Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          --------->ARR14(2)                                          --------->ARR11(3)                                          <-----------ARR10                                          <---------AGP1                                          <---------ARR14(2)                                          --------->GLK1(2)                                         <---------ARR14(1)                           <---------ICU4                                      --------->LBD16                                 --------->YAB1                                      <---------LBD16                           --------->TOE2(3)                                    <---------LBD16                          --------->ARR14(2)                              ---------->DOF2                                <---------ARR14(2)                          --------->At4g35610                     <-----------GT1------>ZmHOX2a(1)                        <---------WRKY12 <---------CCA1(2)       <---------AHL20(2)  <---------ATHB12                      <-----------HVH21 --------->LBD16         --------->AHL20(2) --------->WOX13(1)         <-----------HVH21<---------At4g35610             ------->GAMYB      <---------ARR11(3)    <-------TEIL     --------->ANAC46<---------ANAC46  ----------->RAV1(1)  <---------CCA1(2)       -   agaagattcaatgtcactactactcgtcaactcaaagtcccgcggatctagtttgaacaacacacatttaatcgttctatatcctcaatcatctccttga  15970800                                                                                       --------->LBD16                                                                                       ------>NtERF2                                                                                      --------->ANAC58                                                                                      ------->GAMYB                                                                --------->ALFIN1      --------->RAP2.6(2)                                                                ----------->HVH21     --------->ANAC58                                                              <---------ANAC58        --------->ANAC46                                                              <---------ANAC46       --------->MYB46(3)              <---------LBD16                                 <---------ANAC58      <---------ATERF1(1)              ----------->RAV1(2)                            <------NtERF2--------->HSFB2a(2)         --------->MYB46(3)                                <---------DEAR3(1)  <------ZmHOX2a(1)  --------->GLK1(1)                              =====================================HOX2a_HOX2a <-- <---------GLK1(2)                  ----------->HVH21      ---------->CDC5<---------HSFB2a(2)     --- <---------ARR14(2)               <---------ICU4 ------>ZmHOX2a(2)    <---------MYB52(1)          --- --------->ARR14(2)              --------->ICU4--------->ARR11(3)<---------ARR14(2)--------->ARR14(2) -------->At4g35610     <---------TOE1(2)      <---------ARR11(3)--------->ARR14(2)<---------ARR14(2)   tcagattcccaacatcccctgagtcccatgttgtactgatgaccagggtgatcttcttggctcggcgtgtccgtttctcgaggagcatccgccatgttcc  15970900                                                                                                 ----                                              <---------YAB1                                    <----         <-----------RAV1(2)           ------>NtERF2       --------->At4g35610        --------->AHL20(2)      --------->REM1(1)           <---------At4g35610--------->ZAT6                   <---------AHL20(2)     <-------TEIL                 <---------ZAT2--------->ANAC55(2)     <----------DOF2       ------- ------->TEIL                     --------->ZAT2--------->ANAC46       ------>ZmHOX2a(2)      <------ -------O2                  <---------ANAC46  <-----------GT1        <---------ARR11(3)      <------- ------>ANAC46          <-----------HVH21   --------->YAB1 <---------At4g35610   <---------MYB52(1) ------>O2    <---------REM1(1)   <---------GLK1(1)--------->MYB52(1)--------->ARR11(3)    --------->YAB1   acgtagcttcatcaggttgtagcctctgtcccttggagctcggccattatacttaacagtgagatgaagatgatctttattcccttatttatatcatcat  15971000                                                                      <---------WRKY12                                                                      <---------WRKY38(1)                                                    ------>ZmHOX2a(1) <---------WRKY45                                          --------->TOE2(3) <----------DOF2                                          --------->YAB1    <---------------AGL15     <----------DOF2                     ----------->GT1    --------------->AGL15 ----->YAB1                             <---------TOE2(3)  <-----------------AGL2 -----YAB1                              <---------TOE1(3)  <-----------------AGL1 -->YAB1                              <---------AHL20(2)   <-----------------AGL3              <----- ---ICU4                             <---------AHL20(2) <----------DOF2  --------->ANAC46      <----- --YAB1                          <----------DOF2<-----------GT1      --------->WRKY18(1)    <--------   aataagactttaaaattttgaattgtatagtttctcttttttaatgttaatttcctctctttctttttttggtcaacgagactaatttagttttctttct  15971100                                      <----------DOF2                                   <-----------ARR10                                   --------->ARR14(2)                                   --------->ARR11(3)                    <---------DEAR3(1)                                   <---------ARR14(2)                   <------NtERF2                              <---------MYB52(1)  --------->ARR11(3)  <---------DEAR3(1)                         <---------O2--------->HSFB2a(1)           <---------DEAR3(1)              <-                         --------->bZIP60(1)      <---------ARR11(3) <------NtERF2                 --                         --------->O2------>ZmHOX2a(2)      --------->ZAT2                   <-------                         <---------bZIP60(1) <---------ATHB12  <-------TEIL                  --------                 --------->HSFB2a(2) <---------HSFB2a(1)    --------->HSFC1(2)         <-------GAMYB --------->STY1(1)   --------->DEAR3(2)  ------------>CBF   <---------ZAT2             <---------ANAC46 ----ANAC58      <---------HSFB2a(2)<------ZmHOX2a(2)       <---------HSFC1(2)        <---------MYB46(3) ----ANAC58    <---------At4g35610 <---------ARR11(3)      --------->ANAC58  *TSS  <-----------HVH21< --DOF2        --------->At4g35610<------ZmHOX2a(1)        --------->ANAC58<------NtERF2  -----------   tgcctagggttttcgtcttctgaaacgacgtcgttaggatctttccaatcgagttcttcccaagcttcgtcgtcgtcgtcgtctaggtcgggtgtttaaa  15971200                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                          --------->GLK1(1)                                                      --------->LBD16                                                     <---------ANAC55(2)                                                     --------->ANAC55(2)                                                    <---------LBD16 <---------TOE1(3)                           <---------TOE1(3) <---------TOE2(3)                           <---------TOE2(3) ----------GT1                          <---------ARR14(2)<---------GLK1(1) ------->MYB52(1)                       --------->ARR14(2)<----------TaMYB80 --AHL20(2)                             --------->GLK1(2)---------->TaMYB80       --------->At5g28300 ->AHL20(2)                             <-----------ARR10--------->ARR14(2)      ----------->GT1 ---------At5g28300                    <---------GLK1(2) <---------ARR14(2)     --------->LBD16     - >GT1                            <---------LBD16   <-----------GT1      --------->YAB1          <----   tttacggtttctgagttagacgagagactctcaatctcggagaatctgaggttttacgggatatcccgttttaatcaaattcagggtaaatttcaattct  15971300                       ---------->ID1                      <-----------GT1            ------>ZmHOX2a(2)           <------ZmHOX2a(2)           --------->CCA1(2)          <---------ARR11(3)          <---------AGP1          --------->AGP1 <----------DOF2          --------->ARR14(2)          --------->ARR11(3)          <---------ARR14(2)                                 ---------->DOF2         --------->GLK1(1)                              --------->TOE2(3)         <---------GLK1(1)                            <---------YAB1 --------->ID1    <---------AHL20(2)                --------->YAB1                                  < ------DOF2<---------At4g35610                --------->GLK1(2)    <-------TEIL        <---------AtLEC2   ttttccttctgagatctgattttttttcttttttttttgggtattgaaattctattatccttgaaaagcttcatacttcttaaaactttgcattgtctga  15971400                                                             <---------AHL20(2)                                         <----------DOF2 --------->AHL20(2)                                   --------->HSFB2a(2)   <---------AHL20(2)                               <----------DOF2           --------->YAB1              <----------DOF2 -------TEIL             <---------AHL20(2)         <-------TEIL                  ------->TEIL  <----   gtttcatttttgatacaatctctctatttgattctttctgcaactttggttatgttcatttatatttttagagtatcaaaaatgaatcttttagttgtct  15971500               <---------YAB1              <---------AHL20(2)                                                             ------>ZmHOX2a(1)              --------->AHL20(1)                                                             <-------  <<<<<<<<<<WRKY43                                              <---------YAB1            ---------->ID1  <<<<<<<<<<WRKY26                          <---------ANAC58 --------->GLK1(2)           <-----------GT1  <<<<<<<<<<WRKY38       <---------MYB52(1) <---------ANAC58<---------GLK1(2)           <-----------GT1 ------DOF2   <---------AHL20(1)   <---------GLK1(1)  <---------ZAT6            <-----------GT1   tttggtcatcttggattatatttctctgtttgtgatgaattctgaagcttgttgttgtgttagattcttattgtctcactgtttacatttttatcctttt  15971600                                                                      <---------PCF2            -----                                                                     ----------->HVH21   <---------WOX13(1)                                                                --------->DAG2 <---------YAB1  ------              <---------TOE2(3)                                 <---------AtMYB61      <---------MYB46(3)           --------->CCA1(2)                                    <---------TOE2(3)      --------->ATHB12          --------->ARR11(3)       --------->YAB1               <---------TOE1(3)     <---------YAB1 ---DOF2<---------YAB1     <-----------GT1      <---------GLK1(2)  --------->ALFIN1<---------ZAT6   cttaagagtgatgatataggttttttttttttctgaattatagatagatggattttcagagttgctaaggtgggacagagtattagtggtgattgcaacg  15971700  Previous    Next  AGI:  At4g33100.1    Description:  Identical to Uncharacterized protein At4g33100 [Arabidopsis Thaliana] (GB:Q9SMZ9;GB:Q680I9); similar to hypothetical protein OsI_030027 [Oryza sativa (indica cultivar-group)] (GB:EAZ08795.1); similar to Os09g0361700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062985.1); similar to hypothetical protein OsJ_027938 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44455.1); contains InterPro domain Mitochondrial distribution and morphology family 35/apoptosis (InterPro:IPR007918) Range:  from: 15971177    to: 15972492    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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