Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <------ZmHOX2a(1)                               --------->ANAC46      --------->MYB59                                   --------->ANAC58     <---------ICU4                                     --------->ANAC58    --------->ICU4                                     --------->LBD16  --------->YAB1                                      --------->ANAC46  <------------ATHB5                                 --------->TOE2(2)  <---------ICU4                                     <---------LBD16                               --  <--------ATHB1                                     --------->TOE1(2)                          -----  <--------HAHB4                                  <-----------GT1                               -----  --------->ATHB12                              <---------AHL20(2)                             ------  --------->ATHB51          <---------ICU4  <---------AHL20(2)                                ------- <---------ATHB51           <--------HAHB4 <---------AHL20(1)                            ----------->GT1 <---------ATHB12          <---------YAB1  --------->AHL20(1)                          ---------->DOF2 --------->ICU4  ----------->GT1          <---------AHL20(2)                    ---------------------   gcaataattaggacacaaatggcaaaaccatcattttgttttatatatatttaaacccgcgaaacccattcgaggcagtcgaaagaaaacaaagaaaaaa  15808500          --------->DOF5.7(2)        ----------->GT1 ----------->GT1 -------->DOF2                                                   <---------YAB1 ---->ANAC58        <---------AHL20(2)              <---------CCA1(2)    --------->YAB1 ---->ANAC58   <---------AHL20(1)              <---------At4g35610    --------->YAB1 --->DAG2--------->TOE1(3)                     --------->At4g35610--------->AHL20(2) --->DOF2--------->TOE2(3)  <-----------GT1  <---------ZAT18  <---------AHL20(2)       <-----------GT1 --->ANAC81 <---------DOF5.7(2)         <-------GAMYB         --------->AHL20(2)<---------YAB1<------   gcaaagtaaatcgttaacatattttttttttttctacttgtgagttgtgagcttctatctctgttttattatttatcatgttatgtttttaaacttatta  15808600                                                           <---------YAB1                              --------->YAB1             --------->YAB1                              ------>ZmHOX2a(2)          <---------ICU4         <---------TOE1(3)  <---------ARR11(3)          --------->ICU4                <---------DAG2         <---------TOE2(3)  --------->ARR11(3)         --------->ARR11(3)       ---------->DOF2        <---------DOF5.7(2)--------->YAB1            <---------ZAT6    ------>ZmHOX2a(1)    --------- ---YAB1---------->DOF2  <---------KAN4(2)     <---------YAB1    --------->ARR11(3)   <----------DOF2   atacatgagttaaagttttgggagtagaatgatcttaatagagttgatgatgttagtgatcatgaattatctcctaagctaagaaagactttttgtagca  15808700                                                                                 <---------AHL20(2)                                                                        ------>MYB46(1)                                                        ----------->GT1 --------->MYB52(1)                                                    <---------TOE2(3) <---------MYB59                                                   ---------->DOF2 >>>>>>>>>>WRKY43            ---------->DOF2                      <---------YAB1    >>>>>>>>>>WRKY38              ----     --------->AHL20(2)  --------->YAB1      <----------DOF2       <---------WRKY18(1)       <------- ----------->GT1        <---------YAB1 --------->AHL20(2)----------->GT1------>MYB83  <---------TOE2(3) ->ID1   --------->AHL20(2)<---------YAB1   --------->TOE2(3)      >>>>>>>>>>WRKY26  --------->YAB1   ttttagttaaaataaaaagtttctatatcataaatatacaataaaacctttattaaagaagataaaacttgaccaaactgtattttataatgtttcttta  15808800                                                      --------->AHL20(2)                                             --------->ANAC58                                             --------->ANAC46                                             --------->ANAC58                                          --------->ZAT18                                         --------->ALFIN1                                        --------------->AtSPL8                                        <---------------AtSPL8                                        <---------------AtSPL3                                  <----------DOF2--------->AHL20(2)                        <---------ANAC55(2) <---------------------WRI1 ----->ANAC55(2)        ----------->GT1<---------ANAC46---------->DOF2                <-----------HVH21 ---DOF2  <-----------GT1--------->TOE2(3)--------->ZAT14*TSS<------ZmHOX2a(1)     ---------->DOF2   tgtattagttattaacaaaacaaaaaacgtaaattactttgaagtgtacgaaaaaataaaagaggaatcaattttcatatatagccaaagtcacatagtg  15808900                                  <---------ANAC58                                  <---------ANAC58                                       <----------DOF2                                 --------->ZAT2                                       --------->ARR11(3)            <---------CCA1(2)   --------->ANAC58      --------->ANAC46           --------->TOE2(3)          --------->YAB1        --------->ANAC58   --------->ZAT14              --------->ANAC46 <---         <---------ATHB12   --------->YAB1         <---------REM1(2)  <----------DOF2 <---------ARR11(3)       --------->WOX13(1)--------->YAB1 --------->ANAC46--------->ANAC46    <------ZmHOX2a(2) <------   attcttctccaatcaaatctctatcaacaatgacaagcttgcacaaaaccctcttcacacaaaatcccactactttagatcaacgtaagttctttttttc  15809000                        --------->WRKY18(1)                       <-----------HVH21                <---------MYB52(1)               --------->TOE2(3)               --------->TOE1(3)              ----------------->AGL1                                   --------->ANAC58              <---------ANAC46                                         --------->ANAC46              <---------ANAC55(2)                                    <---------ALFIN1        <---------AHL20(2)    <---------AHL20(2)                   <---------ALFIN1       <---------WOX13(1)     --------->AHL20(2)                   ----------->RAV1(1)   <---------MYB52(1)  <--------ZAP1                          <---------bZIP60(2)  --------->TOE2(3)   ----------->GT1                      --------->ICU4 -------DOF2  ----------->GT1--------->AHL20(2)          --------->YAB1--------->ANAC58  ----------->GT1 -----GT1--------->ATHB12<---------WRKY12           <---------MYB52(1)<---------LBD16   --------->AtLEC2   tttcccttaattgattacgttaatcggtcaaattaatagtggatgtgtgattttgttagtcatgatgtgccacacgggaagagacaattcatggaaaaaa  15809100                                         <---------TGA1a                                         <---------ANAC46                                         =========================================MYC_MYB                                      ----------->HVH21                                     ------->MYC4                                     ------->MYC2                                     <-------PIF5                                     ------->PIF5                                     <-------MYC4                                     <-------MYC2                                     ------->PIF4                                     ------->MYC3                                     <-------PIF4                                     <-------MYC3                                    --------->ANAC55(2)                --------->MYB52(1)                                    <---------ANAC55(2)                ------>NtERF2                                    --------->TGA1a                   --------->DEAR3(1)                                    <---------TGA1a                 ------>NtERF2                                    <---------O2                   --------->ANAC58                                    --------->O2                 <---------ATERF1(1)                                    ==============================================MYC_MYB                                    --------->ANAC58        <---------LBD16                        <-                                    --------->ANAC58  --------->DOF5.7(2) ------->GAMYB           <--                                ----------------->PIF3(1)--------->MYB46(3)                       ---                                ------>NtERF2      <------NtERF2--------->ARR14(2)               <---                               --------->ALFIN1  <---------DEAR3(1)--------->ANAC58         <--------                             <---------DEAR3(2) --------->SPL7--------->LBD16  --------->ICU4    ----                             <---------MYB46(3) --------->RAP2.6(3)--------->ANAC46    <---------ARR11(3)                            <---------DEAR3(1)  <---------ORA47(1)--------->ATERF1(1)  --------->ARR11(3)                         ----------->HVH21 --------->ALFIN1--------->MYB52(1)<---------At4g35610-----                     <-------TEIL<------NtERF2 <------ZmHOX2a(1)<---------ARR14(2)    <---------GLK1(1)   ctagaaaacatagacgaagaaggtccatcgacggtggcacgtgaagtgaggacggcgttaccaccggagacgccaacggagatgatggagttcttgggga  15809200                           --------->O2                           <---------TGA1a                  <------NtERF2                 ------>NtERF2               --------->ATERF1(1)               --------->RAP2.3(1)            <---------LBD16==================bZIP_DOF          <---------ARR14(2)                                       <----------DOF2                ---          --------->ARR14(2)                            <---------RAP2.6(3)                     -----         <---------GLK1(1) ==================bZIP_DOF  <---------ATERF1(2)                      ----- -----ZmHOX2a(2)--------->RAP2.3(3)                    --------->At1g77200                     ------ -------ARR11(3)--------->RAP2.3(2)                    --------->RAP2.6(2)                 --------->ZAT6 ------>ARR11(3)--------->DEAR3(1)<----------DOF2      --------->ATERF1(2)               <---------DOF5.7(2) ------GLK1(1)------>NtERF2--------->TGA1a             <---------ETT(2)                --------->DOF5.7(2) -LBD16  --------->GLK1(1) <---------O2  <-----------GT1------>NtERF2                 --------->TOE2(3) ----->GLK1(1)--------->LBD16     <---------DAG2       <---------ETT(1)               --------->TOE1(3) ------>ARR10--------->ANAC46  <---------ARR11(3) <---------At4g35610      <---------CCA1(2)  -------   gatcatggagcatttccgccgtcgaactcacgagagcttttttcaacaattccactgccgacactaactcttttcttctatctactatcgttaacaccaa  15809300                                      <---------ANAC58                                 <---------AtLEC2                        --------->GLK1(2)                       <---------GLK1(2)                       <---------ARR11(3)                       --------->ARR14(2)                       <---------ARR14(2) ------->DOF2         <---------HSFC1(2) ->MYB46(1)           --------->HSFC1(2)        ----------->HVH21 ->MYB83              <---------HSFB2a(1)     --------->O2 ----->RAV1(1)        --------->HSFB2a(1)     <---------O2                          --------->ZAT6 -->AtMYB61          ----------->ARR10<---------ANAC58                   ------>ZmHOX2a(1)   caaagaagacagagaagatgaagaagattctacttccatggcttcttctcgtgaccttgtaagtctactctcttcctattttctgaacactatttgttta  15809400  Previous    Next  AGI:  At4g32780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44042.1); contains InterPro domain Protein of unknown function DUF828, plant (InterPro:IPR008546) Range:  from: 15808857    to: 15810911    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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