Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------ALFIN1                    <---------ALFIN1                  --------->ANAC46                  <---------ALFIN1                                                                <--             <---------ARR14(2)                                                                   ---             --------->ARR14(2)               ------>ZmHOX2a(1)                                ------       --------->At4g35610        <---------ALFIN1                         ----------->GT1     <-----       <---------At4g35610       <---------ALFIN1 <---------ICU4           --------->AtLEC2    <----- --------GT1<---------GLK1(2)   --------->LBD16  ------>ZmHOX2a(1)    <----------DOF2  <---------AHL20(2)   aactgtttcagctagaatccccacaactccattccccaacttcttctcctcctcatggccatttgaattcatctttcatgtaaaaacatataatctctgc  15991100                                                                             --------->TOE2(3)                                                                           <---------ATHB12                                                                          ------>MYB83                                                                          ------>MYB46(1)        ------->GAMYB                                                   <---------MYB59       --------->MYB46(3)                                               --------->AtMYB61       <---------MYB52(2)                                               ------->GAMYB -------At4g35610            --------->LBD16                           --------->MYB46(3) ------>At4g35610           <---------LBD16                           -------->P --->ZAT14            <-----------GT1         <---------ICU4         --------->WOX13(1)         <---- ----At4g35610       <-----------GT1   <-------TEIL                 --------->MYB46(3)      --------- ----ZAT14    <---------MYB52(1)     <---------GLK1(2)          <-------TEIL--------->YAB1  <--------   agatgaacaacaaacccttattttaaacaccctggaatagattcacaaacatttcatatttcgagtttcatcaaccaaacatcaaaaacccaaactttaa  15991200                                                                           <---------WOX13(1) -----TOE2(3)                                                            --------->ATHB12--------->YAB1 >TOE2(3)            --------->MYB52(1)                                 <---------AHL20(2) --DOF2            --------->MYB46(3)  <-----------GT1   <----------DOF2--------->AHL20(2)   tgtgaaactgttgaaaatcgaacaaactgggaacagaaatttaacgagttgagaaatagcttttgctcgagcgattaattgaaaactcaaatcagaacag  15991300                                           <---------AHL20(2)                                          --------->AHL20(2)                                         <---------YAB1                                       <---------ICU4                                       -------->ATHB1                                         -------                                      <---------AHL20(2)                                      <------                                      --------->AHL20(2)                             --------->ZAT18                     <------ZmHOX2a(1)--------->ICU4                             --------->DAG2             <---------ZAT14          <---------ATHB51                          ---------->DOF2             --------->ZAT14    --------->ANAC58                             --------->At4g35610        <---------ZAT14         --------->ANAC58     ----------->GT1         <---------At4g35610        --------->ZAT14      <------ZmHOX2a(1)   ---------->DOF2    ----------->GT1  <---------ZAT18   aacagaacagaacagagcagagaggaagagaggaacgcaaattattaaatccaaagtgaaaaaatgaaggcagtgatttagctaaagcgctctccaaatt  15991400                                                                           --------->At4g35610                                                                           <---------At4g35610                                                                           --------->ZAT2                      <---------TOE2(3)                                    <---------ZAT2                      <---------HSFB2a(2)                              <-----------HVH21                   --------->ICU4           ----------->RAV1(2)     <---------ANAC58                   <---------ATHB51        ------->TEIL             <---------ANAC58       --------->AHL20(2)     ------>ZmHOX2a(1)<---------YAB1       --------->MYB52(1)--------->ANAC58          --------->ANAC58 -->ARR14(2) ----------->GT1           --------------->AtSPL3--------->AtLEC2          ----------->GT1 ---ARR14(2)----------->GT1        --------->YAB1            --------->ANAC58          --------->ANAC58   tgcattcctcaagatgggaaaattatggaagaaggaatcaaaacgtacctgatgagtttgatcatgcaatgcctgtgagctggtttgtcaagaaaaaata  15991500                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                        <---------YAB1                                                                                        <---------WOX13(1)                                                                                      ----------->GT1                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                                  ------->TEIL                                              <---------ICU4                   <---------ANAC55(2)                                              --------->YAB1          --------->At4g35610 --------->AHL20(2)                                             --------->ICU4    <-----------TBP --------->ANAC55(2)                                         --------->At5g28300 <----------DOF2   <---------ANAC58                                        ----------->GT1 <---------ANAC58       <---------ANAC55(1)                                       *TSS--------->YAB1    ------>ZmHOX2a(1) <---------ANAC46  <---                    --------->ICU4     <------NtERF2<----------DOF2   ----------->GT1<---------YAB1 <             <----------DOF2          --------->ZAT18   <---------ANAC58       <---------ANAC58<-----   caagtttttttttttctttggaattagtgagttttttaggcgcagtaataatctctttccgtcctttttataagctaaattacgtatatgattaatatat  15991600                                    <---------AHL20(1)                                    <---------AHL20(2)                                   --------->YAB1                                 <---------AHL20(2)                                 --------->AHL20(2)                                 --------->AHL20(1)                            --------->AHL20(1)                            --------->AHL20(2)     --------->ALFIN1       <---------AHL20(2)   <---------ANAC58         <---------AHL20(1)   <---------ANAC58        --------->YAB1   <---------ANAC46       <---------YAB1                                                  ------>ZmHOX2a(2) ->AHL20(2)              --------->AHL20(2)                                             --------->ARR11(3) --AHL20(2)             <---------AHL20(2)                                            --------->ICU4 ->AHL20(1)             --------->AHL20(2)                               <----------DOF2<---------ARR11(3) --AHL20(1)            --------->AHL20(2)                         --------->ANAC58  <---------ICU4 ->ARR11(3)            <---------AHL20(2)                         --------->ANAC58  -------->HAHB4 --ARR11(3)         <---------AHL20(2)         --------->YAB1----------->HVH21      --------->YAB1 --------RAV1(1)    --------->AHL20(2)    <---------ANAC58 <---------bZIP60(1)     --------->ICU4 ---------RAP2.3(3)--------->AHL20(2)     <---------ANAC58 --------->bZIP60(1)     <---------ATHB51 -------CBF     ----------->GT1  <---------AHL20(1)        <---------bZIP60(2)   --------->YAB1    --   tgtgggcgtgttagcgaaagattaaattaatataatataatatttcttgttataatgtatgatgtgacaagaattctttttgttaataatgatctgtaat  15991700             <-----------GT1                          <<<<<<<<<WRKY18            <-----------GT1                         <-----------HVH21           <-----------GT1                        ------>ZmHOX2a(2)       <---------AHL20(2)                  <---------ATHB51       --------->ATHB51                  --------->YAB1       --------->AHL20(2)      --------->YAB1     ==============================HOX2a_HOX2a       <---------ICU4          <---------ICU4    --------->At4g35610      <---------YAB1           <--------HAHB4   <---------ARR11(3)       ------>ZmHOX2a(1)      --------->ICU4          --------->ICU4<---------ICU4           <---------ARR14(2)    --------->YAB1            <---------YAB1-------->HAHB4           --------->ARR14(2)    <--------HAHB4            <---------ATHB12--------->ICU4         <---------ARR11(3)   --------->ICU4        --------->ANAC55(2)--------->YAB1           --------->ARR11(3)   <---------YAB1<----------DOF2 <---------YAB1 --------->ARR11(3)  --------->RVE1(1) ------->At4g35610     <-----------RAV1(2) --------->ICU4         --------->AHL20(2)<---------AHL20(2)   cagctataattattttcccctttcttcaggtaatcatttttgttaataatgatctgtcaaaaaaaaaaaaaaatcctcgtgttcatttttttttgaaaca  15991800                                                                    <---------GLK1(1)                                                                    --------->CCA1(2)                                                                    --------->GLK1(1)                                                                   <---------ARR14(2)                                                           --------->ANAC55(2)                                                           --------->ANAC46                                                          <---------------AGL15                                                      <----------DOF2                               <----------DOF2       <---------ANAC46                               <---------DAG2   <-----------RAV1(1)--------->ARR14(2)                  <----------DOF2          --------->TOE2(3)  --------->MYB52(1)               <---------ARR11(3)        <-----------GT1 <-----------------AGL1               --------->ARR11(3)     --------->YAB1 <---------ANAC58       --------->AHL20(2)   ==============================================MADS_MADS     --------->TOE2(3)      --------------->AGL15    <---------ANAC58       --------->LBD16   gaacataacttaattaagctctttcgaaaactacttttagttataacttaatgtggctttcacataatggatatgctccgaaactatctaatgcaataga  15991900                                                                --------->AHL20(2)                ---------->ID1                                 --------->AHL20(1)               <-------GAMYB                                   <---------AHL20(1)              --------->MYB52(2)                              <---------------AGL15           -------              <---------MYB46(3)                            --------->AHL20(2)                <------          <---------TOE2(3)                              --------->YAB1    <---------AHL20(2) -------          <---------YAB1                    --------->MYB46(3)=======================================        <---------AHL20(2)        --------->O2     ----------->GT1   ----------->GT1         --------    --------->AHL20(2)   --------->ANAC46 --------->ANAC58--------->AHL20(2)               --------->YAB1    <---------AHL20(2)<---------REM1(2)   --------->ANAC58--------->AHL20(1)              <---------ATHB51   gagacattaattaagtttgttgtatacacgagaacaacgtgagccagccaatgttgtaaaaataatatatatagtatataatgccatagacaataataat  15992000  Previous    Next  AGI:  At4g33150.1    Description:  LKR (SACCHAROPINE DEHYDROGENASE). Identical to Alpha-aminoadipic semialdehyde synthase (LKR/SDH) [Arabidopsis Thaliana] (GB:Q9SMZ4;GB:O04155;GB:O04156;GB:O04884;GB:Q7DM71;GB:Q947M5;GB:Q94BT4); similar to bifunctional lysine-ketoglutarate reductase/saccharopine dehydrogenase [Gossypium hirsutum] (GB:AAN14410.1); similar to lysine-ketoglutarate reductase/saccharopine dehydr [Zea mays] (GB:NP_001104873.1); similar to hypothetical protein OsJ_008332 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24849.1); contains InterPro domain Alanine dehydrogenase/PNT, C-terminal; (InterPro:IPR007698); contains InterPro domain NAD(P)-binding; (InterPro:IPR0 Range:  from: 15985192    to: 15991539    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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