Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 <--- <---------ATHB12                                                      <---------AHL20(2)        <--- ----->MYB83                                                         --------->ANAC55(2)         ---- ----->MYB46(1)                                                     <---------TOE2(3)            ---- ------->WOX13(1)                                              <---------AHL20(2)                <--- ------>MYB46(3)     --------->ATHB12                          --------->AHL20(2)                <--- ---ZAT18     --------->WRKY12   <-----------GT1           --------->AHL20(2)                   <---- -->ZAT14   <-------MYC3   <---------TOE2(3)     XXXXXXXXXXXXXXXXXXXX>MIR2112-5P                <---- -->ZAT18   ------->MYC3  <-----------GT1   --------->ZAT18<---------AHL20(2)      ----------->HVH21   ccaatcaatttccacgttgacattgatttaacatttcacatttgtatgcactaatacgaatataaatatttatgtaattctctccctgatagagaccagg  15848000        ------->GAMYB       --------->MYB46(3)                                                                    -------- ---->ZmHOX2a(2)                                                                            <-------- ------>GLK1(1)                                                                             --------- -------GLK1(1)                                                                            ------>MYB83 ----ZmHOX2a(2)                                                                            ------>MYB46(1) ------AGP1                                                    <---------DAG2            <---------MYB111(1) --------ARR10                                           --------->YAB1                  --------->AtMYB61 ----->ARR11(3)                                          --------->ANAC46            <---------MYB55(2) ----->ARR14(2)                                  --------->AHL20(2)                  --------->MYB46(3) ------ARR11(3)                                  --------->YAB1<----------DOF2      ------->TEIL ------ARR14(2)            ----------->GT1      <---------ATHB12                 --------->ANAC58 -----GLK1(2)          --------->ARR14(2)       <---------ATHB51                 --------->ANAC58 --ZmHOX2a(1)    --------->YAB1               --------->WOX13(1)                 --------->ANAC46 ---   atctcatcaacagtccgaatcaacatataggctaaaaataggcgaaaccaattatacaaacacaacttttgcatttgctatacacgaaccaccaaatcgg  15848100                                 <------ZmHOX2a(2)                                <---------ARR14(2)                                --------->ARR14(2)                              --------->DEAR3(1)                              --------->MYB46(3)                            --------->MYB52(1)                                                      <                          <---------MYB55(2)                                                       <-                          --------->MYB46(3)                                                     <--- ->RAP2.6(3)----------->GT1------->GAMYB                   <---------KAN4(1)                   <----- -ARR14(2) <-------TEIL <-----------GT1                    --------->KAN4(1)               ========== >ARR14(2) <-----------------------TaNAC69(2)             <---------KAN4(2)                <------ZmHOX2a(1) -------->RAV1(1)  ----------->GT1   --------->AtLEC2    --------->YAB1        <---------ZAT6<XXXXXXX   caacaatatcaaattcgtaaatcgtataaccaccgatccatgaaaatgtcgatttcaaagaataatcgatggaatcgtatagagatagagagaggaagta  15848200          --------->HSFB2a(2)        ================================HOX2a_HOX2a        <------ZmHOX2a(2)                                               ------>MYB83       <---------ARR14(2)                                   --------->ARR14(2)       --------->ARR11(3)                        <---------MYB59      --------->AtMYB61             -      --------->GLK1(1)                         --------->ANAC55(2)   <---------MYB111(2)           - <---------LBD16                                <---------ANAC55(2)   <---------ALFIN1              - ---------ANAC46                           --------->HSFB2a(2)       --------->MYB46(3)    ------>NtERF2 --------LBD16                             <---------HSFB2a(2)  ------>ZmHOX2a(1)         --------->ANAC46 ------SPL7                          --------->ARR11(3) <---------ZAT2<---------MYB111(1) --------->bZIP60(2) ----------AtSPL8                    <---------ARR11(3) --------->ZAT2--------->MYB46(3)  --------->ANAC58 ==============HOX2a_HOX2a       <------ZmHOX2a(1)   --------->MYB46(3) ------>MYB46(1)   --------->ANAC58 XXXXXXXXXXXXXXMIR831   --------------->AGL15  <-------TEIL <---------ARR14(2)          <---------ALFIN1   gtacggggagatcgagaatgtaatcgctcaaatgaggaacatcttcgagtacataaccagcaggtccttccaccaacttaatctgctcgtccacgccatt  15848300                                                    --------->DAG2                                                <---------ANAC46                                                --------->ANAC55(2)                                                <---------ANAC58                                                <---------ANAC55(2)                                                <---------ANAC58                                                --------->bZIP60(1)                                                <---------bZIP60(1)                                               ----------->STF1                                              <---------TGA2(2)                                             ----------->TGA1                                             ----------->HVH21                                            <-----------HVH21                          <---------YAB1   --------->LBD16  --------->At5g28300    ------->TEIL                        <---------At4g35610--------->At4g35610          <---------ANAC58 -------->ANAC58    <---------YAB1         <---------At4g35610          <---------ANAC58 -------->ANAC46--------->TOE1(3)        <---------LBD16   ----------->GT1     ------->TEIL -------->ANAC58--------->TOE2(3)  <-----------GT1 ---------->DOF2      <---------ANAC46     <-------   agaagccatcgaagaaaaccttattcttctgagtgtttttctctccggtgacgtaaagcgactgtgaatttgaagcgtatgtatgtatgtgagttttaat  15848400                                         --------->O2                                         =================================bZIP_DOF                                         --------->TGA1a                                         --------->DEAR3(1)                                         <---------O2                                         --------->bZIP60(2)                                         <---------TGA1a                                         --------->bZIP60(1)             <---------LBD16                                   --------->DAG2                   --------->YAB1                                  =================bZIP_DOF        <---------YAB1    <---------ZAT2                ---------->DOF2          <---------MYB52(1)                      <-    --------->At4g35610    <------ZmHOX2a(1)              --------->At5g28300                     <--    <---------At4g35610   <---------MYB52(2) *TSS    ----------->HVH21--------->CCA1(2)           ---    --------->ZAT2       --------->ANAC58<---------bZIP60(1)   <----------DOF2                   ---- --AHL20(2)              --------->ANAC58<---------bZIP60(2)   <---------DAG2             --------->MYB52(1)   tctcagagctcagagtggtatagaagtaaggaacgagaaagcgacgtcgttttggctcaccgttactttatgatatacggacattaccgaaataccagcg  15848500               ---------->ID1              <-----------GT1         <------MYB83         <------MYB46(1)       <---------ANAC46      <------NtERF2      --------->ATERF1(1)      <---------At4g35610      <-------GAMYB      <---------ZAT2      --------->At4g35610     <---------DEAR3(2)     <---------RAP2.3(1)     <---------MYB46(3)     --------->MYB55(2)     ------>NtERF2                                                                             <-----     <---------ATERF1(1)                                                                    <--------     <---------ERF1                                                                        --------->ARR11(3)    <---------DEAR3(1)                              <---------LBD16                        <---------ARR11(3)    <---------RAP2.6(2)                            <---------ANAC58                        <---------    <---------RAP2.3(3)                            <---------ANAC46                       --------->YAB1    <---------RAP2.3(2)                     <------------CBF                          --------->AHL20(2) --------->ANAC46               --------->LBD16--------->ATHB12                       <---------AHL20(2) --------DOF5.7(2)              XXXXXXXXXXXXXXXXXXXX>MIR869.2                  --------->ARR11(3)  -- -------ARR14(2)              <---------LBD16<---------WOX13(1)                <---------ARR11(3) <-- ------>ARR14(2)       ------------>CBF <---------At4g35610                 --------->AHL20(2)<------ ----->DOF5.7(2)  <----------DOF2<---------MYB52(1)<---------ANAC58     ----------->GT1--------->YAB1   taaacggcggctggtttttccttttgtcaatttccggttttcagataattgattcgtggataaatgcagaagtatggataaaatctcattaattatcttt  15848600                                                     --------->ANAC55(2)                                                     --------->ANAC58                           -----                                                     --------->ANAC58       <---------------AGL15                                          --------->TOE2(3)                 --------------->AGL15                                          --------->YAB1                   <-----------GT1     ------     <----------DOF2                    --------->ARR11(3) <---------AHL20(1)                  <-----    --------->TOE2(3)                   <---------ARR14(2) --------->AHL20(1)                 ------- <-----------GT1                        <---------ARR11(3) --------->ARR11(3)               --------- ----YAB1                               <-----------ARR10  <---------ARR11(3)      <------MYB46(1) -YAB1                                 --------->RVE1(1)   --------->AHL20(2)      <---------ANAC58 --GT1  ---------->DOF2                --------->CCA1(1)   <---------AHL20(2)      <---------ANAC58 - ------->YAB1             --------->AHL20(2)         --------->ANAC46      <-----------------AGL3   - -------YAB1              <---------AHL20(2)       <-----------GT1         <-----------------AGL2   - ----DOF2       <----------ID1    --------->YAB1<---------ICU4  --------->TOE2(3)  <------MYB83------   attatacctttaaagaaaatgacaaaaattaaacgataagaatatcttaatatttacgaaatatattcttagtaatttctctatttggtgtcaaaaatat  15848700        <-----------GT1 ---->CCA1(2)                    <---------AHL20(2)                                               --- --->AHL20(1)                  <---------RVE1(1)                                                  <-- ----AHL20(1)                 <---------GLK1(2)                                                   --- -->AHL20(2)                  --------->ARR11(3)                                               ------ >AHL20(2)                    <---------ARR11(3)                                              <------ -------->ANAC46            <---------TOE2(3)                                                <------- -------->ANAC58  --------->AHL20(2)                                                         -------- -------->ANAC58  <---------AHL20(2)                          --------->ARR14(2)       ----------->GT1 --->ARR11(3)   <----------DOF2<---------CCA1(1)<---------ICU4<---------ARR14(2) ---------->DOF2 <---   ataggcaatttttctattctttaatttcttaagattttttttttttaaaatcattttttcttagtatatggtattgttcatgacaaagagagaaatatca  15848800  ------>ZmHOX2a(1)                                      --------->ANAC58 ------>ARR11(3)                                  <---------ICU4 -------ARR14(2)                                  --------->YAB1 ------>ARR14(2)                                 --------->ICU4 --->YAB1                                      --------->YAB1                           --------->TOE1(3) ---YAB1                                     --------->AHL20(1)                        --------->At4g35610 --ARR11(3)                  --------->ATHB12--------->AHL20(2)                        <---------At4g35610 ->ARR11(3)           --------->YAB1        --------->YAB1    <---------TOE2(3)   <---------YAB1 ------CCA1(2)     --------->YAB1     ----------->GT1    --------->ANAC58    ----------->GT1   tatcctgttgagaaatagcatttataaaaactgatttgttttgtaaaaataataatgtcaagctaatgtatagatcgaatagttattttagcttaaaaat  15848900  Previous    Next  AGI:  At4g32840.1    Description:  phosphofructokinase family protein. similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT5G56630.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G29220.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43755.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74837.1); contains InterPro domain Phosphofructokinase-core; (InterPro:IPR015913); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023); co Range:  from: 15844784    to: 15848445    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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