Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <------ZmHOX2a(2)                                                                                 --------->ARR11(3)                                                                                 --------->AGP1                                                                                --------->At4g35610                                      --------->ATHB12            <---------GLK1(1)                   ------->TEIL      <---------YAB1   --------->YAB1     --------->ARR14(2)      <---                  <---------CCA1(2) <<<<<<<<<<<<<<<<<LFY          --------->GLK1(1)            <-----            <---------YAB1          <---------At5g28300          --------->ARR11(3)            ------          --------->ANAC55(2)      <-----------GT1   <---------YAB1      <---------ARR14(2)   -------     ----------->HVH21     ----------->GT1     --------->YAB1  <---------YAB1   <---------At4g35610 ---->DOF2<---------ANAC55(2) <---------AHL20(2)   --------->YAB1<---------ARR11(3)           <------   agtctggctgaaacgtgattgtatctctctagttaatttaccattggaatcaaaaatcatagatgatgatatccaaatactcagatcaagaagctaatca  15970100        <---------ARR11(3)        --------->ARR14(2)        --------->ARR11(3)                              <---------------AGL15      ------->TEIL                              --------->YAB1             ------->GAMYB ------YAB1                                  --------->WOX13(1)         --------->MYB52(1)          - ----ICU4                           --------->TOE2(3)   --------------->AGL15           --------->ANAC58 --->YAB1                           --------->YAB1     <-----------------AGL3           --------->ANAC58 -->ICU4<---------ARR14(2) --------->At4g35610 <---------ATHB12      --------->TOE2(3)--------->CCA1(2) ---ATHB12     --------->ANAC46     --------->TOE1(3)  <-----------------AGL2    ---------->DOF2    <   tgaaaatgaatatctccaaggcgctaattagctcaaaaccataactccaatcacattgctaaaatcggaatccataacagcaaaaaagaaacgcgataga  15970200                                                         <---------ZAT2                                                         --------->At4g35610                                                         <---------At4g35610                                                         ----------->RAV1(2)                                                         --------->ZAT2                                                      <------ZmHOX2a(2)                                                     <---------ARR11(3)                                             <---------LBD16                                            <---------DOF5.7(2)                                           --------->WRKY38(1)                                           --------->WRKY12                <------ZmHOX2a(1)          ----------->HVH21<-------TEIL            <------ZmHOX2a(1)--------->MYB52(1)      --------->ARR11(3)                  ------>NtERF2         <------ZmHOX2a(1)  <---------ARR14(2)<---------ANAC46<-------GAMYB             --------->DEAR3(1)  --------->TOE2(3)   --------->ALFIN1    --------->DOF5.7(2)<---------ANAC46      --------->MYB52(1) -------->ARR11(3)  <---------ANAC46   <------NtERF2<---------GLK1(1)              --------->ARR14(2) ---------ARR11(3) <------ZmHOX2a(1)<------NtERF2  ----------->ARR10               <---------ARR14(2)   gagaccttagaggaggaaggaggagtgaaggaaacggaggcatcgttgacggagagatcagctgcgttgagaacgatgaaacgagtatcggcgactatgt  15970300                                                         --------->GLK1(1)                                                      --------->LBD16                                          <---------LBD16<---------GLK1(1) <---------DEAR3(1)                                          ------>ZmHOX2a(2) ------>ZmHOX2a(2)                                         <------ZmHOX2a(2) <------ZmHOX2a(2)                                        --------->ARR14(2)<---------ARR11(3)          <---------ANAC46                             --------->ATERF1(1)     <---------ANAC46     <---------ABI4(1)                             <-----------RAV1(2)     <---------DEAR3(1)   --------->ATERF1(1)                            <-------TEIL<---------ARR14(2)--------->ARR11(3) <------NtERF2                           --------->ALFIN1         <---------LBD16       --------->SPL7  <------ZmHOX2a(2)  ----------->HVH21----------->ARR10<------NtERF2    ----------->HVH21   cgagatcgatggctacagttccagtgaaggtgcaggcgatgagatcgggattgaggcggagatcgtagcgcttggggacggcgaacttgggtagacgagg  15970400                                          <---------AHL20(2)                                     <---------YAB1                                   --------->CCA1(2)                                              <--                                  <---------ARR14(2)                                           ------                           <---------ANAC46                                    --------->YAB1 -------                           <---------ANAC58                                 --------->YAB1    -------                      <---------------AGL15                              <----------DOF2=============              ------>ZmHOX2a(2)   --------->ARR14(2)       *TSS        ---------->ID1   <-------GAMYB        <---------At4g35610<---------ANAC58               <-----------RAV1(1) <---------YAB1  -------   ctcacctttgaactgatccattttctattacttgcagatatgatttttttttgttttctcttgttggagttttgtcttttataatacgagggttgtaagc  15970500                 --------->ANAC58                 --------->ANAC46                 --------->O2                 --------->ANAC58                 <---------O2                 <---------TGA1a                 --------->TGA1a                ------>NtERF2            --------->ANAC58            --------->bZIP60(1)            --------->ANAC46                      --------->TOE2(3)                                 <            <---------ANAC55(2)                   --------->TOE1(3)                                 <      <---------TOE2(3) --------->ATHB12         ----------->GT1                                    < ----------CBF <---------ALFIN1             --------->ANAC58                                        < ------>CBF <---------bZIP60(1)             --------->ANAC58                            --------->YAB1 -->ANAC58  --------->ANAC55(2)             --------->ANAC46                      --------->ZAT6   <- -->ANAC58  --------->ANAC58              <------ZmHOX2a(1)                  --------->YAB1      ---- ==========================MYC_MYB<---------HSFB2a(2)                        --------->AHL20(2)  ---- -->ANAC46<-----------GT1         --------->HSFB2a(2)--------->YAB1         <---------ATHB12     <---   aattgttttatgttacgccacgcgagtgattcgtttctagtagaggacgcaacgttaataacatttacaaaacattcaataatatcactatcaaattcaa  15970600                                     --------->ARR14(2)                                   <------NtERF2                               <XXXXXXXXXXXXXXXXXXXXXMIR833-5P                           --------->STY1(2) ---------bZIP60(2)        <---------ZAT2 ---------ANAC58           --------->ZAT2 ---------ANAC46           <---------STY1(2) ---------ANAC58          --------->ANAC58                                <---------AHL20(2) --------TOE2(3)          --------->ANAC46                            ----------->GT1 ------->TGA1             --------->ANAC58                            --------->ICU4 ------->HVH21      --------->At4g35610 <----------ID1         --------->ZAT14  --------->At4g35610 ------ATHB12       --------->GLK1(1)<---------ARR14(2)        <---------ZAT14--------->YAB1   tgacgttggattatccattagcatctccaagctaggccgaatatgacaaaatgtgttttgaccagtgaagaaatgtttaatcagattacacttgttcata  15970700                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <---------AGP1                                          <---------ARR14(2)                                          --------->ARR14(2)                                          <-----------ARR10                                          --------->GLK1(2)                                          --------->ARR11(3)                                         <---------CCA1(2)                            <---------ICU4                                      <---------LBD16                                 --------->YAB1                                      --------->LBD16                           --------->TOE2(3)                                    <---------LBD16                          <---------ARR11(3)                              ---------->DOF2                                --------->ARR14(2)                          --------->At4g35610                     <-----------GT1------>ZmHOX2a(1)                        <---------WRKY12 <---------ARR14(1)      <---------AHL20(2)  <---------ATHB12                      <-----------HVH21 --------->LBD16         --------->AHL20(2) --------->WOX13(1)         <-----------HVH21<---------At4g35610             ------->GAMYB      <---------ARR14(2)    <-------TEIL     --------->ANAC46<---------ANAC46  ----------->RAV1(1)  <---------CCA1(2)       -   agaagattcaatgtcactactactcgtcaactcaaagtcccgcggatctagtttgaacaacacacatttaatcgttctatatcctcaatcatctccttga  15970800                                                                                       ------>NtERF2                                                                                       --------->LBD16                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                --------->ALFIN1      ------->GAMYB                                                                ----------->HVH21     --------->ANAC58                                                              <---------ANAC58        --------->RAP2.6(2)                                                              <---------ANAC58       --------->MYB46(3)              <---------LBD16                                 <---------ANAC46      <---------ATERF1(1)              ----------->RAV1(2)                            <------NtERF2<---------HSFB2a(2)         --------->MYB46(3)                                <---------DEAR3(1)  <------ZmHOX2a(1)  --------->GLK1(1)                              ------>ZmHOX2a(2)    <---------MYB52(1)          --- --------->ARR14(2)                 ----------->HVH21      ---------->CDC5--------->HSFB2a(2)     --- <---------GLK1(2)                <---------ICU4 =====================================HOX2a_HOX2a <-- <---------ARR14(2)              --------->ICU4--------->ARR11(3)<---------ARR14(2)--------->ARR14(2) -------->At4g35610     <---------TOE1(2)      <---------ARR11(3)--------->ARR14(2)<---------ARR14(2)   tcagattcccaacatcccctgagtcccatgttgtactgatgaccagggtgatcttcttggctcggcgtgtccgtttctcgaggagcatccgccatgttcc  15970900                                                                                                 ----                                              <---------YAB1                                    <----         <-----------RAV1(2)           ------>NtERF2       <---------At4g35610        --------->AHL20(2)      --------->REM1(1)           <---------ZAT2--------->ANAC46                      <---------AHL20(2)     <-------TEIL                 <---------At4g35610--------->ZAT6     <----------DOF2       ------- ------->TEIL                     <---------GLK1(1)--------->MYB52(1)  ------>ZmHOX2a(2)      <------ ------>O2                  <---------ANAC46  <-----------GT1        --------->ARR11(3)      <------- ------>ANAC46          <-----------HVH21   --------->YAB1 --------->At4g35610   <---------MYB52(1) -------O2    <---------REM1(1)   --------->ZAT2--------->ANAC55(2)  <---------ARR11(3)    --------->YAB1   acgtagcttcatcaggttgtagcctctgtcccttggagctcggccattatacttaacagtgagatgaagatgatctttattcccttatttatatcatcat  15971000  Previous    Next  AGI:  At4g33090.1    Description:  APM1 (AMINOPEPTIDASE M1). similar to peptidase M1 family protein [Arabidopsis thaliana] (TAIR:AT5G13520.1); similar to hypothetical protein OsI_006262 [Oryza sativa (indica cultivar-group)] (GB:EAY85029.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73668.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43840.1); contains InterPro domain Peptidase M1, membrane alanine aminopeptidase; (InterPro:IPR001930); contains InterPro domain Peptidase M1, membrane alanine aminopeptidase, N-terminal; (InterPro:IPR014782); contains InterPro domain Peptidase M1, puromycin-sensitive aminopeptidase (InterPro:IPR015568) Range:  from: 15965744    to: 15970459    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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