Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <-------TEIL                    ---------->DOF2       --------->WRKY18(1)             --------->At4g35610         <-----------HVH21                  --------->WOX13(1)            --------->ARR14(2)      --------->CCA1(2)                   ----------->GT1            <---------ARR14(2)    --------->YAB1             <---------At4g35610 ----ATHB12 --------->GLK1(2)<---------YAB1                  --------->At4g35610    --------->ZAT6 --->RAV1(1)<---------ARR11(3)   <---------ATHB12          <-----------RAV1(2) --------->YAB1     ---   attcgttcatacagtatctgaataaagattcatcaatgatatgggtcaaacaattttggattcagatgaacaagttgttaatcaaaacactaattctgta  16043000                                       --------->ANAC58                                       --------->ANAC46                                       --------->ANAC58               <---------ANAC55(2)                                     ----------->RAV1(1)              --------->ANAC58                                     <---------ALFIN1                <---------LBD16                                    --------->MYB46(3)               --------->SPL7         <--------ATHB1                                   --------->ANAC58              <---------------AtSPL3     ---------                                   --------->ANAC58              <---------------AtSPL8    --------->ICU4                                  --------->PCF2                ------->GAMYB  <-----------HVH21                                <---------ZAT18        <---------GLK1(2)      ----------->GT1 <------                                --------->ZAT18      <---------YAB1<---------ZAT14         <---------YAB1                          --------->AHL20(2)         ------>ZmHOX2a(1)--------->ANAC58    <---------WOX13(1)                          <---------AHL20(2)     <---------ARR14(2)--------->ZAT14  --------->ARR14(2) ------>YAB1   ------->TEIL---------->DOF2       --------->ARR14(2)<---------SPL7   <---------ARR14(2)   tcataaacatggtattgaatctgaaaaattaaagagcacccacacaattcgaatcctgattctcaacagagtacggaaacaggtcaaatctgaatgattg  16043100                                                            <------NtERF2                                                         --------->ATERF1(1)                                                         <---------PCF2                 --------->ZAT14                  <---------ANAC46                       --------->ZAT18            --------->ZAT6    <---------ARR14(2)          --------->HSFB2a(2)      <---------ABI4(2)          <-----------GT1    --------->ARR14(2)          <---------HSFB2a(2)    <---------ZAT18             <---------YAB1   <------ZmHOX2a(1)           <---------LBD16         --------->ZAT18           --------->YAB1 >ATHB12          <---------ANAC58              <---------HSFB2a(2)              <---------ICU4 ---WOX13(1)      <---------ANAC58     ---------->DOF2--------->ALFIN1----------->RAV1(2)     -------   aagaaggatacttacattttccttggaattttttctgggaagaaagtgttcttgaagtgggcaccgattcaaacctgcatccattatcactaaacacaaa  16043200                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                            --------->ANAC46       <-                                                                          <---------DOF5.7(2)      --                                                 --------->MYB52(1) --------->ICU4                 --                                              --------->ANAC58      <---------YAB1                 <-                                              --------->ANAC58   <---------AHL20(2)                <-                               --------->YAB1 --------->ANAC46 --------->CCA1(2)               ------                  --------->MYB52(1)       --------->ARR14(2) <---------ARR11(3)         --------->ICU4 --->DOF2 ------------------------>ANAC81  <---------ARR14(2) --------->ARR11(3)       ---------->DOF2   gaaaatcccaaaatacaaacaaacagaaaacaagaatagcgatagtatacgaaacggattagaagatataatgagtaaacgaaattagataaagatgagc  16043300                                                                         --------->ATHB12                                                                        --------->ICU4                                                                        <---------YAB1                                                                      <---------At4g35610                                                                    <---------ANAC46                                                                   <------NtERF2                                                                   <---------At4g35610                                                                  <---------MYB46(3)             --------->TOE2(3)                                   <---------RAP2.6(2)            <---------MYB46(3)                                 <------MYB83 --------At4g35610         --------->ZAT2                      <------MYB46(1) ------->ZAT14  ----------->GT1          <---------ZAT14       <---------MYB46(3) ------->At4g35610         <---------At4g35610                 --------->MYB52(2) --------ZAT14<---------MYB52(1)    <------ZmHOX2a(2)         <---------AtMYB61                   <-- --------ZAT2<-------GAMYB <---------ZAT2--------->ZAT14   --------->ATHB12<---------WOX13(1)<------- ->TEIL     ------>ZmHOX2a(2)     <---------GLK1(1)        <-----------RAV1(1)      --------->CCA1(2)   ctgcagagaagggatcgttagtaaattcgagcagagagatcagagcagagagagcgaagaattgttggtggctgatgattgatgagagatgagagagcag  16043400                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                   <-                                    <---------ANAC58                                              ---                                    <---------ANAC58                                   --------->YAB1                     --------->ANAC58                                               --------------->AGL15                     --------->ANAC58                                               <---------------AGL15                  --------->TOE1(2) <---------ANAC46                               <-----------------AGL1                <---------------AtSPL8                                             <-----------------AG                --------------->AtSPL3    --------->DAG2                           ----------------->AG                --------->DAG2   <--------P                                        ----------------->AGL2               *TSS <-------TEIL<-------GAMYB        ------------>CBF              <-----------------AGL2         ----------->GT1        <---------ANAC58<--------P   <---------TOE2(3)     <-----------------AGL3 -------WOX13(1)<---------------AtSPL3   ---------->DOF2     <---------TOE1(3)     ----------------->AGL3 --At4g35610  ---------->DOF2   <---------ANAC58--------->ALFIN1        <------ZmHOX2a(1)    --------   attgatgaagtgagtgaaaaggtacgaaattttgggttgcttataaaggggtagagccaatttagggttttggaggactctaatttctataatcggaaag  16043500                                          ---------->TaMYB80                                       --------->LBD16                                      <---------ANAC46    <------------MYB.PH3(1)           <---------ANAC55(2)  --------->MYB52(1)                  --------->ANAC55(2)  <---------DOF5.7(2)                <---------LBD16 ----------->HVH21                  --------->MYB52(1) -------->DOF5.7(2)              --------->WOX13(1) -----MYB46(1)                 <-----------------AGL1     --------->LBD16 -----MYB83                 --------->WRKY38(1)          --------->LBD16                  <---------TOE2(3) --------DEAR3(2)           --------->WRKY12            <---------LBD16<----------DOF2   <-----------GT1 ------>MYB59              <---------MYB52(1)           ----------->RAV1(2)             <-----------GT1 -->DOF2<----------DOF2  <---------MYB46(3)         <----------DOF2    <---------DAG2  --------->AHL20(2)   tcggtaacggctatatttctgagagagccgttgatcaattacggaaaatgccctctttccctgaaacaattagcttttttatgtctcattttaacatttg  16043600                                --------->AHL20(2)                               --------->AHL20(2)                                              ------                             --------->YAB1                                                   -------                    --------->ANAC58                       <---------YAB1                  <---------ATHB12                    --------->ANAC58                    --------->ARR11(3)              --------->ZAT6                    --------->ANAC55(1)                 <---------ARR11(3)            -------->P                    ----------->GT1        <---------AHL20(2)   --------->ANAC46   <---------ANAC58                    --------->ANAC55(2)    --------->AHL20(2) <-----------GT1      <---------ANAC58 -                    <---------ANAC55(2) --------->TOE2(3)<---------CCA1(1)--------->AHL20(2)  -------   tctattagacaaaaacagagacatgtaacaaaaataaaaaaacattaaaatacttatagatattatacaaaacaaataaaacactgcttaccactcactc  16043700    --------->ARR11(3)    <---------GLK1(2)                                                         -------->ATHB1    --------->ARR11(1)                                                        <--------HAHB4    <---------ARR11(3)                                                        --------->ATHB51    --------->ARR14(2)                                                        <---------ICU4    <---------ARR14(2)                                                        --------->YAB1 --------->AGL15                                                             --------->ICU4 -->ANAC58       --------->ATHB12       --------->ZAT6                       <---------YAB1 --------->DOF2 <---------YAB1    ----------->GT1                <----------DOF2<---------YAB1 -->ANAC58    <-----------GT1---------->DOF2                    --------->TOE2(3)          <---------   aaaaaagatactgaaataactattggtacaaaaaagaggttaacactcacataaataccacaattacctttaatctagaattattactgaaaaaaaacaa  16043800                                                                  ----------------->AGL2                                                          ------>MYB83                                                          ------>MYB46(1)                                                        <---------MYB46(2)                          -                                              <-----------GT1     <-----------------AGL3            <                                             <---------AHL20(2)  ------>MYB46(1)                   --                <-------TEIL           <-----------GT1  <---------MYB111(1)                        --           --------->DAG2           --------->YAB1      <---------MYB59                         <----          ---------->DOF2           <---------ICU4    ------->TEIL----------------->AGL3        <----    ----------->GT1    --------->At5g28300   --------->AHL20(2)  --------->AtLEC2               -----    --------->YAB1    ----------->GT1  --------->YAB1 -------->P ------>MYB83                   ----- -ID1 <---------ZAT6--------->SPL7 <---------YAB1  --------->At4g35610                          -----   atacaatagtgaaaaagtttcatacggtaaatagaccataataacaatttatcatctacctaataccatccaaaattagtttcaaattgtatacgagaac  16043900  Previous    Next  AGI:  At4g33260.1    Description:  CDC20.2; signal transducer. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G27080.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G26900.1); similar to CDC20.1, signal transducer [Arabidopsis thaliana] (TAIR:AT4G33270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65794.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70390.1); similar to hypothetical protein [Brassica napus] (GB:CAA11819.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (Inter Range:  from: 16041071    to: 16043415    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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