Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <------MYB83                                               ----------->GT1                                               <---------MYB46(3)                                               <------MYB46(1)                                              <---------AtMYB61                                              --------->ALFIN1                                              <---------DEAR3(1)                                             <---------------------WRI1                                            <---------ANAC58                                            <---------ANAC58                     --------->ANAC46 ---         <---------ARR11(3)                 <---------ANAC46                   --------->ZAT6     ---         --------->ARR11(3)      <---------GLK1(2)                             --------->ANAC46   <--       ----------->ARR10   <---------YAB1  <---------MYB46(3)                <-----------GT1      <-- --RAV1(1)      <----------ID1 --------->AHL20(2)                 <---------ATHB12               ----   agtctcagtaagattttagagacaaaaacatgataaattctcgtttgggtggtgagaactgagaggcaaacattcaaatttacaccacaaatctctcaat  15880600                                                                                       <---------YAB1                                                                                --------------->AGL15               --------->TOE2(3)                                                =====================              --------->MYB46(3)                                                <---------------AGL15             -------->P                                                       <-------TEIL            --------->WOX13(1)                                                --------->ZAT18          <---------ATHB12                        <----------ID1              --------->ZAT14 ------>AHL20(2)                         <---------ZAT18                      <---------ZAT18 ------>AHL20(1)                         --------->ZAT18                      <---------ZAT14 ------- -------AHL20(1)                         <---------ZAT14                  --------------->AtSPL8----- -------AHL20(2)        <-------TEIL     --------->ZAT14                 ---------->DOF2 ---------->DOF2 ----->AHL20(2)--------->YAB1  --------->ANAC46 ---------->DOF2     ---------->DOF2    <---------TOE2(3)   tttatttgccaaatcaaccatagacatacatataagaaacttgtgcactataaagccaaacacttacacttaaagcaaagtacactattaagaaagaatc  15880700                                       --------------->AGL15                                       <---------------AGL15                              --------->TOE2(3)                             --------->REM1(1)                       --------->ARR11(3)            --------->At4g35610                       <---------ARR11(3)---------->DOF2                  --------->MYB52(1)  ----------------->AGL3         <----------DOF2 ------>ZmHOX2a(2)      ---------->DOF2 <----------DOF2<----------DOF2       ----------------->AGL1   ----------->GT1 ======================================================MADS_MADS                                  --- -->GLK1(2)   <---------At4g35610     ----------------->AGL2--------->GLK1(2)                     --- ---->YAB1    --------->At4g35610     ----------------->AG <---------GLK1(2)                  <------   agactttgactctttgagcttaactgatcttacatcaataaccaaaagaagaaagagctcagaatttgtaatttgtttagtttcaagttttccaattcac  15880800        --------->bZIP60(1)                                                    ----------->RAV1(1)   <---------At4g35610                                                        <----------ID1   ----------->RAV1(2)                                    --------->AHL20(2)--------->ANAC46  --------->MYB52(1)                                --------->LBD16         --------->ANAC58 ------>ANAC58                                 ---------->CDC5              --------->ANAC58 ------>ANAC58                                ------>ZmHOX2a(1)             ------------------------>ANAC81 -----GT1                                    --------->TOE2(3)         ---------->DOF2   tagccaactgatgccattcggaagttttgatcaaactagactcaattcctcagcccgagataaattttgacaaaaaagaagcaacaaaactaagaacaaa  15880900                                                                                               ------                                                                                              <------                                                                                              <------                                                                                            ---------                                                                                 --------->ARR14(1)                                                                                 --------->CCA1(2)                                                                                --------->ARR11(1)              ----------->GT1                          ----------->ARR10    --------->O2  --------->LBD16             --------->ANAC58                       <---------ANAC46      ----------->RAV1(1) -------             --------->ANAC58             <---------ANAC58     --------->HSFB2a(2) --------->ANAC58           --------->MYB52(1)             <---------ANAC58     <---------HSFB2a(2) --------->ANAC58        ---------->DOF2        <---------ICU4      <------NtERF2       --------->ANAC58  --------->HSFB2a(2)     ------->GAMYB            <---------ATHB12   <---------DEAR3(1)    --------->ANAC58  <---------HSFB2a(2)   ttatcaacagaaaagacggaaaataagtcgaaatcaataccatagcttgaggctgcgaagagtttcgagacgaaggccacatgatacgcttctggagatt  15881000                                                                                              <------                                                                                              <------                                                                                           <---------DOF5.7(2)       <------NtERF2                                                                     --------->DOF5.7(2)      ----------->RAV1(1)                                                               --------->At5g28300      ------>NtERF2                                                                    --------->TOE1(3)     <----------ID1                                                                    --------->TOE2(3)     ----------->HVH21                                                                 ------->GAMYB --->GLK1(2)                                                                          <------------AtMYB77 ---GLK1(2)                                                                         <-----------GT1 ---ARR14(2)     ---------->DOF2                               ----------->GT1--------->TOE2(3) <---- -->ARR10    <----------ID1 <----------DOF2          --------->YAB1      --------->At4g35610 -------- -->ARR14(2) <------ZmHOX2a(1)              *TSS    <---------YAB1  --------->CCA1(2)<---------At5g28300   ctccaaggcgacagaggaacaaagctaagcctttaaaatcgaatgcccatgagtatgatgaagaagggagataagagcagccttagtaaccgtaaacgtc  15881100        <---------ARR11(3)        --------->ARR11(3)                              --------->LBD16       <---------CCA1(2)                               --------->HSFB2a(2) --------->ALFIN1                                      <---------HSFC1(1) -----TGA1                                       <-------TEIL -----HVH21                       <---------ANAC46     <---------HSFB2a(2)      ---------->DOF2 -------RAV1(2)       --------->MYB52(1)         ------->TEIL          ------------>CBF <-----------GT1 ->ANAC46    <---------YAB1 ------>NtERF2 <----------DOF2       <-------TEIL--------->YAB1--------->ZAT6   agggtgttcatatctctgattacaaaacgacgcgttgtttggggcttaatgtacattctggaaaaatacatggtccaattagaaaagttttaacagtata  15881200                                                        <------NtERF2                                                      <---------ANAC58                                                      --------->bZIP60(1)                                                    <-----------HVH21                                                   <-----------RAV1(1)                                              <----------DOF2                                           <---------ANAC58                                           <---------ANAC58                        --------->ARR11(3) <---------ANAC46            <------MYB46(1)                     <---------GLK1(2)--------->ANAC46<---------ANAC58 <------MYB83               <---------YAB1       --------->MYB52(1)<---------bZIP60(1)            --------->ZAT14             <-----------GT1 --------->HSFB2a(2) <---------At5g28300  <---------AtMYB61            --------->ICU4   <---------HSFB2a(2)<-----------GT1<---------DAG2        <---------ZAT14       ----------->GT1  <---------ARR11(3)<-------TEIL<---------O2 <-----------RAV1(1)   --------->ARR14(2)      <---------TOE2(3)--------->RVE1(1)  --------->ABI4(2)*TSS<----------DOF2     --------->ANAC46 <   tagctactaatgtaattactatagaatatctctcgaacacacggtgcgttttactgtcgtcgctcctttttgttggtctgtttccacttcagttcttctc  15881300                                                                                            ---------                                                                                           <-------GAMYB                                                                                           --------->ATERF1(1)                --------->TOE2(3)                                                          <------NtERF2            --------->MYB46(3)                                     <---------ANAC46       <---------MYB46(3)            --------->REM1(1)                                     <---------LBD16        <---------DREB2C(2)       --------->ANAC58            ------->GAMYB              ---------->DOF2            <---------ANAC46       --------->ANAC58           --------->MYB46(3)  <---------ZAT2--------->LBD16      <---------DEAR3(1)      --------->DAG2             --------->RAP2.6(3)  --------->GLK1(1)               <-----------RAV1(1)     ---------->DOF2            --------->MYB52(1)    <---------At4g35610          <---------ARR14(2)  --------->LBD16            --------->TOE1(3)        --------->ZAT2------>NtERF2  --------->ARR14(2) --------->HSFB2a(2)  >>>>>>>>>RAP2.2                 <---------GLK1(1)<--------P  --------->GLK1(2) <---------HSFB2a(2)  --------->TOE2(3)     <-----------GT1--------->LBD16        <---------GLK1(2) ---------LBD16 ------->GAMYB--------->TOE2(3)        --------->At4g35610     <---------LBD16   cctccggaaaagctacaaccccaatctaaaaccctaacggccatttctaccatcggagctccgaaaatgccgggtatgtcttcggaatctggcggtggag  15881400                                                                                                    <                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                           ------>ZmHOX2a(1)                                    <----                                 --------->ALFIN1                                             <------                                <---------MYB52(1)                    <---------ZAT14         -------                               --------->LBD16                        --------->ZAT14        <-------GAMYB                             <---------LBD16                         <-----------HVH21   ------>ZmHOX2a(1)                   ----------->GT1     <---------ARR14(2)          --------->LBD16       --------->LBD16                  --------->ANAC58     --------->ARR14(2)        <---------LBD16        <---------LBD16 >ALFIN1          --------->ANAC58    <---------CCA1(2)  <------NtERF2<-------TEIL     ----------->RAV1(2)   aattggttctgttttcgaccaaggaaaaaactccggtgttgtatcctctaagctatggcctcaagtctccggttcacaggctctccatctcctggggttg  15881500  Previous    Next  AGI:  At4g32900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03010.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03010.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44014.1); contains InterPro domain Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833) Range:  from: 15878737    to: 15881044    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g32910.1    Description:  similar to nucleoporin [Lotus japonicus] (GB:BAF45348.1); similar to putative nucleoporin Nup75 [Oryza sativa (japonica cultivar-group)] (GB:BAD87530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44018.1); contains InterPro domain Nucleoporin, Nup85-like (InterPro:IPR011502) Range:  from: 15881259    to: 15885419    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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