3(1) ====================bZIP_DOF<---------DEAR3(1) <------NtERF2   <-----------HVH21 >>>>>>>>>MYB2 ---->ARR14(2)    ---------->DOF2   <---------At4g35610       ------->TEIL--------->TGA1a  <---------MYB59   tccgacaacgtccacgtggcaaaagcccaggtctgtggagctaacttgtcgggactgatgaacgaatgtcaacgctacgtcagcaacgccggaccaaatt  16134700       ------>NtERF2      --------->RAP2.3(2)      --------->RAP2.3(3)      --------->DEAR3(1)     --------->DEAR4(2)     --------->ORA47(2)     --------->RAP2.3(1)     <------NtERF2     --------->ATERF1(1)    ------>NtERF2    <---------ATERF1(1)   --------->RAP2.3(3)   --------->RAP2.6(2)   ------->GAMYB   --------->RAP2.3(2)   --------->DEAR3(1)  --------->DEAR3(2)                                  <---------ANAC58  --------->MYB46(3)                            <---------ANAC58  --------->ATERF1(1)                           <---------ANAC46  --------->RAP2.3(1)                           <---------ANAC58  --------->ERF1                              ------->TEIL <---------ZAT2                             <---------SPL7 <---------At4g35610                       <---------ANAC58  <---------MYB52(1) --------->ZAT2                            --------->ANAC55(2) --------->At4g35610                       <---------ANAC58 ------>NtERF2 <---------ATERF1(1)                      <---------TOE2(3) <---------At4g35610 ---GLK1(2)                      <-----------HVH21    <---------ANAC58                   --------->YAB1 ---ARR14(2)           <---------ZAT18    --------------->AtSPL3                --------------->AtSPL8 -->ARR14(2)           --------->ZAT18  --------->WRKY12    <---------RAP2.6(3)<-----------GT1   <---   ctcagccgccgtctcggtcttgttgtgctctaatccgtcccattgacgtaccttgtgcttgccgctacgtttcaagggatgttacgaactatattgatat  16134800                                                                                    --------------->AGL15                                     --------->KAN4(2)                              <---------------AGL15                                     --------->ARR14(2)                             <---------YAB1                                     <---------GLK1(2)                              =================                           <---------ANAC46                                    <---------DAG2                          <---------LBD16          <---------YAB1              <----------DOF2                       <---------ANAC58       ----------->GT1                 <---------ANAC58                 <---------ANAC58    <---------ARR14(2)                       <---------ANAC58  <----                 <---------ANAC46   --------->HSFC1(2)                    <---------ANAC58      <----            <---------ANAC58        <---------HSFB2a(1)                   <---------ANAC58      <----            <---------ANAC58        <---------HSFC1(2)                 <----------DOF2          -----        <----------DOF2<---------ANAC58       --------->LBD16       --------->GLK1(2)           <---- ---------->DOF2 <---------ANAC58   --------->HSFB2a(1)             --------->ARR11(3)  --------->YAB1 -------ID1<---------TOE2(3) <------NtERF2  <---------LBD16         <---------ARR11(3) <---------YAB1   ggacaaagtggtttacgttgctcgttcttgcggcaagaagattccctccggttataaatgtggaagtaagtatctttcttgcttttcttattatagtttc  16134900  Previous    Next  AGI:  At4g33540.1    Description:  metallo-beta-lactamase family protein. similar to hypothetical protein OsJ_008663 [Oryza sativa (japonica cultivar-group)] (GB:EAZ25180.1); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279) Range:  from: 16130827    to: 16133963    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g33550.1    Description:  lipid binding. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT4G30880.1); similar to unknown [Setaria italica] (GB:AAP93138.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140) Range:  from: 16134443    to: 16135059    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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