Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------DAG2                                       <----------DOF2                                    <-----------GT1                                  <---------ANAC58  --------->AHL20(2)                                  --------->ANAC55(2)                                  <---------ANAC58  <---------ICU4                                  <---------ANAC55(2)                                --------->AHL20(2)  --------->YAB1          --------->ANAC58      <-----------GT1     --------->ATHB51          --------->ANAC46   <---------ICU4         <--------ATHB1                 <---------At4g35610          --------->ANAC58  --------->AHL20(1)     --------->ICU4          --------->YAB1           -         ------->TEIL       --------->AHL20(2)     <---------ATHB12      <---------ARR11(3)    ------    <---------AtLEC2        <---------AHL20(2)     <---------ATHB51  --------->YAB1--------->At4g35610 ---------DOF2             --------->AHL20(2)    --------->YAB1     <-------TEIL   ----------->RAV1(2)   tcttttgcatgaacgcaaacacttacaaaaaaaattacttactttttcttacaataatttcatgaagaaattcataatcttcatcatctgcctcactaaa  15917600      <---------ZAT18                                                                             ---      <---------ZAT14                                                                           -----      --------->ZAT14                      --------->AHL20(2)                        <----------DOF2      --------->ZAT18     ----------->RAV1(1)                                        --------->TOE2(3) <-------TEIL <------ZmHOX2a(2)        --------->AHL20(2)                         <XXXXXXXXXXXXXXXXXX -------->CCA1(2) --------->MYB46(3)<-----------GT1    --------->DAG2   ----------->GT1         ----- ---->DOF2   <---------ARR11(3) <---------AHL20(2)    ---------->DOF2  ----------->GT1  --------->YAB1   agattcagagcactagatcaacaaatagcaacattttataactaaataaacaaaccaaaagttgtattatcgaggggaaaaatacaactttaatattcaa  15917700                                           ------>NtERF2                                         --------->ATERF1(1)                                        <---------ZAT2                                        --------->ZAT2                                   <---------ETT(1)                                        <---------At4g35610                          ------>ZmHOX2a(2)                                        <---------ATERF1(1)                         <------ZmHOX2a(2)                                        --------->At4g35610                        <---------ARR11(3)                                       --------->ARR14(2)                          --------->ARR14(2)                                   ------->TEIL                                    <---------ARR14(2)                                   --------->SPL7                         --------->ARR11(3)                                   <-------TEIL                           <---------ARR11(3)                                 <---------SPL7                          <---------CCA1(2)                                --------->ANAC58              <---------ARR14(2)   <---------ARR14(3)                                --------->ANAC55(2)           --------->GLK1(2)    --------->ARR14(3)                                <---------ANAC55(2)           ------->TEIL<---------ARR11(1) ------->DOF2                   --------->ANAC58              --------->ARR14(2)   --------->AGP1 ---->ANAC58        --------->ALFIN1   <---------ARR14(2)  --------->ANAC58        <-----------ARR10- XXMIR857          <------ZmHOX2a(1)--------->ANAC46       --------->ANAC58        --------->ARR11(3) ---->ANAC58---------->DOF2    <---------------AtSPL8      --------->ANAC46  <----------DOF2 --------   gaaagaagaagttgaaaagaaggagggccaaatcacgtacggagctgcctctgtttatgacacgaatccattttcatatctttaagatcttccgaccaaa  15917800                       --------->ARR11(3)                       <---------ARR11(3)                         <-----------RAV1(1)                       --------->GLK1(2)   --------->TOE2(3) --------->AHL20(2)              --------->GLK1(2)         <----------DOF2      <---------AHL20(2)               -------  ----------->GT1 --------->ANAC58   <-----------GT1     --------->AHL20(2)               ------->TEIL --------->DOF2   --------->ANAC58--------->YAB1         <---------AHL20(2)          --------->CCA1(2) ->AtMYB61--------->YAB1         <---------AHL20(2)     --------->AHL20(2)      ---------->DOF2   aaaaaagataaatcagaatcaagaaaatcttatatataatcactttcttaaaatgtcatttatttaaaatgttgttcatagagaaagagatgaatctagt  15917900                    ----------->GT1          ---------->DOF2                                    <----                --------->ARR11(3)    ------------------------>ANAC81                      --------->ZAT14                --------->AHL20(1)   --------->GLK1(1)                                     <---------ZAT14               --------->AHL20(2)    <---------GLK1(1) ---------->DOF2                --------->ZAT14       ---------->DOF2          --------->GLK1(2) --------->GLK1(1)              <---------At5g28300 ---->GT1  --------->AHL20(2)  <---------GLK1(2)  <---------GLK1(1)             <-----------GT1 -----   aaaattatctaaagaaaatatatggttgaaacagaatcgaaatccaaaaaagaaatccaaagacatgaagaagaccgatgtgttactgtttactacagag  15918000                                                                             <---------AHL20(2)                                                                           <---------AHL20(2)                                                                         --------->AHL20(2)      <---------ICU4                                                     <---------AHL20(2)     <---------ATHB12                                                  --------->AHL20(2) --------->ZAT14                                                       <-----------TBP --------->ZAT18         --------->AHL20(2)                <---------AtLEC2--------->AHL20(2) <---------ZAT14        --------->AHL20(2)               <---------AHL20(2)<-----------TBP <---------ZAT18      <----------DOF2             <-----------GT1      <---------AHL20(2)           - -----ZAT14  <-------GAMYB                     *TSS      <-----------GT1 <-----------TBP       <----- ---->ZAT14 <-----------RAV1(1)              --------->REM1(1)       <-----------TBP------->TEIL ----   aagtgcactcatttctgttgcaggctttaaattagggaagagaccctacattttactatttacatgtctctatatatatatatatgtatgtgtctctatt  15918100                                                                                                   <-                                                                                                  ===                                                                                                 <---                                                                                                 <---                                                                                ----------->GT1  ====            ----------->GT1                              --------->YAB1        --------->DAG2   <----      <---------AHL20(2)                                <---------YAB1   <----------ID1         -----     --------->AHL20(2)                               <---------ICU4     ----------->GT1        ----- <---------AHL20(2)                                   --------->YAB1    ----------->GT1   ----------- -------->AHL20(2)                                   --------->ICU4---------->DOF2 ---------->DOF2--- ------TBP---------->DOF2                            <---------ATHB12  ------------------------>ANAC81 ----->YAB1--------->DAG2                 <---------At4g35610   --------->YAB1---------->DOF2 -------   tataaaattttataaagttataagaaaatggtgttgtcttcttgtgctggtttcaattatcacaaatcagaaagagggaaaaaagtaaagaagggtgaga  15918200        --------------->AGL15        <---------------AGL15       ----------------->AGL1       <-----------------AGL2                                                         <----------DOF2       ----------------->AGL3                                                   --------->O2 ---------DOF2                                                                  =================bZIP_DOF ======================HOX2a_HOX2a                                              <---------TGA1a ---ZmHOX2a(2)                                        <---------DAG2            <---------O2 ------RVE1(1)                                        ====================================bZIP_DOF ======================HOX2a_HOX2a                    <----------DOF2       <---------ALFIN1 -----ARR11(3)                                       <---------ANAC58      --------->MYB46(3) ---->ARR11(3)  =============================HOX2a_HOX2a       ===========================bZIP_DOF ---->AGP1    <---------TOE2(3)                      <---------ANAC58    <-----------GT1 >GT1<-----------GT1                             <---------ANAC58  <----------DOF2<---------CCA1(2) --->ZmHOX2a(2) <------ZmHOX2a(1)                <---------ANAC58  =======================bZIP_DOF ---->ARR10   <---------TOE1(3)       ------>ZmHOX2a(2)        <----------DOF2  --------->TGA1a   tcttttttagccatttaaggagaattgatgagatgtgtgatccatttgggttcttgctttttcttctttcttttctcaccactcgtgtctttgtattgtg  15918300                       ------->TEIL                                                         ---------                    <---------ANAC46                                                       <---------YAB1                    <---------ANAC58                 <----------DOF2                <----------DOF2                    --------->ANAC55(2)       --------->ANAC55(1)                  <---------DAG2                    <---------ANAC58          <---------ANAC55(2)                 <------------------                    <---------ANAC55(2)       <---------ANAC58                   ---------->ID1 -----                   <---------TOE2(3)          --------->ANAC46               <---------ANAC58  <-----           <-----------GT1<---------AHL20(2)  --------->ANAC55(2)            <---------AtLEC2 <------          <---------CCA1(2)                   <---------ANAC58               <---------ANAC58>>>>>>>>       ----------------------->TaNAC69(2)    <---------TOE2(3)       <---------ATHB12    ------------   <---------CCA1(2)<---------ANAC55(1)     <-----------GT1        --------->WOX13(1)    <----------DOF2   ccatcaaatcttatatccatttacgtatttttttcatataagttttttacgtaagctttacaaaaatatcaatcaatttgcttggccttttctttgattg  15918400                                                                         <---------YAB1                                                              <---------ANAC58                                                              <---------ANAC58                               --------->AHL20(2)             --------->ANAC55(2)                           --------->AHL20(2)                 <---------ANAC46                       --------->AHL20(2)                     <---------ANAC55(2)           <---------YAB1  <---------AHL20(2)                 <---------ANAC55(1)     --------->ICU4           --------->ICU4 <---------AHL20(2)                <-----------GT1         -------->HAHB4 <----------DOF2   <---------AHL20(2)                     <-----------HVH21         <---------ICU4 >ATHB12 --------->YAB1<---------AHL20(2)              <---------ANAC46--------->YAB1 <---------YAB1 ------ANAC81      --------->AHL20(2)                  --------->ANAC55(2)         <---------ATHB12 ---->KAN4(2)     <---------AHL20(2)                   <---------ANAC55(1)<---------ICU4 ----MYB46(3) <---------YAB1  <---------AHL20(2)    <---------MYB52(1)<---------YAB1--------->YAB1 ---WOX13(1) --------->AHL20(2)<---------AHL20(2) <---------ANAC46 --------->ICU4  --------->ICU4 >ARR2  <---------YAB1<---------AHL20(2)         ---------->ID1   <----------DOF2 <---------TOE2(3) --------->WRI1<---------AHL20(2)  <---------AHL20(2)  <---------ANAC55(2)--------->YAB1           --   ttcctttcttatcatttttatttatttatttatttattttaagttcaatgtgtcgttatgtgttacgtctttattatcatggctaatgatgatggaattg  15918500  Previous    Next  AGI:  At4g32980.1    Description:  ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1); transcription factor. Identical to Homeobox protein ATH1 (ATH1) [Arabidopsis Thaliana] (GB:P48731;GB:Q7X9S7); similar to BLH1 (embryo sac development arrest 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G35940.1); similar to BLH1 (embryo sac development arrest 29) [Arabidopsis thaliana] (TAIR:AT2G35940.3); similar to BLH1 (embryo sac development arrest 29), transcription factor [Arabidopsis thaliana] (TAIR:AT2G35940.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO43789.1); contains InterPro domain POX (InterPro:IPR006563); contains InterPro domain Homeodomai Range:  from: 15914725    to: 15918047    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version