Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                         <---------MYB46(3)                                                                                        <--------P                                                                                       <-------GAMYB                                                      <----------DOF2                <---------TOE2(3)                                                 --------->At5g28300           <---------YAB1  ------                                            --------->ZAT14                   --------->AHL20(2) <---             <-------TEIL                   <---------ZAT14                   --------->YAB1  <------       --------->YAB1                     --------->bZIP60(1)              --------->TOE2(3)  <------      <---------ATHB12----------->GT1     --------->ANAC46              ----------->RAV1(1)   <------ -----ZmHOX2a(2)     --------->LBD16      <---------bZIP60(1) --------->TOE1(2)<---------TOE2(3) ====   gatcactaatcaaaattcatttccgagtaaaaaacacagacatcacatcactgtaacttttgtaccagcgaaacccacattaatattggggttgtttctc  16022000                                               --------->WRKY12                                      <-------MYC3                                      ------->MYC3                                     --------->O2                                     =========================bZIP_DOF                                     <---------TGA1a                                     <---------bZIP60(1)                                     <---------ANAC58                                     <---------ANAC58    <<<<<<<<<<<<<<<<<LFY             <---------ANAC46 ----------AGL15                     --------->ANAC55(2) --------->AGL15                     <---------ANAC55(2) -------DOF2   <---------CCA1(2) <-----------HVH21 <----------DOF2                                <-- -----------AGL1<---------ARR11(3)   <---------O2  <---------DAG2                            -------- -----------AGL3--------->ARR14(2)   =========================bZIP_DOF                       -------- -----------AGL2--------->ARR11(3)   --------->TGA1a                         ---------->DOF2 -------- ==============================================bZIP_DOF                     <---------AHL20(2)  -----   tttatggcccaatggctatatcttcgttgtaactaggtcacgtgagccattgacttttcgcccaatatttaagcccatttaaaggcccaatatttaagca  16022100                                                                      <---------ANAC46                                                           --------->MYB52(1)                                                          ----------->TGA1                 <---------ZAT18                                                          ----------->HVH21    --------->ZAT2                                                        --------->At4g35610    <---------ZAT2        --------->ANAC46 --------->AHL20(2)      <---------YAB1  <---------MYB46(3)       --------->ALFIN1  --------->YAB1     <---------AHL20(2)          <---------TOE2(3)    ----------->GT1    <---------MYB52(1) -------ALFIN1      --------->AHL20(2)        --------->ICU4    --------->ALFIN1        --------->LBD16 ->ANAC58        --------->YAB1            <---------AHL20(2)  --------->At5g28300    <---------LBD16 ->ANAC46       <---------YAB1           --------->ANAC55(2) <---------DEAR3(1)<---------At4g35610 -- ->ANAC58    --------->ICU4              ----------->GT1<---------At4g35610    --------->At4g35610 <- ------>RAV1(1) ----------->GT1          <---------ANAC55(2) <---------DREB2C(2)  --------->At4g35610   acactcatatacaacatgatgataaaattaaaaccgttgaagtatgtaattaagattgagatgacggtggatgtgtgaaacagctgcttccggtgtgcta  16022200                                                        --------->ICU4                          <---------YAB1              <---------ICU4                         <---------AHL20(1)           --------->YAB1                         --------->AHL20(1)          --------->ICU4                <---------ZAT2                       <---------YAB1                --------->At4g35610                --------->YAB1           <---------YAB1             ---------->DOF2               <---------MYB46(3)               <---------AHL20(2)            --------->AtMYB61             <---------DEAR3(1)              <---------ICU4         <------ZmHOX2a(1)<---------AHL20(2)<-------GAMYB                --------->ICU4     <---------MYB52(1)  --------->AHL20(2)<---------DEAR3(2)   --------->GLK1(2) ------->ZAT18  --------->ZAT2--------->AHL20(2)----------->GT1<---------GLK1(2) --------ZAT18  <---------At4g35610      <---------ORA47(1) <------ZmHOX2a(1)--------->ATHB12   gtgccccgataggaccaaagctgagaatataattgaatatgtggacggttgagttataattaggagaatctcataaatattattgaaatatcaacgatga  16022300                                                                                           <---------AHL20(2)               --------->ALFIN1                                                           <---------AHL20(2)             <------MYB46(1)                                                       <--------P             <------MYB83                                                         <-------GAMYB             <---------ANAC58                                                    --------->MYB111(2)             <---------ANAC46                                                    --------->MYB55(2)             <---------ANAC58                                                    <---------MYB46(3)            --------->MYB55(2)              <---------TOE2(3)                   --------->ALFIN1            <---------MYB46(3)             ---------->DOF2           --------->ZAT18      --------->AHL20(2)        <-----------RAV1(1)              <---------YAB1              <---------ZAT14 <------MYB46(1)  --------->ANAC58            --------->MYB59--------->ICU4         --------->ALFIN1 <------MYB83  --------->ANAC58  --------->ICU4      --------->YAB1 --------->MYB52(1)       <---------AtMYB61   aggaacgcaaatgttgggtgggataatgaagttaagtcccaatattaaagattagactaactgtttagaagtggacagagaggtggttggaatttaatac  16022400                                            --------->YAB1                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 --------->ARR14(2)                                 --------->ARR11(3)                                 <---------ARR14(2)                                 <---------ARR11(3)                                                --                   <---------At4g35610    <---------ARR11(3)                                <--------               --------->ARR14(2)--------->ARR14(3)                                       <---------AHL20(2)       <-----------TBP           <---------ARR14(3)                                      <---------AHL20(2)      <---------------AGL15      <-----------ARR10                <----------DOF2    <---------AHL20(1)      --------------->AGL15    ----------->ARR10              <----------DOF2        --------->AHL20(2)      <----------DOF2      <---------HSFB2a(2)          --------->ANAC46             <---------AHL20(2)     <-----------------AGL3--------->HSFB2a(2)        --------->TOE2(3)       <-----------GT1<-------   ------>ZmHOX2a(1) ----------->HVH21    *TSS       <----------ID1    <----------DOF2   --------->AHL20(2)   atctccttcttttataggttccactgactcgagaagatcttcgatatcatcaaaaaccacaaaactttcttttctttttctaactattttatttattatt  16022500                                                                                                    -                                                                                                  ---                                                                                                  ---                                                                                                 ----                                       <-----------RAV1(1)                                       <---                                      <---------TOE2(3)                                          ----                                <---------YAB1                                                   <---                               ------>ZmHOX2a(2)                                <---------YAB1   <---                             <---------ARR11(3)                               <---------ICU4    <---- ---->ZmHOX2a(1)             --------->ARR11(3)                          <-----------GT1      ------- -YAB1     --------->ICU4<---------ANAC58                             <---------KAN4(2)       <------ --ICU4    <---------YAB1<---------ANAC58         --------->ALFIN1<------ZmHOX2a(1)       ---------->DOF2   cctacaaaatgtcatgtttgaagtatttcttgatcttattgatgttgggactgtgtgtctccatcggaggagaattttcaatatgactacttgaaagttc  16022600                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                            ------>ZmHOX2a(2)  --------->ANAC58                                                                         <------ZmHOX2a(2)  --------->ANAC58                                                                        --------->ARR11(3) --------->DOF2                                                                           <---------ARR14(2) ------>LBD16                                                                             --------->ARR14(2) --->NtERF2                                                                           --------->LBD16 ----->ATERF1(2)                                 <---------O2                       <---------LBD16 < ------HSFB2a(2)                                 <---------TGA1a                    <---------At4g35610 ----->HSFB2a(2)                                 --------->TGA1a                    --------->At4g35610 ------ETT(1)            --------->ANAC46        --------->O2             <---------At4g35610 <------ ------LBD16   --------->At4g35610          <----------ID1                --------->At4g35610 ------- -----LBD16    <---------At4g35610      --------->YAB1                  --------->ZAT14   <---------ARR11(3) -->ARR14(2)   <---------ZAT2          <---------ZAT6                   <---------ZAT14  --------->GLK1(1) ---ARR14(2) <---------ZAT18     <---------TOE2(3)                     <---------MYB52(1)<---------GLK1(1)   cggcaagcgagtttgtgagctccataaacacaattgtggtagtgataagacaagtgagttcaattttgtctcagttcgctgatttcagcggagatcgccg  16022700 ---------ZAT14 ---------At4g35610 -------->At4g35610 ---NtERF2 ----->ATERF1(1) ----->ZAT2 ------At4g35610 ------ZAT2 ----->At4g35610                     <----------DOF2 -----DEAR3(2)                    <---------WRKY18(1) -----ATERF1(1)                 <----------DOF2                                                 ----- ->NtERF2  --------->ARR14(2)   <---------WOX13(1)              <---------At4g35610    -------------- ----ATERF1(2)                 <---------AtLEC2      <---------ZAT18                   <------------- --->DEAR3(1)               ------>ZmHOX2a(2)        --------->ZAT18                 ---------->DOF2 --->ATERF1(2)              ============================HOX2a_HOX2a             <---------ARR14(2) ----DEAR3(1)              <---------At4g35610     --------->ZAT2               --------->ARR14(2) -->DEAR4(2)              <---------ARR11(3)       <---------At4g35610          --------->GLK1(2) ------NtERF2           ----------->ARR10     <---------At4g35610        <---------At4g35610 -------- ---LBD16  <---------ARR14(2)  <---------ANAC58    --------->At4g35610<---------At4g35610    -------- -->ATERF1(1)  <---------YAB1  <---------ANAC58  <------ZmHOX2a(1) <---------At4g35610 --------->DAG2   gctgcagaatgcggtttccgattgccttgatctgcttgacttttcttcagaggagctcacttggtctgcttctgcttctgagaatccaaaaggtacctta  16022800 ----->DOF2                                         <---------YAB1 ->AtSPL8                                           ------>ZmHOX2a(1)                        -------- --AtSPL3                                          --------------->AGL15                   <--------- ->TOE2(3)                  --------->WOX13(1)     --------->TOE2(3)                <----------DOF2 ->TOE1(3)     <-----------GT1               <-----------GT1                       --------->TOE2(3)   aaggcttaaactctagtttacaacatatatcaatctctctagttttatcacatccttatagagttggaaactttgaatgcataaacctttttttaactct  16022900  Previous    Next  AGI:  At4g33220.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G43270.1); similar to Pectinesterase PPE8B precursor (Pectin methylesterase) (PE) (GB:Q43062); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 16022442    to: 16026364    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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