Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                -----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              ------>NtERF2                                                                                              <------                                              <----------DOF2                                 <------                                          <---------CCA1(2)                             <---------ANAC58                                      ------>MYB83                ----------->GT1       <---------ANAC58                <------ZmHOX2a(2)     ------>MYB46(1)        ------->GAMYB            ------->TEIL               <---------ARR11(3)   <---------ALFIN1     ------>ZmHOX2a(1)--------->RVE1(1)   <------               --------->ARR11(3)   --------->AtMYB61   <---------MYB59  <---------ARR11(3)  <-------       <---------ATHB12          <-----------GT1     <-----------GT1     --------->ARR11(3) ---------   acgtttccaattagtaagatcacattcttccatgttcaccatccctatctttgtttttcctaaccctcttgttaaaatctcttccatgaagcttggcgcc  16062700   <----------DOF2                 <---------ANAC58 <---------ZAT2                    <---------ANAC58 --------->ZAT2                 <----------DOF2 -->NtERF2                   <---------ARR14(2) ---->RAP2.3(3)              --------->ARR11(3) ---->DEAR3(1)               <---------ARR11(1) -NtERF2                     <---------ARR11(3) --->RAP2.3(1)               <-----------ARR10 --->ATERF1(1)               --------->ARR14(2) --->ERF1                    --------->GLK1(2)                              --------->ANAC46 ---ATERF1(1)               <---------ARR14(1)                       ------->TEIL ---RRTF1(1)          <---------MYB52(1)      <---------ANAC58  <---------ANAC58        ----------->RAV1(2) ---RAP2.3(1)       <---------MYB46(3)      <-----------GT1     <---------ANAC58      <---------ALFIN1 --RAP2.3(2)     --------->MYB52(1)--------------------->WRI1 --------->ARR11(3)     --------->MYB46(3) ->ID1    ----------->GT1   <---------CCA1(2) <---------ANAC58<---------ARR11(3)------>ZmHOX2a(1)   tccagctttgtctggttactagcggttagcaaatctttcttgtttatttcgttctcttcaacgagttcttgcatcttcactcctctcaccacctgatcac  16062800                                                                                               ------             --------->ARR11(3)                                                             ---------             <---------ARR11(3)                                                             ---------            --------->CCA1(1)                                                               ---------            --------->RVE1(1)                                                               <--------            <---------GLK1(1)                                                             --------->YAB1            <---------CCA1(1)                                                            <---------ATHB12            <---------RVE1(1)                                                          --------->WOX13(1)            --------->GLK1(1)                                                        <---------ZAT14           --------->ARR11(3)              <-----------GT1                           --------->ZAT14           <---------ARR11(3)           <---------ARR11(3)             <---------DAG2<---------ZAT18       ---------->DOF2                  --------->ARR11(3)  ----------->GT1          --------->ZAT18   atagcagtataaagatatctattagtctaagttttgatataagatttactctgcaaacaaaaatgtaaactcaccttaccttgggagtgcaatcacgaaa  16062900                        <---------At4g35610                        --------->At4g35610                     --------->LBD16                     <---------At4g35610                     --------->At4g35610                 --------->ARR14(2)                 <---------ARR14(2)                --------->HSFC1(2)                --------->HSFB2a(1)                <---------HSFC1(2)                <---------HSFB2a(1)                --------->ZAT2                --------->At4g35610      ----------->RAV1(1)    --------->MYB46(3)  --------->ZAT2                                                  ------>MYB83 ---->DOF2      <---------At4g35610                                         ---------->DOF2 >ANAC58        <---------ZAT2                                    --------->ZAT14       ------>MYB46(1) >ANAC58 ---------->DOF2<---------ZAT2                            --------->REM1(2)  --------->ANAC58 >ANAC46--------->MYB46(3)                                        <---------ZAT14    --------->ANAC58 -ANAC55(2)    ----------->ARR10                 --------->ALFIN1--------->ALFIN1  --------->GLK1(1)   agagcatccaacaaaggaagctccgctgctgaaatagactgatgaagaagggtggaagaaaatggcagtgtagagaagaaaagagaaacccaacaagact  16063000                   <---------ARR14(2)                   --------->ARR14(2)                   <---------GLK1(2)                <---------YAB1               <---------ZAT18                   <---------YAB1               <---------ZAT14              --------->YAB1               --------->ZAT14             <---------YAB1<-----------HVH21         <---------ARR14(2)              <---------ICU4  <-----------TGA1         --------->ARR14(2)             --------->ICU4  --------->YAB1      <---------ANAC58               <---------YAB1 --------->ICU4        *TSS      <---------ANAC58      <------ZmHOX2a(1)   <-----------TGA1         <---------WOX13(1)  ---------->DOF2----------->ARR10 XXXXXXXXXXXXXXXXXXXX>MIR414        <---------YAB1               <-   agattaaagcgtatcagtgcagatttggaaggagccatcttcattatcatcgtcattatcgtcatctcgtttctgaatgacaaacatttatctttcatct  16063100                                                                                  <---------ANAC46                                                                               ----------->HVH21                                                                              ------->PIF5                                                                              ------->MYC3                                                                              ------->MYC2                                                                              <-------PIF5                                                                              <-------MYC3                                                          --------->KAN4(2)   <-------MYC2                                                         --------->KAN4(1)   --------->TGA1a                                                         <---------HSFB2a(1) <---------TGA1a                                                         <----------TaMYB80  --------->ANAC46             ------>ZmHOX2a(1)                           --------->HSFB2a(1) <---------ANAC55(2)     <-----------GT1                                     <---------KAN4(1)   --------->O2 <-----------TBP              <---------TOE2(3)         ---------->TaMYB80   <---------O2----------->GT1 --------->AHL20(2)           <---------TOE1(3)         <---------KAN4(2)  <---------ALFIN1 <---------AHL20(2)    ----------->GT1           --------->ALFIN1         --------->MYB46(3)   <----- ----------TBP    --------->YAB1      --------->ANAC46<------ZmHOX2a(1)  --------->SPL7----------->GT1   tatatatatacactcctaaatcaaaatgtttaaaggtttcacgagaaatatgtgtaggaatattctttgtatgcgaaccacgtgaagggtagagaaaaaa  16063200                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                             <------ZmHOX2a(1)                                                                                         ---------->DOF2                                                                                      <-----------HVH21                                                                                   <---------TGA1a                                                                                   <---------ANAC58                                                                                   =================bZIP_DOF                   <---------------AGL15                                           <---------ANAC58                   <----------DOF2                                                 =================bZIP_DOF             <---------ICU4                                                        --------->TGA1a  <        --------->At5g28300                                                  --------------------->WRI1       ----------->GT1                           <------ZmHOX2a(1)---------->DOF2  <---------O2  <--- -----ID1   --------->ICU4  <---------TOE2(3)   <----------ID1    ===========================bZIP_DOF   acaaaaacatggtaattagtactttaagtagaggttgagtttttttgagtaggacaaaaaaaacgtctaaaagagtttacattggacgtgtcaaaggatt  16063300                                                     <---------ATHB12                                                   ------>NtERF2    <---------ICU4                                                 <------NtERF2<--------P                                                ------>NtERF2<-------GAMYB                                     ---------->DOF2 --------->MYB46(3) -->ARR14(2)                <---------YAB1  <-----------RAV1(1) <------MYB83 ---ARR11(3)                --------->ICU4--------->CCA1(2) --------->MYB55(2) -->ARR11(3)              --------->YAB1 --------->ARR11(3) <---------MYB46(3)          <---------ANAC55(1) ---GLK1(2)               <--------HAHB4 <---------ARR11(3)<---------YAB1               <---------ANAC46 ---ARR14(2)  --------->ANAC58  --------->AHL20(2)--------->DEAR3(1)--------->YAB1      --------->ANAC55(2) ----------DOF2          <---------YAB1  --------->ARR11(1)<---------TOE2(3)            <---------ANAC55(2) --------GT1  --------->ANAC58 <---------YAB1  <---------ETT(2) <------MYB46(1)        <-------TEIL   ttctttactcaaacacaagcctgatgtattattattaaacaaagatatgtcgccaacgattgtggttggataatgacatgagtttgcgatacgtatgcct  16063400       --------->ARR14(2)       <---------ARR14(2)                                              --------------->AGL15       ------->TEIL                                                    ==============================    --------->ANAC55(1)                                             <-----------GT1    <---------ANAC55(2)                                         <---------AHL20(2)    --------->ANAC55(2)                 <-----------GT1     ------>ZmHOX2a(1)    <---------ANAC55(1)        <---------PCF2               <----------DOF2   <-----------------------TaNAC69(2)<---------ICU4       ------>ZmHOX2a(2)   <-------TEIL <---------ALFIN1  <---------MYB59        <------ZmHOX2a(2)  --------->CCA1(2)        --------->TOE2(2)            <---------ARR14(2)  --------->ARR14(1)       --------->TOE1(2)            --------->ARR14(2)         <----------DOF2 --------->ARR14(2)      <---------ATHB12               --------->ARR11(3)         <---------DAG2 --------->ARR11(1)  ==================================================================MADS_MADS <---------ARR14(2)  <-----------------AGL3             <---------ARR11(3)      <-----------GT1   taagatacgtatttgctctcacctccaaacatgggaccaaaattacaatattgtaagggatcctttttatttactacatatatcactttatctcatccaa  16063500                                                            ====================RAV                                              --------->HSFC1(2)       <------ZmHOX2a(1)                                              <---------HSFC1(2)     --------->LBD16                                              --------->HSFB2a(1)   <-----------RAV1(2)                                     <---------MYB52(1)     <-----------RAV1(1)                                    <-----------TGA1  <---------------AGL15                                    <-----------HVH21 --------------->AGL15                                   >>>>>>>>>>AtTINY2 <-----------------AGL3                   --------->TOE2(3)<---------RAP2.6(3) <---------YAB1--------->ANAC46               --------->GLK1(1) <---------At5g28300 <-----------------AGL2           <-----------GT1               <---------GLK1(1) -------->P  <---------TOE2(3)      <---------HSFB2a(2)     <--------        ---------->DOF2---------->DOF2       <---------TOE1(3)      --------->HSFB2a(2)     <-------- ======================================================================MADS_MADS<----------DOF2 <<<<<   tgcaaaacccaaaagggatttcattaaaagttatctaccgtcatttgaaggttctactattaatggtgctccaggacattgacttttgttaccactttat  16063600  Previous    Next  AGI:  At4g33330.1    Description:  PGSIP3 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 3); transferase, transferring glycosyl groups. similar to PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G18660.1); similar to PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G18660.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61336.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 16060016    to: 16063074    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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