Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ---------                                               ----------------------->TaNAC69(2)          --------->TOE2(3)                                          --------->ANAC58                               ------>MYB83 <------ZmHOX2a(2)                        --------->ANAC58                         --------->ZAT14 --------->CCA1(2)                     <---------ZAT14               --------->ANAC46  --------->DEAR3(1) -------->ARR11(3)                     --------->ZAT14               --------->ANAC58  --------->AtMYB61 -------->AGP1                         <---------REM1(2)      <---------At4g35610  <---------ZAT14 -------->ARR14(2)                  --------->At4g35610       --------->At4g35610  <---------ZAT18 ---------ARR14(2)              --------->GLK1(2)  ---------->ID1    --------->ANAC58 --------->MYB46(3) ---------ARR11(3)      --------->ALFIN1<---------AtLEC2<----------DOF2<---------ARR11(3)------>MYB46(1)   tagatccaagagcgaagaaggaagaagtgtagataatcttctgcacggtcttcgtctcctttacagcttccaagacattcttcagtccaccaacgttgac  16069000 <---------At4g35610 --------->At4g35610 -----At4g35610 ------>RAV1(2)                            --------->TOE1(3) ---WRKY18(1)                              --------->TOE2(3)              --------->At4g35610 ->WRKY45                 <---------ARR11(3)                           ---------->DOF2  ------->TEIL< ->WRKY12 --------->ARR11(3)         <---------ICU4        --------->ALFIN1        --------->At4g35610 ->WRKY38(1)              --------->ARR11(3)            --------->ARR11(3)<---------At4g35610     <-- >DOF5.7(2) <-----------GT1 ------>ZmHOX2a(2)       ---------->DOF2---------->DOF2 <---------At4g35610   ctgagcttcaaatatcaccataacacatgatctctccaattttgaccttaaaactaaagatgtggaaccaaaagaaagcttactgagatgaatcgagatg  16069100                                --------->ALFIN1                                <------NtERF2                              <---------ANAC58                              <---------ANAC46                              <---------ANAC58                              <---------O2                                             <---------ANAC58                             ------>NtERF2                                             <---------ANAC55(2)                             <------NtERF2                                             <---------ANAC58                            ------>NtERF2                                              <---------ANAC46                            <---------RAP2.3(1)                                        --------->ANAC55(2)                           <---------RAP2.3(2)                                         --------->O2                           <---------DEAR3(1)                                          <---------O2                          --------->At4g35610             --------->ANAC58             <---------ANAC55(1)                          <---------LBD16                 --------->ANAC58     ------------>MYB.PH3(1)     --------->ANAC58  <---------At4g35610          --------->LBD16         --------->At5g28300     --------->ANAC58  <---------ZAT2              ------->GAMYB           ----------->GT1   <------ZmHOX2a(1)   --------->At4g35610        <---------LBD16 <---------MYB52(1)<---------MYB52(1) -----------RAV1(2) ---------->DOF2              --------->MYB52(1)     --------->MYB52(1) ---------HVH21   <---------MYB52(2)             -------->P      <-----------HVH21 <-----------HVH21   ggtcaggaagccaaggctcaactaaagctgcggcgtggaaaacgatatcgcaaccggagcaagcatccgttagagaacggtaatccgttacgtctccata  16069200                                             <------NtERF2                                             ------>NtERF2                                            <---------SPL7                                          <---------At4g35610                                          <------NtERF2                                          --------->At4g35610                                          ------>NtERF2--------->ANAC58                                          --------->ATERF1(1)                                         <---------ANAC46 <-------TEIL                                         <---------ATERF1(1)          --------->TGA1a                                         <---------RAP2.3(1)          <---------O2                                        <---------RRTF1(2)------->TEIL<---------TGA1a         <------                                        <---------DEAR3(1)--------->SPL7                      <------                    --------->ANAC58    <---------RAP2.6(2)     --------->ALFIN1     --------->ALFIN1            <---------HSFB2a(2)         <---------RAP2.3(2)   --------->ALFIN1      <-------MYC2            --------->HSFB2a(2)        <---------ABI4(1)<---------SPL7----------->HVH21       <------           <---------LBD16             --------->SPL7  --------->ANAC46             ------->MYC2  <---------ZAT2    --------->ANAC58  --------->ALFIN1 --------->ANAC58             ------->MYC3 <---  --------->ZAT2  <--------P       <-----------RAV1(1)------->TEIL    --------->ANAC46    <------NtERF2  --------->At4g35610           ------>ZmHOX2a(2)    <------------------SPL14 <------ZmHOX2a(1)<-----  <---------At4g35610          <------ZmHOX2a(2)--------->AtMYB61     --------->O2  <-------MYC3 ----   ggcgagctcaacttctggaggtaagtcagagagatcgctggtgcggcggaccaatgcacgtacggagtggccacgacggaggagaacgtggcagagtcgt  16069300                              <---------ARR11(3)                              <---------ICU4                              --------->AHL20(1)                                            ---------                              <---------AHL20(1)                                       --------->ANAC58                      ----------->HVH21                                                --------->ANAC58                      --------->WRKY38(1)                                       <----------DOF2 ---ANAC58           <---------MYB52(1)                                         <---------DAG2 ---ANAC58          --------->At4g35610                                        <---------ANAC58 ---ANAC46          ----------->GT1                                 --------->PCF2     --------->ANAC46 ------ZAT18        --------->LBD16--------->YAB1              --------------------->WRI1   --------- ----SPL7          <---------DEAR3(1)    <-----------GT1       <----------DOF2 <---------ANAC58 ----->SPL7   ---------->DOF2 --------->ARR11(3)    <-----------RAV1(1)     <---------MYB52(1)    ---   gcgcctaagtaaccagtagagccggtgactaatattttcatattttctgtttctgtgttgggcatctttgggcccatcgttgcttttctaagccaagaaa  16069400                                  <---------AHL20(2)                             <---------TOE2(3)                           <---------AHL20(2)                       --------->MYB46(3)       <---------ANAC58<---------AHL20(2)                 <---------ZAT2       <---------ANAC58--------->AHL20(2)              ---------->DOF2      <---------MYB46(3)   --------->AHL20(2)  <------------CBF     ------------>CBF    <---------WOX13(1) --------->AHL20(1)     --------->ATHB12     -------->P   --------->GLK1(2)   <------------CBF    <---------AHL20(1)     <---------ICU4      --------->WOX13(1) >ANAC58           <---------AHL20(2)        <---------YAB1     <------ZmHOX2a(2)  <----------DOF2 >ANAC58           --------->AHL20(2)      --------->YAB1 --------->At4g35610  <---------ARR11(3) ------>TOE2(3)----------->GT1   --------->AHL20(2)  ----------->HVH21         <---------GLK1(2)   <-   cctctaattggttgagagggtttaattaattaatatttaatacaaacatcattgtctgaaagctggatcaaccaatagcaagattcttttgtgttttgtt  16069500                                                                             --------->ANAC46                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                            --------->LBD16                                                                         <------ZmHOX2a(2)                                                                         --------->CCA1(2)                                                                        --------->ARR11(3)                                                                        <---------ARR14(2)                                                                        --------->AGP1            ---                                    =================================================================                                    <---------------AGL15               <---------ARR11(3)        <--                      --------->ARR11(3)   <---------ANAC46             --------->ARR14(2)     ------ ----------HVH21  ---------->DOF2   --------------->AGL15              --------->At4g35610   <-------   ttgtcacatactacagataacaaagaactagtaagtttctcatttgagtgaaacaaaatttcaaattacagacagatccacgaaaatacaagatgacata  16069600        --------->GLK1(1)        <---------GLK1(1)                               --------->TOE1(3)            ------->TEIL   ---------->DOF2                                      --------->TOE2(3)            --------->ARR14(2) ------>ICU4              <---------STY1(2)           ------->TEIL                  <---------CCA1(2) ========MADS_MADS        --------->STY1(2)        --------->ANAC58             ------>ZmHOX2a(1) -------YAB1------------>CBF                       --------->ANAC58       --------->AtMYB61 --->ICU4  --------->TOE2(3)                    <---------ZAT18          --------->ANAC46<-----------HVH21 --------AGL15       ----------->HVH21          --------->ZAT18        <-----------GT1  --------->WOX13(1)   atgagtaaagaaatctcaattcggtgatagctagttcgaaacaagattagagcacgaaccttgaaacaagattacacctctcctctgtatccatcagagc  16069700                     <---------ARR11(3)                     --------->ARR11(3)                  --------------->AGL15                 ----------------->AGL3               <<<<<<<ZML2                                                       --------->AtMYB61            <---------HSFB2a(2)                                         ------>NtERF2            --------->HSFC1(1)                                       --------->At4g35610            <---------------AGL15                                <---------ARR14(2)      ---------->DOF2            ------>ZmHOX2a(1)--------->ZAT14                     --------->ARR14(2) ----------->RAV1(1)            <---------HSFC1(1)<---------ALFIN1                   --------->GLK1(2)  --------->AtMYB61            --------->HSFB2a(2)     <---------At4g35610     <---------ZAT14--------->LBD16--------->YAB1       <----------DOF2--------->CCA1(2)                     --------->ZAT14--------->ANAC46     <----   caaaatggtctttcctagaactagatatagctacactcttctgatgttcaaattttggacactgtagaatccgatgcccgagaccaccacaataagcaca  16069800                                                               <------ZmHOX2a(1)                                                              ----------->HVH21                                                          <---------ZAT2                                                     --------->At4g35610     ------>ZmHOX2a(1)                                                     <---------At4g35610 <---------ARR14(2)  ----------->HVH21                  >>>>>>>>>>>>>>>>>LFY --------->ZAT2 --------->ARR14(2) -----ALFIN1           <---------ATHB12           ---------->DOF2<-----------RAV1(2) <---------At4g35610   acccttgacaccgcttgcattagcaatggtttctgtttcttccattggaccattaagctcagcaaggacaggtggaatcctctgtttagcttcttgcaac  16069900  Previous    Next  AGI:  At4g33360.1    Description:  terpene cyclase/mutase-related. similar to cinnamyl-alcohol dehydrogenase family / CAD family [Arabidopsis thaliana] (TAIR:AT1G09490.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78410.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 16067675    to: 16069377    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g33370.1    Description:  DEAD-box protein abstrakt, putative. Identical to Putative DEAD-box ATP-dependent RNA helicase 43 (RH43) [Arabidopsis Thaliana] (GB:Q9SZB4); similar to DEAD-box protein abstrakt, putative [Arabidopsis thaliana] (TAIR:AT5G51280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78736.1); similar to putative DEAD-box protein abstrakt [Trifolium pratense] (GB:BAE71218.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66781.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014); contains InterPro domain Helicase, superfami Range:  from: 16069672    to: 16071408    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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