Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ANAC46             --------->REM1(1)      --------->YAB1   ------>ZmHOX2a(1) ------>ZmHOX2a(2) --------ARR14(2)     <----------DOF2 ------->ARR14(2)     --------->TOE2(3)                                                             - --->At4g35610   --------->LBD16                                                                ----- ----ZAT2    <---------ALFIN1                                        <------NtERF2   --------------->AGL15 ----->RAV1(2)  --------->ANAC46                 --------->ANAC46   --------->ANAC58 <---------------AGL15 --->ZAT2   --------->ZAT14                    --------->ANAC46     --------->ANAC58----------------- ----At4g35610 --------->ANAC46           --------->AtMYB61   --------->MYB52(1)    <---------------- ----RAV1(2)<---------ZAT14            --------->ANAC46    --------->At4g35610      -----------------   tgatcctatcaaactacaccgcaactttagtatatagaatcacaccaaaacaccacatagcagcaatcggaggcaaattcaaaatttccgattagagaaa  15902900                                                                     ------>NtERF2                                                                    --------->DEAR3(1)                                                                  <---------ATERF1(1)                                                                  --------->LBD16                                                                 --------->TOE1(2)                                                                <---------LBD16                                                                ------>ZmHOX2a(2)                                                               --------->ARR14(1)                                                               <------ZmHOX2a(2)                                                               --------->CCA1(2)                                                              --------->AGP1                                                              --------->ARR11(1)                                                              --------->ARR11(3)                                                              <---------ARR11(3)             --------                                                              --------->ARR14(2)             --------                                                              <---------AGP1              --------->MYB52(1)                                       <---------ANAC58       <---------ARR14(2)       --------->TOE2(1)                                       <---------ANAC46     ----------->ARR10     <---------ALFIN1 ---------->GT1                        <---------ANAC58   <---------MYB52(1)     <---------ZAT18 ----->DOF2                       ----------->HVH21     --------->ANAC46       --------->At4g35610 >AG                            ----------->RAV1(2)  <---------ARR14(2)      --------->MYB46(3) -AGL2                     --------------->AtSPL3    --------->ARR14(2)    <<<<<<<ZML2 --------->TOE1(1) >AGL1 --------->AHL20(2)  --------->ZAT6            <---------ARR11(3) --------->HSFB2a(2)<---------LBD16   aagagtcaaataaacagagactagtcgtaacagtacctgatgcctgtaattccaatatccgctagatccggcgactagaacagcccacctagtaccggag  15903000                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                             <------NtERF2                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                          --------->ATERF1(1)                                                                                          --------->RAP2.6(3)                                                                                         <---------ATERF1(1)                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                       <------NtERF2                                                                                      <---------ATERF1(1)                                                                                      --------->LBD16                                                                                     <---------DEAR3(1)                        --------->ANAC58                                             <---------ANAC46                  --------->ZAT2                                                    --------->ATERF1(1)                  <---------At4g35610                                               <---------LBD16                  <---------ZAT2                                                    ------>NtERF2<---       <---------DEAR3(1)                                                           <------NtERF2---- <---------GLK1(2)--------->At4g35610                   --------->YAB1            <---------DEAR3(1) ------------->WRI1     --------->ANAC58 --------->TOE2(2)            <------ZmHOX2a(1)--------->ATERF1(1) ->LBD16 <------NtERF2<------ZmHOX2a(1)  --------->TOE1(2)         <---------ICU4<---------LBD16-----   ttagaatcgtcgtcgttttcagcaggacggaagaagcgagaagcctgcgaagggagtttgataacatcatcaggaccgcttctcgcggcggagacggcaa  15903100                                          <-------MYC4                                          <-------MYC3                                          -------->ABF1                                          ------->MYC4                                          ------->MYC2                                         --------->ANAC55(2)                                         <---------ANAC55(2)                                         --------->O2                                         --------->TGA1a                                         <---------O2                                <------NtERF2                               <---------ATERF1(1)                               --------->MYB52(1)                              --------->DEAR3(1)                              ----------->HVH21                             --------->ATERF1(1)                            --------->YAB1                             --------->RAP2.3(1)                           --------->ICU4                             --------->DEAR3(2)                            <---------YAB1                             --------->ORA47(2)                     <---------ANAC46                             <------NtERF2------->MYC3             --------->ATERF1(1)                            ------>NtERF2<--------ABF1             <------NtERF2                            <---------ATERF1(1)                   --------->LBD16                           --------->DEAR3(1)                     <---------ATERF1(1)                           <---------DEAR3(1)                     <---------DEAR4(2)                         <---------ATERF1(1)                      ------>NtERF2 ------>TOE1(2)         <---------DEAR3(1)<-------MYC2           <---------ATERF1(2)                - ------>TOE2(2)        --------->SPL7----------------->PIF3(1)   --------->DEAR3(1)   --------->GLK1(2) ---->GAMYB           <------ZmHOX2a(1)  <---------TGA1a         --------->ATERF1(2) <---------GLK1(2) ------MYB55(2) ---------->DOF2------>NtERF2<-----------HVH21    <---------DEAR3(1) <------ZmHOX2a(1) ----->MYB46(3) ===================================bZIP_DOF <---------MYB52(1)<---------YAB1 <------- --->P      <----------ID1--------->ATERF1(1)   <---------YAB1  <---------LBD16--------->ATHB12    <-   ccagcgagactaagagaacaaagaggacgacgccgacggagacacgtgtcatcgttgtggccattagccggcgagtgatgatgataggaatctttttaat  15903200                                                                       --------->ANAC58             <---------AHL20(1)                                        <---------ANAC55(2)             --------->AHL20(2)                                        --------->ANAC46         <----             --------->AHL20(1)                               <---------AHL20(2)                <---- ------>NtERF2                                            --------->AHL20(2)                  <------ --------->LBD16              <---------At4g35610   ------->MYC3       --------->ANAC55(1)    <------ -------->DEAR3(1)   ------->TEIL  <---------WOX13(1)   <---------ANAC46            <------------CBF --AHL20(2)  <---------AHL20(2)  --------->ATHB12   <-------MYC3       --------->ANAC58   <---------RVE1(1) --------LBD16<---------AHL20(2)<---------YAB1     <---------O2        *TSS---------->DOF2<---------CCA1(1)   cgccgggctatcaaataaaattgaatctttttatctgattggagagaacagacacgttgtttatataatgaacacgcaaaagctagaattggatatttac  15903300                                                                                                <----                                                                                                <----                                                                                                <----                    <---------AHL20(2)                                                          <----                   <---------AHL20(1)                                                           -----          <---------YAB1                                       --------->MYB52(1)               <---- -----ANAC58       --------->ARR11(3)             >>>>>>>>>CBP60g       <----------ID1       <------- -----ANAC58       <---------ARR11(3)             >>>>>>>>>SARD1      --------->DAG2        <-------GAMYB ---AHL20(2)   ----------->GT1            <----------DOF2 ---------->DOF2<------ZmHOX2a(1)  <-------- -----GT1 ----------->TBP                 --------------------->WRI1 ---------->DOF2        ---------   ttgtttagttttataaatggatatatttgcacatttagacatttctttggaaatttggacaaaagaaaccgaaaaggacatattttgaaaattcagttgc  15903400      <---------ANAC58      <---------ANAC58 <-----------RAV1(1) <---------bZIP60(2) <---------REM1(1) -----ANAC58 -----ANAC55(2)              <---------MYB52(1) -----ANAC58               <---------ANAC46 -----ANAC55(1)            <---------ANAC58      <---------TOE2(3) ---->ANAC55(2)            <---------ANAC58    ---------->DOF2 -----ANAC46               --------->MYB52(2) <---------YAB1                --------->ATHB12 --MYB52(1)               <-------TEIL      --------->YAB1                  --------->ATHB51 -At4g35610            <---------MYB46(3)  <---------YAB1                  <---------YAB1         <-- >At4g35610        --------->ATHB12    <---------ANAC46        --------->AHL20(2)     <----------DOF2   gtgatgttgcttccttcttaaacattggttcgtgagttatggagtattataaaggaatttgtcaaaaaaatggacacattattgaattctttcatttgtt  15903500                                                                     ---------->DOF2                                                                     ================================                                                                 --------->AtLEC2            <-------                                              ---------->DOF2  --------->YAB1                <-------           ----------->GT1                ---------->DOF2      <---------ICU4      --------->ANAC58  --------->GLK1(1)<----------ID1  ----------->GT1           --------->GLK1(2)     --------->ANAC58 ---------GT1    ---------->DOF2 ---------->DOF2     --------->TOE1(2)    ----------->GT1    <-------   tcacaaatcccatgagtaaaaaagacgagtctttgaaaagaaaaaaaagaaagaacatgagagaatcatgccaaaggagaaaaataagcactatttcttg  15903600        ==============================bZIP_DOF        --------->O2        <---------O2        <---------TGA1a        --------->TGA1a        ==============================bZIP_DOF    <-----------HVH21 <---------ICU4 =================bZIP_DOF             ---------->DOF2                    --------->YAB1 --ANAC58                            --------->YAB1               --------->AHL20(2) --ANAC46                  <----------DOF2  <---------YAB1        <---------AHL20(2) --ANAC58         <---------TOE2(3)  --------->AHL20(2)          --------->AHL20(2)      <---------WOX13(1)   tgatcatgtcaagtgtgtttaagtttgaactttgaacaataaaaagatgatttagttttgaaactaaattaatctataatgaagtttttggattgactat  15903700                                                                          <---------AHL20(2)                                                                          --------->AHL20(1)                                                                     <---------MYB59                                                          --------->AHL20(2)     <------MYB46(1)                                  --------->AHL20(2)  --------->AHL20(2)     <------MYB83 <------ZmHOX2a(2)                  --------->AHL20(2)   <---------AHL20(1)  <---------MYB52(1)                               --------->YAB1<------ZmHOX2a(1)                ---   ttctgtttggtttagatgggatcaatttgttttcggactaaattcactactaaaaataaaaaatataggagcctaatttattccaaattttagataaatc  15903800  Previous    Next  AGI:  At4g32940.1    Description:  GAMMA-VPE (Vacuolar processing enzyme gamma); cysteine-type endopeptidase. Identical to Vacuolar-processing enzyme gamma-isozyme precursor [Arabidopsis Thaliana] (GB:Q39119;GB:Q93VM0;GB:Q9SB73); similar to ALPHA-VPE (ALPHA-VACUOLAR PROCESSING ENZYME), cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT2G25940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70603.1); similar to asparaginyl endopeptidase (VmPE-1) [Vigna mungo] (GB:BAA76744.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43774.1); contains InterPro domain Peptidase C13, legumain; (InterPro:IPR001096) Range:  from: 15900273    to: 15903271    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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