Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <-------TEIL                                                   <---------ARR14(2)                                         --------->ZAT2                                         <---------At4g35610           <---------ANAC58              <---------ZAT2           <---------ANAC55(1)           --------->At4g35610 <---------MYB46(3)           <---------ANAC46            <------NtERF2 --------->ZAT14           <---------ANAC58          <---------DEAR3(1)  <-----------RAV1(1)                    <----           --------->ANAC55(2)       --------->ETT(1)<---------ZAT14                            <----           <---------ANAC55(2)     <-----------HVH21 --------->ZAT18                        <--------    <---------ARR14(2)           <---------AtMYB61 --------->ARR14(2)                      <------ZmHOX2a(1)    --------->ARR14(2)        <------NtERF2----------->HVH21--------->ALFIN1               --------->ATHB12    --------->GLK1(2)       <---------DEAR3(1)  <---------ANAC46     ---------->DOF2  <------ZmHOX2a(1) -------ANAC46              <---------ANAC46---------->DOF2 <---------AtMYB61    <------ZmHOX2a(1)   tcggcgaatcgtttcgtgtcttcgattcgggcggagaggtcggagctgaagcgggtacactggtggtgaatgaaagaagagaaggagaggaaaggattgg  16066700                                                              --------->ICU4                                                          ------------>CBF                      <---------ARR14(2)                 --------->ANAC58     --------->YAB1   --------->ARR14(2)                 --------->ANAC58 -----ANAC58----------------->AGL2      *TSS      >>>>>>>>>TBF1                                 <---- -----ANAC58<-----------------AGL3    <XXXXXXXXXXXXXXXXXXXXMIR838                         ---------->DOF2 -ARR14(2)  ----------------->AGL3   ---------->DOF2 >>>>>>>>>TBF1                  <---------ZAT14   gtttcactgatgactccatttttggatttgcagagagaagaaagaagtagaagaagaagaagcaatttttgatactatgaagagagtgaagaaaaaggct  16066800                                                                                              -------                                               <------MYB46(1)                            -----------                                  <------------CBF                                      <------MYB46(1)                      <---------AHL20(2)     <---------WOX13(1)                         ----------->GT1          <---------MYB52(1)   <----------DOF2 <------MYB83                             <------MYB83  ------------>CBF   <---------AHL20(2)    --------->ATHB12<---------ANAC46            --------->MYB111(2) -------HVH21    <----------DOF2 --------->ATHB12         <---------TOE2(3)            --------->MYB46(2)   tcagagcaattcgtttgggcttttttatttgggctttattggacttgattggttttagtttacgtttaatatggcccttgatcaaaagtttggtgacaaa  16066900                                                            --------->DAG2      <---------AHL20(2)    --------->ANAC58               ---------->DOF2--------->YAB1      <-----------GT1       <---------ALFIN1            ----------->TBP --------->ANAC58 --------->AHL20(2)         --------->ANAC58   <---------bZIP60(1)      --------->ANAC58 --------->ICU4             --------->ANAC46   --------->bZIP60(1)     --------->WOX13(1)          <- --->DOF2        --------->ANAC46           ----------->HVH21       <-----------HVH21    ----------->HVH21 >HVH21  <----------DOF2  <---------ALFIN1<---------ANAC55(2)   <----------DOF2 <-------TEIL    <----   gcatttattaactttctaaactcaacttccacaccattctaaacacatgacatgacttacaaaaagcttttgtcactcaaaattcatgtcgatgacattt  16067000                                                    *TSS                                                   ------->GAMYB                                                  <---------ALFIN1                                             --------->ANAC58                                         --------->ANAC58                                         --------->ANAC58                                        --------->WOX13(1)                                      <------ZmHOX2a(2)                   ------>ZmHOX2a(1) <---------ARR11(3)                   ==========================HOX2a_HOX2a            <-----------GT1          --------->ARR11(3)        <<<<<<<<<CBP60g           --------------->AGL15        <<<<<<<<<SARD1      <---------ICU4   --------->ANAC58                          --------->At4g35610   ------>ZmHOX2a(1)   --------->AHL20(2)--------->AtLEC2                           <---------MYB52(1) ----------GT1  =============================HOX2a_HOX2a              ----------->GT1 <---------DOF5.7(2) -----AHL20(2)  ------>ZmHOX2a(1) <---------------AGL15 ---------->DOF2             --------->DOF5.7(2)   ttttcctccaaatttctcctccttataaaatacttactagatcaagcaaacaacacactaaagaaaacaaaattgttaaaactctcgttaactgaaaaat  16067100                                                                   <---------ARR11(1)          ------                                                                  <---------CCA1(2)            ------                                                                <---------ANAC55(1)         <--------                                                                <---------ANAC58            ---------                                                                <---------ANAC58            <------NtERF2                                                                --------->ANAC55(2)       <---------LBD16                               <-----------GT1                  <---------ANAC55(2)     --------->ARR14(2)                      --------->LBD16               --------->ATHB12                    <---------ARR14(2)                     ----------->GT1               --------->AHL20(2)                <---------ANAC58                  -------->P----------->GT1        <---------AHL20(2)        --------->ANAC58 <------                --------->REM1(1)             <---------YAB1    <---------ANAC46     <---------ANAC58  <------ZmHOX2a(1)  --------->ANAC46   <---------YAB1  <---------LBD16      --------->ANAC58<-------   atgaggaacattactactacaacccgaaaaatgttactacttgtgattacgattttattggggattgcgtatcatggagaagccatagcatgtccgcagg  16067200                                                                                               ------                                                                                              ------>NtERF2                                                                                             --------                                                                                            ---------                                                                                            <------NtERF2                                                                                            <--------                                                                                           <---------ATERF1(1)                                                                                           --------->DEAR3(1)      ------->TEIL                                                                        <------NtERF2  <---------------AtSPL8                                                                  --------->ATERF1(1) --->ANAC58                                  --------->ARR14(2)                          --------->At4g35610 --->ANAC58                                  <---------ARR14(2)                          --------->LBD16 -At4g35610                                 <---------GLK1(1)       ------->GAMYB       --------->RAP2.6(2) >LBD16                                     --------->GLK1(1)     <---------At4g35610   --------->DEAR3(1) ---TOE2(2)                     ---------->DOF2             --------->At4g35610      --------->ANAC46 ----RAV1(2)            <---------DAG2    <------ZmHOX2a(1)--------->ALFIN1        ---------->DOF2   taaacatgtacttagcacaatgtttgccttatctaaaagctggaggaaatccgtctccaatgtgctgcaacggacttaatagtctaaaagccgcagcgcc  16067300                                                                     <---------YAB1                                                                     --------->ICU4                                                                   <---------ICU4                                                                   --------->YAB1                                                                   -------->HAHB4                              <---------ANAC58                    <---------ATHB12                              <---------ANAC46                    --------->ICU4--------->ANAC58                              <---------ANAC58                   <---------TOE2(3) ---------->DOF2           <---------WOX13(1)                  <---------AHL20(2) ----->RAV1(2)          <---------YAB1                   --------->LBD16        --------->ANAC58    < ->DEAR3(1)         <---------ANAC58       <---------At4g35610 --------->AHL20(2)     ------->GAMYB-- >DEAR4(2)          <---------ANAC46    <---------ZAT14 --------->LBD16    <-----------GT1   <------- -At4g35610         <---------ANAC58   --------->ALFIN1 <---------LBD16--------->ARR11(3)   <--------   tgagaaagccgatagacaagtagcttgtaattgcttgaagagtgtagctaatacaatccctggaattaatgatgattttgccaaacaactccctgctaaa  16067400             <------ZmHOX2a(1)       <---------YAB1  <---------ANAC46                                      <---------ZAT18  ----------->GT1                               <--------P  <---------ZAT6                               <---------MYB52(1)  --------->AHL20(2) ---------ANAC46                        --------->At5g28300     <----------DOF2 ------->ALFIN1                      <---------ANAC46   <---------ZAT14 --------AGL15                     <---------ZAT14      --------->ZAT14              ------->MYC3 ---------AGL2      <----------DOF2--------->ZAT14<---------At4g35610 <---------YAB1 <-------MYC3  <-   tgtggtgttaatataggagtccctttctctaagactgtggactgtaacaggtagctactgcagtttctttttaatattgccgaaacatgtgtagttgtga  16067500                                                                                                  <--                                                                                                  ---                                                                                              -------                                                                                         ------->GAMYB                                                 --------->ZAT6                         --------->MYB46(3)                                                <---------ZAT14                        ------>MYB46(1)                                 <---------AHL20(2)  <---------ZAT14                   ------>MYB83                                 --------->AHL20(2)  --------->ZAT14                  --------->MYB52(1)                                --------->AHL20(2) --------->ANAC46                  --------->AtMYB61                       <---------WOX13(1)     <---------ZAT18                <---------WOX13(1)  ---- --------At4g35610------>ZmHOX2a(1)        <---------ANAC46          ---------->DOF2--------->MYB46(3)   gagcttctaactacataatcctctaattgacctatttaatttgttttgtgaacactgaacagcataaactgaaaagaagattgactaccaacggccatgc  16067600  Previous    Next  AGI:  At4g33350.1    Description:  chloroplast inner membrane import protein Tic22, putative. similar to chloroplast inner membrane import protein Tic22, putative [Arabidopsis thaliana] (TAIR:AT3G23710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61335.1); contains InterPro domain Tic22-like (InterPro:IPR007378); contains InterPro domain Chloroplast protein import component Tic22; (InterPro:IPR005692) Range:  from: 16064552    to: 16066740    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g33355.1    Description:  lipid binding. similar to LTP3 (LIPID TRANSFER PROTEIN 3), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59320.1); similar to non-specific lipid transfer-like protein [Prosopis juliflora] (GB:ABF06565.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 16067052    to: 16067823    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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